RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 TUBD1Q9UJT1 453 aa13.92□□□□□ -0.18
HLA-C-210ENST00000640219 PADI4Q9UM07 663 aa13.92□□□□□ -0.18
HLA-C-210ENST00000640219 ZFC3H1O60293 1989 aaKnown RBP13.91□□□□□ -0.18
HLA-C-210ENST00000640219 PRAMEF33A0A0G2JMD5 474 aa13.91□□□□□ -0.18
HLA-C-210ENST00000640219 KPNA3O00505 521 aaPredicted RBP13.91□□□□□ -0.18
HLA-C-210ENST00000640219 MAP2K7O14733 419 aa13.91□□□□□ -0.18
HLA-C-210ENST00000640219 PRAMEF10O60809 474 aa13.91□□□□□ -0.18
HLA-C-210ENST00000640219 ATP1A1P05023 1023 aaKnown RBP13.91□□□□□ -0.18
HLA-C-210ENST00000640219 SERPING1P05155 500 aa13.91□□□□□ -0.18
HLA-C-210ENST00000640219 TCP1P17987 556 aaKnown RBP13.91□□□□□ -0.18
HLA-C-210ENST00000640219 PAFAH1B1P43034 410 aa13.91□□□□□ -0.18
HLA-C-210ENST00000640219 NSFP46459 744 aaKnown RBP13.91□□□□□ -0.18
HLA-C-210ENST00000640219 RABIFP47224 123 aa13.91□□□□□ -0.18
HLA-C-210ENST00000640219 ASIC2Q16515 512 aa13.91□□□□□ -0.18
HLA-C-210ENST00000640219 CCDC14Q49A88 953 aa13.91□□□□□ -0.18
HLA-C-210ENST00000640219 ALFQ53S48 1182 aa13.91□□□□□ -0.18
HLA-C-210ENST00000640219 BEND6Q5SZJ8 279 aaPredicted RBP13.91□□□□□ -0.18
HLA-C-210ENST00000640219 ARTNQ5T4W7 220 aa13.91□□□□□ -0.18
HLA-C-210ENST00000640219 ESRP1Q6NXG1 681 aaKnown RBP13.91□□□□□ -0.18
HLA-C-210ENST00000640219 MON1BQ7L1V2 547 aa13.91□□□□□ -0.18
HLA-C-210ENST00000640219 ZNF571Q7Z3V5 609 aaPredicted RBP13.91□□□□□ -0.18
HLA-C-210ENST00000640219 RNF10Q8N5U6 811 aaKnown RBP13.91□□□□□ -0.18
HLA-C-210ENST00000640219 GOLGA6L1Q8N7Z2 621 aa13.91□□□□□ -0.18
HLA-C-210ENST00000640219 BTN2A2Q8WVV5 523 aa13.91□□□□□ -0.18
HLA-C-210ENST00000640219 TMEM74Q96NL1 305 aa13.91□□□□□ -0.18
HLA-C-210ENST00000640219 RPRD1AQ96P16 312 aaPredicted RBP13.91□□□□□ -0.18
HLA-C-210ENST00000640219 SYT11Q9BT88 431 aa13.91□□□□□ -0.18
HLA-C-210ENST00000640219 DYRK4Q9NR20 520 aa13.91□□□□□ -0.18
HLA-C-210ENST00000640219 MPP6Q9NZW5 540 aa13.91□□□□□ -0.18
HLA-C-210ENST00000640219 ADAM22Q9P0K1 906 aa13.91□□□□□ -0.18
HLA-C-210ENST00000640219 TRIM10Q9UDY6 481 aa13.91□□□□□ -0.18
HLA-C-210ENST00000640219 LOXL2Q9Y4K0 774 aa13.91□□□□□ -0.18
HLA-C-210ENST00000640219 SPTBN1Q01082 2364 aaKnown RBP13.9□□□□□ -0.18
HLA-C-210ENST00000640219 D6RAR5 112 aa13.9□□□□□ -0.18
HLA-C-210ENST00000640219 GCATO75600 419 aa13.9□□□□□ -0.18
HLA-C-210ENST00000640219 CTSLP07711 333 aa13.9□□□□□ -0.18
HLA-C-210ENST00000640219 ANXA6P08133 673 aa13.9□□□□□ -0.18
HLA-C-210ENST00000640219 PLEKP08567 350 aaPredicted RBP13.9□□□□□ -0.18
HLA-C-210ENST00000640219 ITIH1P19827 911 aa13.9□□□□□ -0.18
HLA-C-210ENST00000640219 CXCR3P49682 368 aa13.9□□□□□ -0.18
HLA-C-210ENST00000640219 VASPP50552 380 aaPredicted RBP13.9□□□□□ -0.18
HLA-C-210ENST00000640219 PLK1P53350 603 aa13.9□□□□□ -0.18
HLA-C-210ENST00000640219 RPL7AP62424 266 aaKnown RBP13.9□□□□□ -0.18
HLA-C-210ENST00000640219 C1orf61Q13536 156 aa13.9□□□□□ -0.18
HLA-C-210ENST00000640219 PDE1CQ14123 709 aaPredicted RBP13.9□□□□□ -0.18
HLA-C-210ENST00000640219 SLC25A52Q3SY17 297 aa13.9□□□□□ -0.18
HLA-C-210ENST00000640219 TMEM259Q4ZIN3 620 aa13.9□□□□□ -0.18
HLA-C-210ENST00000640219 CCDC181Q5TID7 509 aa13.9□□□□□ -0.18
HLA-C-210ENST00000640219 CXorf57Q6NSI4 855 aaKnown RBP13.9□□□□□ -0.18
HLA-C-210ENST00000640219 TFAP2DQ7Z6R9 452 aa13.9□□□□□ -0.18
HLA-C-210ENST00000640219 DTX1Q86Y01 620 aa13.9□□□□□ -0.18
HLA-C-210ENST00000640219 ZDHHC17Q8IUH5 632 aa13.9□□□□□ -0.18
HLA-C-210ENST00000640219 NT5C3BQ969T7 300 aa13.9□□□□□ -0.18
HLA-C-210ENST00000640219 PKNOX2Q96KN3 472 aa13.9□□□□□ -0.18
HLA-C-210ENST00000640219 SLC12A9Q9BXP2 914 aa13.9□□□□□ -0.18
HLA-C-210ENST00000640219 SLC17A9Q9BYT1 436 aa13.9□□□□□ -0.18
HLA-C-210ENST00000640219 WDCPQ9H6R7 721 aa13.9□□□□□ -0.18
HLA-C-210ENST00000640219 ARHGEF38Q9NXL2 777 aa13.9□□□□□ -0.18
HLA-C-210ENST00000640219 FOXJ2Q9P0K8 574 aa13.9□□□□□ -0.18
HLA-C-210ENST00000640219 STAP1Q9ULZ2 295 aa13.9□□□□□ -0.18
HLA-C-210ENST00000640219 FARP1Q9Y4F1 1045 aaPredicted RBP13.9□□□□□ -0.18
HLA-C-210ENST00000640219 HYOU1Q9Y4L1 999 aa13.9□□□□□ -0.18
HLA-C-210ENST00000640219 ICE1Q9Y2F5 2266 aa13.9□□□□□ -0.18
HLA-C-210ENST00000640219 TCRBV5S1A1TA0A578 114 aa13.89□□□□□ -0.19
HLA-C-210ENST00000640219 MACROD2A1Z1Q3 448 aa13.89□□□□□ -0.19
HLA-C-210ENST00000640219 C2CD4BA6NLJ0 364 aa13.89□□□□□ -0.19
HLA-C-210ENST00000640219 LMO7DNF2Z398 122 aa13.89□□□□□ -0.19
HLA-C-210ENST00000640219 AGRPO00253 132 aa13.89□□□□□ -0.19
HLA-C-210ENST00000640219 RAD51BO15315 384 aa13.89□□□□□ -0.19
HLA-C-210ENST00000640219 PJA2O43164 708 aa13.89□□□□□ -0.19
HLA-C-210ENST00000640219 KRT38O76015 456 aa13.89□□□□□ -0.19
HLA-C-210ENST00000640219 PAK4O96013 591 aaPredicted RBP13.89□□□□□ -0.19
HLA-C-210ENST00000640219 FERP16591 822 aa13.89□□□□□ -0.19
HLA-C-210ENST00000640219 RRM1P23921 792 aa13.89□□□□□ -0.19
HLA-C-210ENST00000640219 CCKBRP32239 447 aa13.89□□□□□ -0.19
HLA-C-210ENST00000640219 RFC1P35251 1148 aaPredicted RBP13.89□□□□□ -0.19
HLA-C-210ENST00000640219 NAP1L1P55209 391 aaKnown RBP13.89□□□□□ -0.19
HLA-C-210ENST00000640219 SNX16P57768 344 aa13.89□□□□□ -0.19
HLA-C-210ENST00000640219 CCL7P80098 99 aa13.89□□□□□ -0.19
HLA-C-210ENST00000640219 OGDHQ02218 1023 aa13.89□□□□□ -0.19
HLA-C-210ENST00000640219 EIF2B5Q13144 721 aaKnown RBP13.89□□□□□ -0.19
HLA-C-210ENST00000640219 FGL2Q14314 439 aa13.89□□□□□ -0.19
HLA-C-210ENST00000640219 PRRT3Q5FWE3 981 aa13.89□□□□□ -0.19
HLA-C-210ENST00000640219 BNIPLQ7Z465 357 aa13.89□□□□□ -0.19
HLA-C-210ENST00000640219 PHF13Q86YI8 300 aaPredicted RBP13.89□□□□□ -0.19
HLA-C-210ENST00000640219 ZNF683Q8IZ20 524 aa13.89□□□□□ -0.19
HLA-C-210ENST00000640219 RBFAQ8N0V3 343 aa13.89□□□□□ -0.19
HLA-C-210ENST00000640219 CCDC185Q8N715 623 aa13.89□□□□□ -0.19
HLA-C-210ENST00000640219 USP7Q93009 1102 aa13.89□□□□□ -0.19
HLA-C-210ENST00000640219 MCEEQ96PE7 176 aa13.89□□□□□ -0.19
HLA-C-210ENST00000640219 TRIM7Q9C029 511 aa13.89□□□□□ -0.19
HLA-C-210ENST00000640219 TCEAL2Q9H3H9 227 aaPredicted RBP13.89□□□□□ -0.19
HLA-C-210ENST00000640219 VIPAS39Q9H9C1 493 aa13.89□□□□□ -0.19
HLA-C-210ENST00000640219 ZNF71Q9NQZ8 489 aaPredicted RBP13.89□□□□□ -0.19
HLA-C-210ENST00000640219 GULP1Q9UBP9 304 aa13.89□□□□□ -0.19
HLA-C-210ENST00000640219 RNF14Q9UBS8 474 aa13.89□□□□□ -0.19
HLA-C-210ENST00000640219 APOBEC3BQ9UH17 382 aaKnown RBP13.89□□□□□ -0.19
HLA-C-210ENST00000640219 RABGEF1Q9UJ41 708 aa13.89□□□□□ -0.19
HLA-C-210ENST00000640219 BZW2Q9Y6E2 419 aaKnown RBP13.89□□□□□ -0.19
HLA-C-210ENST00000640219 FAM72CH0Y354 149 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms