RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 EGFP01133 1207 aa10.35□□□□□ -0.75
PHGDH-224ENST00000641711 JCHAINP01591 159 aa10.35□□□□□ -0.75
PHGDH-224ENST00000641711 POLBP06746 335 aa10.35□□□□□ -0.75
PHGDH-224ENST00000641711 RHOCP08134 193 aa10.35□□□□□ -0.75
PHGDH-224ENST00000641711 SRPRAP08240 638 aaKnown RBP10.35□□□□□ -0.75
PHGDH-224ENST00000641711 DLDP09622 509 aaKnown RBP10.35□□□□□ -0.75
PHGDH-224ENST00000641711 CHRM1P11229 460 aaPredicted RBP10.35□□□□□ -0.75
PHGDH-224ENST00000641711 POLR2EP19388 210 aaKnown RBP10.35□□□□□ -0.75
PHGDH-224ENST00000641711 CD72P21854 359 aa10.35□□□□□ -0.75
PHGDH-224ENST00000641711 HOXA6P31267 233 aa10.35□□□□□ -0.75
PHGDH-224ENST00000641711 CRHR1P34998 444 aa10.35□□□□□ -0.75
PHGDH-224ENST00000641711 KIR2DL1P43626 348 aaPredicted RBP10.35□□□□□ -0.75
PHGDH-224ENST00000641711 SLC6A11P48066 632 aa10.35□□□□□ -0.75
PHGDH-224ENST00000641711 CCR3P51677 355 aa10.35□□□□□ -0.75
PHGDH-224ENST00000641711 SESN2P58004 480 aaPredicted RBP10.35□□□□□ -0.75
PHGDH-224ENST00000641711 LMAN2Q12907 356 aa10.35□□□□□ -0.75
PHGDH-224ENST00000641711 DBN1Q16643 649 aa10.35□□□□□ -0.75
PHGDH-224ENST00000641711 SPRED3Q2MJR0 410 aa10.35□□□□□ -0.75
PHGDH-224ENST00000641711 PARP15Q460N3 678 aa10.35□□□□□ -0.75
PHGDH-224ENST00000641711 EOGTQ5NDL2 527 aa10.35□□□□□ -0.75
PHGDH-224ENST00000641711 TIGD7Q6NT04 549 aaPredicted RBP10.35□□□□□ -0.75
PHGDH-224ENST00000641711 RWDD4Q6NW29 188 aaKnown RBP10.35□□□□□ -0.75
PHGDH-224ENST00000641711 CASC4Q6P4E1 433 aa10.35□□□□□ -0.75
PHGDH-224ENST00000641711 PACS1Q6VY07 963 aa10.35□□□□□ -0.75
PHGDH-224ENST00000641711 LINC00523Q86TU6 105 aa10.35□□□□□ -0.75
PHGDH-224ENST00000641711 TRIM42Q8IWZ5 723 aa10.35□□□□□ -0.75
PHGDH-224ENST00000641711 UMODL1-AS1Q8N2C9 162 aa10.35□□□□□ -0.75
PHGDH-224ENST00000641711 CNTD1Q8N815 330 aa10.35□□□□□ -0.75
PHGDH-224ENST00000641711 ZNF513Q8N8E2 541 aaPredicted RBP10.35□□□□□ -0.75
PHGDH-224ENST00000641711 NAT16Q8N8M0 369 aa10.35□□□□□ -0.75
PHGDH-224ENST00000641711 WFDC5Q8TCV5 224 aa10.35□□□□□ -0.75
PHGDH-224ENST00000641711 SPOCK2Q92563 424 aa10.35□□□□□ -0.75
PHGDH-224ENST00000641711 EZH1Q92800 747 aaPredicted RBP10.35□□□□□ -0.75
PHGDH-224ENST00000641711 BHMTQ93088 406 aa10.35□□□□□ -0.75
PHGDH-224ENST00000641711 MYEOVQ96EZ4 313 aa10.35□□□□□ -0.75
PHGDH-224ENST00000641711 FCRL5Q96RD9 977 aa10.35□□□□□ -0.75
PHGDH-224ENST00000641711 SRPK1Q96SB4 655 aaKnown RBP10.35□□□□□ -0.75
PHGDH-224ENST00000641711 KLF6Q99612 283 aaPredicted RBP10.35□□□□□ -0.75
PHGDH-224ENST00000641711 CEP41Q9BYV8 373 aa10.35□□□□□ -0.75
PHGDH-224ENST00000641711 MANSC1Q9H8J5 431 aa10.35□□□□□ -0.75
PHGDH-224ENST00000641711 LMAN1LQ9HAT1 526 aa10.35□□□□□ -0.75
PHGDH-224ENST00000641711 UGT1A7Q9HAW7 530 aa10.35□□□□□ -0.75
PHGDH-224ENST00000641711 UGT1A10Q9HAW8 530 aa10.35□□□□□ -0.75
PHGDH-224ENST00000641711 UGT1A8Q9HAW9 530 aa10.35□□□□□ -0.75
PHGDH-224ENST00000641711 SLC17A7Q9P2U7 560 aa10.35□□□□□ -0.75
PHGDH-224ENST00000641711 THAP10Q9P2Z0 257 aaPredicted RBP10.35□□□□□ -0.75
PHGDH-224ENST00000641711 MMP17Q9ULZ9 603 aa10.35□□□□□ -0.75
PHGDH-224ENST00000641711 AAR2Q9Y312 384 aaKnown RBP10.35□□□□□ -0.75
PHGDH-224ENST00000641711 PLXND1Q9Y4D7 1925 aa10.35□□□□□ -0.75
PHGDH-224ENST00000641711 SPAG17Q6Q759 2223 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 ARHGAP42A6NI28 874 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 MATN3O15232 486 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 MAFKO60675 156 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 RAMP2O60895 175 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 CNTN5O94779 1100 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 TGDSO95455 350 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 PDGFBP01127 241 aaPredicted RBP10.34□□□□□ -0.75
PHGDH-224ENST00000641711 CCNB1P14635 433 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 NFKB1P19838 968 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 AVPR2P30518 371 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 NTSR1P30989 418 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 CD70P32970 193 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 GP5P40197 560 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 SERPINB4P48594 390 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 NDST2P52849 883 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 GNA12Q03113 381 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 SLC20A2Q08357 652 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 GEN1Q17RS7 908 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 FUT11Q495W5 492 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 ALFQ53S48 1182 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 PITRM1Q5JRX3 1037 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 SPDYAQ5MJ70 313 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 GRTP1Q5TC63 336 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 MBLAC2Q68D91 279 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 NAPEPLDQ6IQ20 393 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 SDE2Q6IQ49 451 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 FAM47EQ6ZV65 393 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 SYT13Q7L8C5 426 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 OTOAQ7RTW8 1153 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 ADIPOR2Q86V24 386 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 CFAP52Q8N1V2 620 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 ATPAF2Q8N5M1 289 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 OR52K1Q8NGK4 314 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 RAB3IL1Q8TBN0 382 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 ISL2Q96A47 359 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 CERS2Q96G23 380 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 CELF6Q96J87 481 aaKnown RBP10.34□□□□□ -0.75
PHGDH-224ENST00000641711 AGAP3Q96P47 875 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 CPNE1Q99829 537 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 GABRG3Q99928 467 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 TRIM56Q9BRZ2 755 aaKnown RBP10.34□□□□□ -0.75
PHGDH-224ENST00000641711 FAM126AQ9BYI3 521 aaPredicted RBP10.34□□□□□ -0.75
PHGDH-224ENST00000641711 SLC39A8Q9C0K1 460 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 IL22Q9GZX6 179 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 FBRSL1Q9HCM7 1045 aaKnown RBP10.34□□□□□ -0.75
PHGDH-224ENST00000641711 SLCO1B3Q9NPD5 702 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 PRMT8Q9NR22 394 aaPredicted RBP10.34□□□□□ -0.75
PHGDH-224ENST00000641711 ABCF3Q9NUQ8 709 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 MPP6Q9NZW5 540 aa10.34□□□□□ -0.75
PHGDH-224ENST00000641711 VPS28Q9UK41 221 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms