RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 FAM46CQ5VWP2 391 aa8.81□□□□□ -1
HLA-B-258ENST00000640615 KIAA1211LQ6NV74 962 aa8.81□□□□□ -1
HLA-B-258ENST00000640615 PKN3Q6P5Z2 889 aa8.81□□□□□ -1
HLA-B-258ENST00000640615 BRAT1Q6PJG6 821 aa8.81□□□□□ -1
HLA-B-258ENST00000640615 CES3Q6UWW8 571 aa8.81□□□□□ -1
HLA-B-258ENST00000640615 C3orf62Q6ZUJ4 267 aa8.81□□□□□ -1
HLA-B-258ENST00000640615 TTC7BQ86TV6 843 aa8.81□□□□□ -1
HLA-B-258ENST00000640615 ALYREFQ86V81 257 aaKnown RBP8.81□□□□□ -1
HLA-B-258ENST00000640615 CCNJLQ8IV13 435 aa8.81□□□□□ -1
HLA-B-258ENST00000640615 MREGQ8N565 214 aa8.81□□□□□ -1
HLA-B-258ENST00000640615 OR2T3Q8NH03 318 aa8.81□□□□□ -1
HLA-B-258ENST00000640615 UHMK1Q8TAS1 419 aaKnown RBP8.81□□□□□ -1
HLA-B-258ENST00000640615 HCAR2Q8TDS4 363 aa8.81□□□□□ -1
HLA-B-258ENST00000640615 EDAQ92838 391 aa8.81□□□□□ -1
HLA-B-258ENST00000640615 PPP1R16AQ96I34 528 aa8.81□□□□□ -1
HLA-B-258ENST00000640615 TTC25Q96NG3 672 aa8.81□□□□□ -1
HLA-B-258ENST00000640615 RANBP9Q96S59 729 aa8.81□□□□□ -1
HLA-B-258ENST00000640615 NELL2Q99435 816 aa8.81□□□□□ -1
HLA-B-258ENST00000640615 WDR83Q9BRX9 315 aaKnown RBP8.81□□□□□ -1
HLA-B-258ENST00000640615 TRIM56Q9BRZ2 755 aaKnown RBP8.81□□□□□ -1
HLA-B-258ENST00000640615 NAT9Q9BTE0 207 aa8.81□□□□□ -1
HLA-B-258ENST00000640615 FOXQ1Q9C009 403 aa8.81□□□□□ -1
HLA-B-258ENST00000640615 RSPH9Q9H1X1 276 aaPredicted RBP8.81□□□□□ -1
HLA-B-258ENST00000640615 PABPC3Q9H361 631 aaKnown RBP8.81□□□□□ -1
HLA-B-258ENST00000640615 VPS37BQ9H9H4 285 aa8.81□□□□□ -1
HLA-B-258ENST00000640615 LRRC4CQ9HCJ2 640 aa8.81□□□□□ -1
HLA-B-258ENST00000640615 LTB4R2Q9NPC1 389 aa8.81□□□□□ -1
HLA-B-258ENST00000640615 DYRK4Q9NR20 520 aa8.81□□□□□ -1
HLA-B-258ENST00000640615 CHRAC1Q9NRG0 131 aa8.81□□□□□ -1
HLA-B-258ENST00000640615 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.81□□□□□ -1
HLA-B-258ENST00000640615 DKK3Q9UBP4 350 aa8.81□□□□□ -1
HLA-B-258ENST00000640615 SOX13Q9UN79 622 aa8.81□□□□□ -1
HLA-B-258ENST00000640615 MTF2Q9Y483 593 aaPredicted RBP8.81□□□□□ -1
HLA-B-258ENST00000640615 TCAF1Q9Y4C2 921 aa8.81□□□□□ -1
HLA-B-258ENST00000640615 SPO11Q9Y5K1 396 aa8.81□□□□□ -1
HLA-B-258ENST00000640615 KIAA1549LQ6ZVL6 1849 aa8.81□□□□□ -1
HLA-B-258ENST00000640615 KMT2EQ8IZD2 1858 aa8.81□□□□□ -1
HLA-B-258ENST00000640615 A0A1W2PQF6 199 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 TSPAN11A1L157 253 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 UPK3BL1B0FP48 263 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 UPK3BL2E5RIL1 263 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 PLK4O00444 970 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 RIPK2O43353 540 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 BUD23O43709 281 aaKnown RBP8.8□□□□□ -1
HLA-B-258ENST00000640615 CRTAMO95727 393 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 TTC4O95801 387 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 TSHRP16473 764 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 ITGB7P26010 798 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 SSTR1P30872 391 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 METAP1P53582 386 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 GPX6P59796 221 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 RPS14P62263 151 aaKnown RBP8.8□□□□□ -1
HLA-B-258ENST00000640615 FAM193AP78312 1265 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 ZXDAP98168 799 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 SATB1Q01826 763 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 SEMG2Q02383 582 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 MSLNQ13421 630 aaPredicted RBP8.8□□□□□ -1
HLA-B-258ENST00000640615 LAMB3Q13751 1172 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 UAP1Q16222 522 aaPredicted RBP8.8□□□□□ -1
HLA-B-258ENST00000640615 UGP2Q16851 508 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 LRRC73Q5JTD7 316 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 SPDYCQ5MJ68 293 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 UBAP2Q5T6F2 1119 aaKnown RBP8.8□□□□□ -1
HLA-B-258ENST00000640615 ZNF776Q68DI1 518 aaPredicted RBP8.8□□□□□ -1
HLA-B-258ENST00000640615 UNC5AQ6ZN44 842 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 Q6ZS52 159 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 USP45Q70EL2 814 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 PARS2Q7L3T8 475 aaKnown RBP8.8□□□□□ -1
HLA-B-258ENST00000640615 GLT6D1Q7Z4J2 308 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 CACUL1Q86Y37 369 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 ZNF687Q8N1G0 1237 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 SYNPOQ8N3V7 929 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 FLCNQ8NFG4 579 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 MDGA1Q8NFP4 955 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 BRSK1Q8TDC3 778 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 PTCD2Q8WV60 388 aaKnown RBP8.8□□□□□ -1
HLA-B-258ENST00000640615 ARRDC3Q96B67 414 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 ZNF669Q96BR6 464 aaPredicted RBP8.8□□□□□ -1
HLA-B-258ENST00000640615 SCRN2Q96FV2 425 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 SRPK1Q96SB4 655 aaKnown RBP8.8□□□□□ -1
HLA-B-258ENST00000640615 KIFC1Q9BW19 673 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 GPR63Q9BZJ6 419 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 TBC1D17Q9HA65 648 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 MRM3Q9HC36 420 aaKnown RBP8.8□□□□□ -1
HLA-B-258ENST00000640615 MAGEE1Q9HCI5 957 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 POLR3BQ9NW08 1133 aaPredicted RBP8.8□□□□□ -1
HLA-B-258ENST00000640615 HACD3Q9P035 362 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 MMP17Q9ULZ9 603 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 ZNF711Q9Y462 761 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 ARL5AQ9Y689 179 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 RPS6KL1Q9Y6S9 549 aa8.8□□□□□ -1
HLA-B-258ENST00000640615 A0A087WUV0 522 aaPredicted RBP8.79□□□□□ -1
HLA-B-258ENST00000640615 A0A0U1RQS6 177 aa8.79□□□□□ -1
HLA-B-258ENST00000640615 C1orf232A0A0U1RR37 186 aa8.79□□□□□ -1
HLA-B-258ENST00000640615 FAM237BA0A1B0GVD1 139 aa8.79□□□□□ -1
HLA-B-258ENST00000640615 MROH6A6NGR9 719 aa8.79□□□□□ -1
HLA-B-258ENST00000640615 CAPN8A6NHC0 703 aa8.79□□□□□ -1
HLA-B-258ENST00000640615 NPIPB15A6NHN6 443 aaPredicted RBP8.79□□□□□ -1
HLA-B-258ENST00000640615 C2orf81A6NN90 581 aa8.79□□□□□ -1
HLA-B-258ENST00000640615 AURKAO14965 403 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms