RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 SPPL2CQ8IUH8 684 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 RBM12BQ8IXT5 1001 aaKnown RBP10.97□□□□□ -0.65
SNIP1-204ENST00000638725 BBS5Q8N3I7 341 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 ATPAF2Q8N5M1 289 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 LZTR1Q8N653 840 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 KLHL23Q8NBE8 558 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 SHCBP1Q8NEM2 672 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 MIPOL1Q8TD10 442 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 TRPC4APQ8TEL6 797 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 RNF34Q969K3 372 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 RHOBTB2Q9BYZ6 727 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 MROH8Q9H579 483 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 CNGB3Q9NQW8 809 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 ARMC1Q9NVT9 282 aa10.97□□□□□ -0.65
SNIP1-204ENST00000638725 A0A087WXM4 84 aa10.96□□□□□ -0.65
SNIP1-204ENST00000638725 MYBPHLA2RUH7 354 aa10.96□□□□□ -0.65
SNIP1-204ENST00000638725 ANXA9O76027 345 aa10.96□□□□□ -0.65
SNIP1-204ENST00000638725 SUPT7LO94864 414 aa10.96□□□□□ -0.65
SNIP1-204ENST00000638725 DARSP14868 501 aaKnown RBP10.96□□□□□ -0.65
SNIP1-204ENST00000638725 KCNE1P15382 129 aa10.96□□□□□ -0.65
SNIP1-204ENST00000638725 ADRA1AP35348 466 aa10.96□□□□□ -0.65
SNIP1-204ENST00000638725 ESRRGP62508 458 aa10.96□□□□□ -0.65
SNIP1-204ENST00000638725 KIF19Q2TAC6 998 aa10.96□□□□□ -0.65
SNIP1-204ENST00000638725 ANKDD1AQ495B1 522 aa10.96□□□□□ -0.65
SNIP1-204ENST00000638725 PM20D1Q6GTS8 502 aa10.96□□□□□ -0.65
SNIP1-204ENST00000638725 KIAA0930Q6ICG6 404 aaPredicted RBP10.96□□□□□ -0.65
SNIP1-204ENST00000638725 ELMSAN1Q6PJG2 1045 aa10.96□□□□□ -0.65
SNIP1-204ENST00000638725 HACD2Q6Y1H2 254 aa10.96□□□□□ -0.65
SNIP1-204ENST00000638725 BHLHA9Q7RTU4 235 aa10.96□□□□□ -0.65
SNIP1-204ENST00000638725 ERO1BQ86YB8 467 aa10.96□□□□□ -0.65
SNIP1-204ENST00000638725 ARHGAP12Q8IWW6 846 aa10.96□□□□□ -0.65
SNIP1-204ENST00000638725 PCED1BQ96HM7 432 aa10.96□□□□□ -0.65
SNIP1-204ENST00000638725 ADI1Q9BV57 179 aa10.96□□□□□ -0.65
SNIP1-204ENST00000638725 FSD1LQ9BXM9 530 aa10.96□□□□□ -0.65
SNIP1-204ENST00000638725 MUC3BQ9H195 1237 aa10.96□□□□□ -0.65
SNIP1-204ENST00000638725 PLGRKTQ9HBL7 147 aa10.96□□□□□ -0.65
SNIP1-204ENST00000638725 CCM2LQ9NUG4 571 aaPredicted RBP10.96□□□□□ -0.65
SNIP1-204ENST00000638725 MRGBPQ9NV56 204 aa10.96□□□□□ -0.65
SNIP1-204ENST00000638725 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.96□□□□□ -0.65
SNIP1-204ENST00000638725 PTGDR2Q9Y5Y4 395 aa10.96□□□□□ -0.65
SNIP1-204ENST00000638725 FNDC1Q4ZHG4 1894 aaPredicted RBP10.96□□□□□ -0.65
SNIP1-204ENST00000638725 TRIM64CA6NLI5 447 aa10.96□□□□□ -0.66
SNIP1-204ENST00000638725 PAMP19021 973 aa10.96□□□□□ -0.66
SNIP1-204ENST00000638725 GPX3P22352 226 aa10.96□□□□□ -0.66
SNIP1-204ENST00000638725 CCNCP24863 283 aa10.96□□□□□ -0.66
SNIP1-204ENST00000638725 KCNC1P48547 511 aa10.96□□□□□ -0.66
SNIP1-204ENST00000638725 GEMP55040 296 aa10.96□□□□□ -0.66
SNIP1-204ENST00000638725 STX1BP61266 288 aa10.96□□□□□ -0.66
SNIP1-204ENST00000638725 CAPRIN1Q14444 709 aaKnown RBP10.96□□□□□ -0.66
SNIP1-204ENST00000638725 PCSK7Q16549 785 aa10.96□□□□□ -0.66
SNIP1-204ENST00000638725 ZBED5Q49AG3 693 aa10.96□□□□□ -0.66
SNIP1-204ENST00000638725 ACBD5Q5T8D3 534 aaPredicted RBP10.96□□□□□ -0.66
SNIP1-204ENST00000638725 DCLRE1AQ6PJP8 1040 aa10.96□□□□□ -0.66
SNIP1-204ENST00000638725 MFSD2AQ8NA29 543 aa10.96□□□□□ -0.66
SNIP1-204ENST00000638725 CCDC126Q96EE4 140 aa10.96□□□□□ -0.66
SNIP1-204ENST00000638725 TRIM8Q9BZR9 551 aa10.96□□□□□ -0.66
SNIP1-204ENST00000638725 ALG9Q9H6U8 611 aa10.96□□□□□ -0.66
SNIP1-204ENST00000638725 VPS45Q9NRW7 570 aa10.96□□□□□ -0.66
SNIP1-204ENST00000638725 MAP10Q9P2G4 905 aa10.96□□□□□ -0.66
SNIP1-204ENST00000638725 A0A0J9YYE9 177 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 DHRS12A0PJE2 317 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 GABRDO14764 452 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 ATE1O95260 518 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 HLA-DQB2P05538 268 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 MMP3P08254 477 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 CHRM3P20309 590 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 MYF6P23409 242 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 OXTRP30559 389 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 CDH13P55290 713 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 MERTKQ12866 999 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 VPS26BQ4G0F5 336 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 UBXN11Q5T124 520 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 LDB1Q86U70 411 aaPredicted RBP10.95□□□□□ -0.66
SNIP1-204ENST00000638725 CAMK1DQ8IU85 385 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 EXT2Q93063 718 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 C19orf60Q96EN9 201 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 FBXL20Q96IG2 436 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 SLC45A3Q96JT2 553 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 MRGPRX2Q96LB1 330 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 IL12RB2Q99665 862 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 NEU3Q9UQ49 428 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 ZNF236Q9UL36 1845 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 RNF103-CHMP3A0A140T963 221 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 SH3PXD2BA1X283 911 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 MAFKO60675 156 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 F9P00740 461 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 RBP1P09455 135 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 CAPN3P20807 821 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 XKR4Q5GH76 650 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 RAB41Q5JT25 222 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 INTS11Q5TA45 600 aaKnown RBP10.95□□□□□ -0.66
SNIP1-204ENST00000638725 IRAK1BP1Q5VVH5 260 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 SMYD1Q8NB12 490 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 PCYOX1LQ8NBM8 494 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 SH3RF2Q8TEC5 729 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 CYGBQ8WWM9 190 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 EMID1Q96A84 441 aaPredicted RBP10.95□□□□□ -0.66
SNIP1-204ENST00000638725 ROPN1LQ96C74 230 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 ZFP42Q96MM3 310 aa10.95□□□□□ -0.66
SNIP1-204ENST00000638725 PLEKHG4BQ96PX9 1271 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms