RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 SFTPA1Q8IWL2 248 aa17.66■□□□□ 0.42
PHGDH-232ENST00000641947 DCLK2Q8N568 766 aa17.66■□□□□ 0.42
PHGDH-232ENST00000641947 TCP10LQ8TDR4 215 aa17.66■□□□□ 0.42
PHGDH-232ENST00000641947 FGF14Q92915 247 aa17.66■□□□□ 0.42
PHGDH-232ENST00000641947 NXPE3Q969Y0 559 aa17.66■□□□□ 0.42
PHGDH-232ENST00000641947 KXD1Q9BQD3 176 aa17.66■□□□□ 0.42
PHGDH-232ENST00000641947 POMKQ9H5K3 350 aa17.66■□□□□ 0.42
PHGDH-232ENST00000641947 ECT2Q9H8V3 914 aa17.66■□□□□ 0.42
PHGDH-232ENST00000641947 ZFP14Q9HCL3 533 aa17.66■□□□□ 0.42
PHGDH-232ENST00000641947 PCMTD2Q9NV79 361 aa17.66■□□□□ 0.42
PHGDH-232ENST00000641947 MARCH4Q9P2E8 410 aaPredicted RBP17.66■□□□□ 0.42
PHGDH-232ENST00000641947 BNIP3LO60238 219 aa17.66■□□□□ 0.42
PHGDH-232ENST00000641947 ALPIP09923 528 aa17.66■□□□□ 0.42
PHGDH-232ENST00000641947 CTPS1P17812 591 aa17.66■□□□□ 0.42
PHGDH-232ENST00000641947 PAMP19021 973 aa17.66■□□□□ 0.42
PHGDH-232ENST00000641947 POLR2EP19388 210 aaKnown RBP17.66■□□□□ 0.42
PHGDH-232ENST00000641947 PGGT1BP53609 377 aa17.66■□□□□ 0.42
PHGDH-232ENST00000641947 CSE1LP55060 971 aaKnown RBP17.66■□□□□ 0.42
PHGDH-232ENST00000641947 SULT2A1Q06520 285 aa17.66■□□□□ 0.42
PHGDH-232ENST00000641947 ACCSLQ4AC99 568 aa17.66■□□□□ 0.42
PHGDH-232ENST00000641947 NEPROQ6NW34 567 aa17.66■□□□□ 0.42
PHGDH-232ENST00000641947 PARM1Q6UWI2 310 aa17.66■□□□□ 0.42
PHGDH-232ENST00000641947 DPY19L3Q6ZPD9 716 aa17.66■□□□□ 0.42
PHGDH-232ENST00000641947 NLRP9Q7RTR0 991 aa17.66■□□□□ 0.42
PHGDH-232ENST00000641947 GLT6D1Q7Z4J2 308 aa17.66■□□□□ 0.42
PHGDH-232ENST00000641947 CMC1Q7Z7K0 106 aa17.66■□□□□ 0.42
PHGDH-232ENST00000641947 ZC3HC1Q86WB0 502 aaKnown RBP17.66■□□□□ 0.42
PHGDH-232ENST00000641947 RYBPQ8N488 228 aaPredicted RBP17.66■□□□□ 0.42
PHGDH-232ENST00000641947 TTC30BQ8N4P2 665 aa17.66■□□□□ 0.42
PHGDH-232ENST00000641947 CHST14Q8NCH0 376 aa17.66■□□□□ 0.42
PHGDH-232ENST00000641947 C2CD4AQ8NCU7 369 aaPredicted RBP17.66■□□□□ 0.42
PHGDH-232ENST00000641947 FRS2Q8WU20 508 aa17.66■□□□□ 0.42
PHGDH-232ENST00000641947 CHFRQ96EP1 664 aa17.66■□□□□ 0.42
PHGDH-232ENST00000641947 VPS39Q96JC1 886 aa17.66■□□□□ 0.42
PHGDH-232ENST00000641947 MSLNLQ96KJ4 702 aa17.66■□□□□ 0.42
PHGDH-232ENST00000641947 RPP25Q9BUL9 199 aaKnown RBP17.66■□□□□ 0.42
PHGDH-232ENST00000641947 ADGRE3Q9BY15 652 aa17.66■□□□□ 0.42
PHGDH-232ENST00000641947 CEP44Q9C0F1 390 aa17.66■□□□□ 0.42
PHGDH-232ENST00000641947 CAB39LQ9H9S4 337 aa17.66■□□□□ 0.42
PHGDH-232ENST00000641947 LMCD1Q9NZU5 365 aa17.66■□□□□ 0.42
PHGDH-232ENST00000641947 TXNDC16Q9P2K2 825 aa17.66■□□□□ 0.42
PHGDH-232ENST00000641947 HECAQ9UBI9 543 aaPredicted RBP17.66■□□□□ 0.42
PHGDH-232ENST00000641947 TTC34A8MYJ7 566 aa17.65■□□□□ 0.42
PHGDH-232ENST00000641947 PRRT4C9JH25 899 aa17.65■□□□□ 0.42
PHGDH-232ENST00000641947 GSRP00390 522 aa17.65■□□□□ 0.42
PHGDH-232ENST00000641947 SLC4A1P02730 911 aa17.65■□□□□ 0.42
PHGDH-232ENST00000641947 MAGEA12P43365 314 aa17.65■□□□□ 0.42
PHGDH-232ENST00000641947 CCNHP51946 323 aaPredicted RBP17.65■□□□□ 0.42
PHGDH-232ENST00000641947 SNRPD1P62314 119 aaKnown RBP17.65■□□□□ 0.42
PHGDH-232ENST00000641947 BCL2L1Q07817 233 aa17.65■□□□□ 0.42
PHGDH-232ENST00000641947 GRM3Q14832 879 aa17.65■□□□□ 0.42
PHGDH-232ENST00000641947 TAF1AQ15573 450 aaPredicted RBP17.65■□□□□ 0.42
PHGDH-232ENST00000641947 MYLK3Q32MK0 819 aa17.65■□□□□ 0.42
PHGDH-232ENST00000641947 ARMC12Q5T9G4 340 aa17.65■□□□□ 0.42
PHGDH-232ENST00000641947 CES5AQ6NT32 575 aa17.65■□□□□ 0.42
PHGDH-232ENST00000641947 EP400NLQ6ZTU2 488 aa17.65■□□□□ 0.42
PHGDH-232ENST00000641947 PTAR1Q7Z6K3 402 aaPredicted RBP17.65■□□□□ 0.42
PHGDH-232ENST00000641947 LDB1Q86U70 411 aaPredicted RBP17.65■□□□□ 0.42
PHGDH-232ENST00000641947 PCDH20Q8N6Y1 951 aaKnown RBP17.65■□□□□ 0.42
PHGDH-232ENST00000641947 TTC8Q8TAM2 541 aa17.65■□□□□ 0.42
PHGDH-232ENST00000641947 PTPRN2Q92932 1015 aa17.65■□□□□ 0.42
PHGDH-232ENST00000641947 ISL2Q96A47 359 aa17.65■□□□□ 0.42
PHGDH-232ENST00000641947 ALKBH8Q96BT7 664 aaKnown RBP17.65■□□□□ 0.42
PHGDH-232ENST00000641947 EID2BQ96D98 161 aa17.65■□□□□ 0.42
PHGDH-232ENST00000641947 MFSD1Q9H3U5 465 aa17.65■□□□□ 0.42
PHGDH-232ENST00000641947 MTG2Q9H4K7 406 aa17.65■□□□□ 0.42
PHGDH-232ENST00000641947 NKIRAS1Q9NYS0 192 aa17.65■□□□□ 0.42
PHGDH-232ENST00000641947 SLC27A6Q9Y2P4 619 aa17.65■□□□□ 0.42
PHGDH-232ENST00000641947 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.64■□□□□ 0.41
PHGDH-232ENST00000641947 CCDC162PA2VCL2 907 aa17.64■□□□□ 0.41
PHGDH-232ENST00000641947 SLC7A4O43246 635 aa17.64■□□□□ 0.41
PHGDH-232ENST00000641947 PRSS56P0CW18 603 aa17.64■□□□□ 0.41
PHGDH-232ENST00000641947 LAMP2P13473 410 aa17.64■□□□□ 0.41
PHGDH-232ENST00000641947 PSMA3P25788 255 aa17.64■□□□□ 0.41
PHGDH-232ENST00000641947 GBP2P32456 591 aaPredicted RBP17.64■□□□□ 0.41
PHGDH-232ENST00000641947 SPRP35270 261 aaPredicted RBP17.64■□□□□ 0.41
PHGDH-232ENST00000641947 KDSRQ06136 332 aa17.64■□□□□ 0.41
PHGDH-232ENST00000641947 THOC5Q13769 683 aaKnown RBP17.64■□□□□ 0.41
PHGDH-232ENST00000641947 PDE1CQ14123 709 aaPredicted RBP17.64■□□□□ 0.41
PHGDH-232ENST00000641947 SEMA3AQ14563 771 aa17.64■□□□□ 0.41
PHGDH-232ENST00000641947 COL19A1Q14993 1142 aa17.64■□□□□ 0.41
PHGDH-232ENST00000641947 CARD16Q5EG05 197 aa17.64■□□□□ 0.41
PHGDH-232ENST00000641947 PPM1JQ5JR12 505 aa17.64■□□□□ 0.41
PHGDH-232ENST00000641947 PHTF2Q8N3S3 785 aa17.64■□□□□ 0.41
PHGDH-232ENST00000641947 OR4K2Q8NGD2 314 aa17.64■□□□□ 0.41
PHGDH-232ENST00000641947 OR2A12Q8NGT7 310 aa17.64■□□□□ 0.41
PHGDH-232ENST00000641947 STYXQ8WUJ0 223 aa17.64■□□□□ 0.41
PHGDH-232ENST00000641947 PEX13Q92968 403 aa17.64■□□□□ 0.41
PHGDH-232ENST00000641947 SRPK1Q96SB4 655 aaKnown RBP17.64■□□□□ 0.41
PHGDH-232ENST00000641947 FAM167BQ9BTA0 163 aa17.64■□□□□ 0.41
PHGDH-232ENST00000641947 CIPCQ9C0C6 399 aa17.64■□□□□ 0.41
PHGDH-232ENST00000641947 CCDC134Q9H6E4 229 aa17.64■□□□□ 0.41
PHGDH-232ENST00000641947 ATP13A3Q9H7F0 1226 aa17.64■□□□□ 0.41
PHGDH-232ENST00000641947 FBXO6Q9NRD1 293 aaPredicted RBP17.64■□□□□ 0.41
PHGDH-232ENST00000641947 SNX15Q9NRS6 342 aa17.64■□□□□ 0.41
PHGDH-232ENST00000641947 NLE1Q9NVX2 485 aaPredicted RBP17.64■□□□□ 0.41
PHGDH-232ENST00000641947 POLR3BQ9NW08 1133 aaPredicted RBP17.64■□□□□ 0.41
PHGDH-232ENST00000641947 MKS1Q9NXB0 559 aa17.64■□□□□ 0.41
PHGDH-232ENST00000641947 GTSE1Q9NYZ3 720 aa17.64■□□□□ 0.41
PHGDH-232ENST00000641947 FBXO5Q9UKT4 447 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms