RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 THEGLP0DJG4 465 aa21.89■■□□□ 1.09
SCN1B-206ENST00000638536 CTPS1P17812 591 aa21.89■■□□□ 1.09
SCN1B-206ENST00000638536 SDHBP21912 280 aa21.89■■□□□ 1.09
SCN1B-206ENST00000638536 CD86P42081 329 aa21.89■■□□□ 1.09
SCN1B-206ENST00000638536 POLR2LP62875 67 aaKnown RBP21.89■■□□□ 1.09
SCN1B-206ENST00000638536 SKOR1P84550 965 aa21.89■■□□□ 1.09
SCN1B-206ENST00000638536 OTUD4Q01804 1114 aaKnown RBP21.89■■□□□ 1.09
SCN1B-206ENST00000638536 NOMO1Q15155 1222 aa21.89■■□□□ 1.09
SCN1B-206ENST00000638536 ZNF423Q2M1K9 1284 aa21.89■■□□□ 1.09
SCN1B-206ENST00000638536 TPRG1LQ5T0D9 272 aa21.89■■□□□ 1.09
SCN1B-206ENST00000638536 LIPIQ6XZB0 460 aa21.89■■□□□ 1.09
SCN1B-206ENST00000638536 BZW1Q7L1Q6 419 aaKnown RBP21.89■■□□□ 1.09
SCN1B-206ENST00000638536 TP53I13Q8NBR0 393 aaPredicted RBP21.89■■□□□ 1.09
SCN1B-206ENST00000638536 ACTL9Q8TC94 416 aa21.89■■□□□ 1.09
SCN1B-206ENST00000638536 KLHDC7BQ96G42 594 aa21.89■■□□□ 1.09
SCN1B-206ENST00000638536 PDLIM2Q96JY6 352 aa21.89■■□□□ 1.09
SCN1B-206ENST00000638536 CAMK1GQ96NX5 476 aa21.89■■□□□ 1.09
SCN1B-206ENST00000638536 LENG8Q96PV6 779 aaPredicted RBP21.89■■□□□ 1.09
SCN1B-206ENST00000638536 TDRD1Q9BXT4 1180 aaKnown RBP21.89■■□□□ 1.09
SCN1B-206ENST00000638536 BRD8Q9H0E9 1235 aa21.89■■□□□ 1.09
SCN1B-206ENST00000638536 TM7SF3Q9NS93 570 aa21.89■■□□□ 1.09
SCN1B-206ENST00000638536 EFR3BQ9Y2G0 817 aa21.89■■□□□ 1.09
SCN1B-206ENST00000638536 TCRBV7S2A1N4TA0A589 114 aa21.88■■□□□ 1.09
SCN1B-206ENST00000638536 GIPC1O14908 333 aa21.88■■□□□ 1.09
SCN1B-206ENST00000638536 CER1O95813 267 aa21.88■■□□□ 1.09
SCN1B-206ENST00000638536 ALPIP09923 528 aa21.88■■□□□ 1.09
SCN1B-206ENST00000638536 CD68P34810 354 aaPredicted RBP21.88■■□□□ 1.09
SCN1B-206ENST00000638536 IGFALSP35858 605 aa21.88■■□□□ 1.09
SCN1B-206ENST00000638536 TEX44Q53QW1 395 aa21.88■■□□□ 1.09
SCN1B-206ENST00000638536 ARMC12Q5T9G4 340 aa21.88■■□□□ 1.09
SCN1B-206ENST00000638536 IL27RAQ6UWB1 636 aa21.88■■□□□ 1.09
SCN1B-206ENST00000638536 Q6ZSR6 202 aa21.88■■□□□ 1.09
SCN1B-206ENST00000638536 DPPA4Q7L190 304 aa21.88■■□□□ 1.09
SCN1B-206ENST00000638536 IQCHQ86VS3 1027 aa21.88■■□□□ 1.09
SCN1B-206ENST00000638536 UBL4BQ8N7F7 174 aa21.88■■□□□ 1.09
SCN1B-206ENST00000638536 ASB12Q8WXK4 309 aa21.88■■□□□ 1.09
SCN1B-206ENST00000638536 QKIQ96PU8 341 aaKnown RBP eCLIP21.88■■□□□ 1.09
SCN1B-206ENST00000638536 RBM15Q96T37 977 aaKnown RBP eCLIP21.88■■□□□ 1.09
SCN1B-206ENST00000638536 PHTF1Q9UMS5 762 aa21.88■■□□□ 1.09
SCN1B-206ENST00000638536 HS3ST3A1Q9Y663 406 aa21.88■■□□□ 1.09
SCN1B-206ENST00000638536 GOLGA4Q13439 2230 aaKnown RBP21.88■■□□□ 1.09
SCN1B-206ENST00000638536 NPIPB15A6NHN6 443 aaPredicted RBP21.88■■□□□ 1.09
SCN1B-206ENST00000638536 LHCGRP22888 699 aa21.88■■□□□ 1.09
SCN1B-206ENST00000638536 WSCD2Q2TBF2 565 aa21.88■■□□□ 1.09
SCN1B-206ENST00000638536 TSPAN33Q86UF1 283 aa21.88■■□□□ 1.09
SCN1B-206ENST00000638536 SPATA22Q8NHS9 363 aa21.88■■□□□ 1.09
SCN1B-206ENST00000638536 TEKT5Q96M29 485 aa21.88■■□□□ 1.09
SCN1B-206ENST00000638536 ELF4Q99607 663 aaPredicted RBP21.88■■□□□ 1.09
SCN1B-206ENST00000638536 GDF3Q9NR23 364 aa21.88■■□□□ 1.09
SCN1B-206ENST00000638536 SH3BP5O60239 455 aa21.87■■□□□ 1.09
SCN1B-206ENST00000638536 RBL1P28749 1068 aa21.87■■□□□ 1.09
SCN1B-206ENST00000638536 CNGA3Q16281 694 aa21.87■■□□□ 1.09
SCN1B-206ENST00000638536 SLC45A4Q5BKX6 768 aa21.87■■□□□ 1.09
SCN1B-206ENST00000638536 CCDC181Q5TID7 509 aa21.87■■□□□ 1.09
SCN1B-206ENST00000638536 DGLUCYQ7Z3D6 616 aa21.87■■□□□ 1.09
SCN1B-206ENST00000638536 PIP4P1Q86T03 277 aa21.87■■□□□ 1.09
SCN1B-206ENST00000638536 DEFB124Q8NES8 71 aa21.87■■□□□ 1.09
SCN1B-206ENST00000638536 SCRN2Q96FV2 425 aa21.87■■□□□ 1.09
SCN1B-206ENST00000638536 IMP4Q96G21 291 aaKnown RBP21.87■■□□□ 1.09
SCN1B-206ENST00000638536 PPIL1Q9Y3C6 166 aa21.87■■□□□ 1.09
SCN1B-206ENST00000638536 A0A1B0GTQ1 180 aa21.86■■□□□ 1.09
SCN1B-206ENST00000638536 F5H423 210 aaPredicted RBP21.86■■□□□ 1.09
SCN1B-206ENST00000638536 MT-CYBP00156 380 aaPredicted RBP21.86■■□□□ 1.09
SCN1B-206ENST00000638536 CES1P23141 567 aa21.86■■□□□ 1.09
SCN1B-206ENST00000638536 BNIP3Q12983 259 aa21.86■■□□□ 1.09
SCN1B-206ENST00000638536 KLF1Q13351 362 aaPredicted RBP21.86■■□□□ 1.09
SCN1B-206ENST00000638536 IRF4Q15306 451 aa21.86■■□□□ 1.09
SCN1B-206ENST00000638536 MEI1Q5TIA1 1274 aa21.86■■□□□ 1.09
SCN1B-206ENST00000638536 KDELC2Q7Z4H8 507 aa21.86■■□□□ 1.09
SCN1B-206ENST00000638536 PTAR1Q7Z6K3 402 aaPredicted RBP21.86■■□□□ 1.09
SCN1B-206ENST00000638536 ZSCAN30Q86W11 494 aa21.86■■□□□ 1.09
SCN1B-206ENST00000638536 ZNF567Q8N184 647 aa21.86■■□□□ 1.09
SCN1B-206ENST00000638536 PELI3Q8N2H9 469 aa21.86■■□□□ 1.09
SCN1B-206ENST00000638536 CBARPQ8N350 705 aaPredicted RBP21.86■■□□□ 1.09
SCN1B-206ENST00000638536 HTR3CQ8WXA8 447 aa21.86■■□□□ 1.09
SCN1B-206ENST00000638536 SKA1Q96BD8 255 aa21.86■■□□□ 1.09
SCN1B-206ENST00000638536 MCCC1Q96RQ3 725 aaPredicted RBP21.86■■□□□ 1.09
SCN1B-206ENST00000638536 GLOD4Q9HC38 313 aa21.86■■□□□ 1.09
SCN1B-206ENST00000638536 GPR27Q9NS67 375 aa21.86■■□□□ 1.09
SCN1B-206ENST00000638536 BTBD3Q9Y2F9 522 aa21.86■■□□□ 1.09
SCN1B-206ENST00000638536 R3HDM2Q9Y2K5 976 aaKnown RBP21.86■■□□□ 1.09
SCN1B-206ENST00000638536 H7C0C1 242 aa21.85■■□□□ 1.09
SCN1B-206ENST00000638536 LZTS3O60299 673 aaPredicted RBP21.85■■□□□ 1.09
SCN1B-206ENST00000638536 RECQL5O94762 991 aaPredicted RBP21.85■■□□□ 1.09
SCN1B-206ENST00000638536 ELFN1P0C7U0 828 aa21.85■■□□□ 1.09
SCN1B-206ENST00000638536 HNF1BP35680 557 aa21.85■■□□□ 1.09
SCN1B-206ENST00000638536 ATP5OP48047 213 aa21.85■■□□□ 1.09
SCN1B-206ENST00000638536 PFN3P60673 137 aa21.85■■□□□ 1.09
SCN1B-206ENST00000638536 OVGP1Q12889 678 aa21.85■■□□□ 1.09
SCN1B-206ENST00000638536 KYAT3Q6YP21 454 aaKnown RBP21.85■■□□□ 1.09
SCN1B-206ENST00000638536 GATAD2AQ86YP4 633 aa21.85■■□□□ 1.09
SCN1B-206ENST00000638536 DENND6BQ8NEG7 585 aa21.85■■□□□ 1.09
SCN1B-206ENST00000638536 TADA1Q96BN2 335 aa21.85■■□□□ 1.09
SCN1B-206ENST00000638536 SLC25A51Q9H1U9 297 aa21.85■■□□□ 1.09
SCN1B-206ENST00000638536 PCDH9Q9HC56 1237 aa21.85■■□□□ 1.09
SCN1B-206ENST00000638536 UBP1Q9NZI7 540 aa21.85■■□□□ 1.09
SCN1B-206ENST00000638536 A0A1W2PQ67 120 aa21.84■■□□□ 1.09
SCN1B-206ENST00000638536 A6NNZ2 444 aa21.84■■□□□ 1.09
SCN1B-206ENST00000638536 FPGTO14772 594 aa21.84■■□□□ 1.09
SCN1B-206ENST00000638536 TJP3O95049 919 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms