RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 ZNF628Q5EBL2 1059 aa6.58□□□□□ -1.36
RFC1-217ENST00000639695 CXorf66Q5JRM2 361 aaPredicted RBP6.58□□□□□ -1.36
RFC1-217ENST00000639695 STRIP1Q5VSL9 837 aa6.58□□□□□ -1.36
RFC1-217ENST00000639695 C11orf88Q6PI97 169 aa6.58□□□□□ -1.36
RFC1-217ENST00000639695 LRIG3Q6UXM1 1119 aa6.58□□□□□ -1.36
RFC1-217ENST00000639695 MFSD6Q6ZSS7 791 aa6.58□□□□□ -1.36
RFC1-217ENST00000639695 CEP97Q8IW35 865 aa6.58□□□□□ -1.36
RFC1-217ENST00000639695 RNF168Q8IYW5 571 aaPredicted RBP6.58□□□□□ -1.36
RFC1-217ENST00000639695 MSANTD4Q8NCY6 345 aa6.58□□□□□ -1.36
RFC1-217ENST00000639695 OR6J1Q8NGC5 347 aa6.58□□□□□ -1.36
RFC1-217ENST00000639695 RASSF8Q8NHQ8 419 aa6.58□□□□□ -1.36
RFC1-217ENST00000639695 CAGE1Q8TC20 777 aa6.58□□□□□ -1.36
RFC1-217ENST00000639695 DUSP19Q8WTR2 217 aa6.58□□□□□ -1.36
RFC1-217ENST00000639695 LINC00476Q8WZB0 136 aa6.58□□□□□ -1.36
RFC1-217ENST00000639695 SIPA1Q96FS4 1042 aa6.58□□□□□ -1.36
RFC1-217ENST00000639695 HARBI1Q96MB7 349 aa6.58□□□□□ -1.36
RFC1-217ENST00000639695 CCDC106Q9BWC9 280 aa6.58□□□□□ -1.36
RFC1-217ENST00000639695 XAB2Q9HCS7 855 aaKnown RBP6.58□□□□□ -1.36
RFC1-217ENST00000639695 SYBUQ9NX95 663 aa6.58□□□□□ -1.36
RFC1-217ENST00000639695 CMAHPQ9Y471 501 aa6.58□□□□□ -1.36
RFC1-217ENST00000639695 MAU2Q9Y6X3 613 aa6.58□□□□□ -1.36
RFC1-217ENST00000639695 FLT1P17948 1338 aa6.57□□□□□ -1.36
RFC1-217ENST00000639695 A0A096LPK6 155 aa6.57□□□□□ -1.36
RFC1-217ENST00000639695 C17orf102A2RUQ5 167 aa6.57□□□□□ -1.36
RFC1-217ENST00000639695 H0Y626 953 aa6.57□□□□□ -1.36
RFC1-217ENST00000639695 RRHO14718 337 aa6.57□□□□□ -1.36
RFC1-217ENST00000639695 BAG2O95816 211 aa6.57□□□□□ -1.36
RFC1-217ENST00000639695 IFNAR1P17181 557 aa6.57□□□□□ -1.36
RFC1-217ENST00000639695 EDN2P20800 178 aa6.57□□□□□ -1.36
RFC1-217ENST00000639695 GPR12P47775 334 aa6.57□□□□□ -1.36
RFC1-217ENST00000639695 PTH2RP49190 550 aa6.57□□□□□ -1.36
RFC1-217ENST00000639695 SOX10P56693 466 aa6.57□□□□□ -1.36
RFC1-217ENST00000639695 SLC18A2Q05940 514 aa6.57□□□□□ -1.36
RFC1-217ENST00000639695 SNTB1Q13884 538 aaKnown RBP6.57□□□□□ -1.36
RFC1-217ENST00000639695 CRY2Q49AN0 593 aa6.57□□□□□ -1.36
RFC1-217ENST00000639695 AWAT1Q58HT5 328 aa6.57□□□□□ -1.36
RFC1-217ENST00000639695 IGSF11Q5DX21 431 aa6.57□□□□□ -1.36
RFC1-217ENST00000639695 ZNF362Q5T0B9 420 aaPredicted RBP6.57□□□□□ -1.36
RFC1-217ENST00000639695 TSTD2Q5T7W7 516 aa6.57□□□□□ -1.36
RFC1-217ENST00000639695 KRT79Q5XKE5 535 aa6.57□□□□□ -1.36
RFC1-217ENST00000639695 TBC1D9BQ66K14 1250 aa6.57□□□□□ -1.36
RFC1-217ENST00000639695 PLPPR4Q7Z2D5 763 aa6.57□□□□□ -1.36
RFC1-217ENST00000639695 METTL23Q86XA0 190 aa6.57□□□□□ -1.36
RFC1-217ENST00000639695 CADM3Q8N126 398 aa6.57□□□□□ -1.36
RFC1-217ENST00000639695 ZNF713Q8N859 430 aaPredicted RBP6.57□□□□□ -1.36
RFC1-217ENST00000639695 OR4N2Q8NGD1 307 aa6.57□□□□□ -1.36
RFC1-217ENST00000639695 WIPF2Q8TF74 440 aaPredicted RBP6.57□□□□□ -1.36
RFC1-217ENST00000639695 ATOH1Q92858 354 aaPredicted RBP6.57□□□□□ -1.36
RFC1-217ENST00000639695 PDLIM2Q96JY6 352 aa6.57□□□□□ -1.36
RFC1-217ENST00000639695 SEPT5Q99719 369 aaPredicted RBP6.57□□□□□ -1.36
RFC1-217ENST00000639695 PAPOLBQ9NRJ5 636 aaKnown RBP6.57□□□□□ -1.36
RFC1-217ENST00000639695 SETD4Q9NVD3 440 aa6.57□□□□□ -1.36
RFC1-217ENST00000639695 SH3BP4Q9P0V3 963 aa6.57□□□□□ -1.36
RFC1-217ENST00000639695 ANAPC2Q9UJX6 822 aa6.57□□□□□ -1.36
RFC1-217ENST00000639695 EXO1Q9UQ84 846 aaKnown RBP6.57□□□□□ -1.36
RFC1-217ENST00000639695 BTBD3Q9Y2F9 522 aa6.57□□□□□ -1.36
RFC1-217ENST00000639695 LSM4Q9Y4Z0 139 aaKnown RBP6.57□□□□□ -1.36
RFC1-217ENST00000639695 FNDC1Q4ZHG4 1894 aaPredicted RBP6.57□□□□□ -1.36
RFC1-217ENST00000639695 POLR2AP24928 1970 aaKnown RBP6.57□□□□□ -1.36
RFC1-217ENST00000639695 CYP2D7A0A087X1C5 515 aa6.56□□□□□ -1.36
RFC1-217ENST00000639695 TCRBV21S2A2A0A5A6 115 aa6.56□□□□□ -1.36
RFC1-217ENST00000639695 ADAMDEC1O15204 470 aa6.56□□□□□ -1.36
RFC1-217ENST00000639695 WDR46O15213 610 aaKnown RBP6.56□□□□□ -1.36
RFC1-217ENST00000639695 INPPL1O15357 1258 aa6.56□□□□□ -1.36
RFC1-217ENST00000639695 MTA2O94776 668 aa6.56□□□□□ -1.36
RFC1-217ENST00000639695 CD63P08962 238 aa6.56□□□□□ -1.36
RFC1-217ENST00000639695 ITGAXP20702 1163 aa6.56□□□□□ -1.36
RFC1-217ENST00000639695 CPT2P23786 658 aa6.56□□□□□ -1.36
RFC1-217ENST00000639695 RYKP34925 604 aa6.56□□□□□ -1.36
RFC1-217ENST00000639695 MATR3P43243 847 aaKnown RBP eCLIP6.56□□□□□ -1.36
RFC1-217ENST00000639695 ITGADQ13349 1161 aa6.56□□□□□ -1.36
RFC1-217ENST00000639695 CAMK2DQ13557 499 aa6.56□□□□□ -1.36
RFC1-217ENST00000639695 ALCAMQ13740 583 aa6.56□□□□□ -1.36
RFC1-217ENST00000639695 ZNF169Q14929 603 aaPredicted RBP6.56□□□□□ -1.36
RFC1-217ENST00000639695 USP41Q3LFD5 358 aa6.56□□□□□ -1.36
RFC1-217ENST00000639695 SYTL3Q4VX76 610 aa6.56□□□□□ -1.36
RFC1-217ENST00000639695 ODF2Q5BJF6 829 aa6.56□□□□□ -1.36
RFC1-217ENST00000639695 C6orf141Q5SZD1 244 aa6.56□□□□□ -1.36
RFC1-217ENST00000639695 PMS2CLQ68D20 193 aa6.56□□□□□ -1.36
RFC1-217ENST00000639695 NCAPH2Q6IBW4 605 aa6.56□□□□□ -1.36
RFC1-217ENST00000639695 CES5AQ6NT32 575 aa6.56□□□□□ -1.36
RFC1-217ENST00000639695 AAGABQ6PD74 315 aa6.56□□□□□ -1.36
RFC1-217ENST00000639695 PET117Q6UWS5 81 aa6.56□□□□□ -1.36
RFC1-217ENST00000639695 RD3Q7Z3Z2 195 aa6.56□□□□□ -1.36
RFC1-217ENST00000639695 CCDC91Q7Z6B0 441 aa6.56□□□□□ -1.36
RFC1-217ENST00000639695 CHCHD4Q8N4Q1 142 aa6.56□□□□□ -1.36
RFC1-217ENST00000639695 ARL14EPQ8N8R7 260 aaPredicted RBP6.56□□□□□ -1.36
RFC1-217ENST00000639695 PIGOQ8TEQ8 1089 aa6.56□□□□□ -1.36
RFC1-217ENST00000639695 DEPDC1BQ8WUY9 529 aa6.56□□□□□ -1.36
RFC1-217ENST00000639695 LRRC59Q96AG4 307 aaKnown RBP6.56□□□□□ -1.36
RFC1-217ENST00000639695 OTULINQ96BN8 352 aa6.56□□□□□ -1.36
RFC1-217ENST00000639695 RNF183Q96D59 192 aa6.56□□□□□ -1.36
RFC1-217ENST00000639695 DGAT2Q96PD7 388 aa6.56□□□□□ -1.36
RFC1-217ENST00000639695 SPAG5Q96R06 1193 aa6.56□□□□□ -1.36
RFC1-217ENST00000639695 PAFAH2Q99487 392 aa6.56□□□□□ -1.36
RFC1-217ENST00000639695 HGH1Q9BTY7 390 aa6.56□□□□□ -1.36
RFC1-217ENST00000639695 TM2D2Q9BX73 214 aa6.56□□□□□ -1.36
RFC1-217ENST00000639695 MRPL9Q9BYD2 267 aaKnown RBP6.56□□□□□ -1.36
RFC1-217ENST00000639695 OPA3Q9H6K4 179 aa6.56□□□□□ -1.36
RFC1-217ENST00000639695 ZNF304Q9HCX3 659 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms