RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 SLC45A4Q5BKX6 768 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 PERM1Q5SV97 790 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 DCUN1D2Q6PH85 259 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 POLNQ7Z5Q5 900 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 PTAR1Q7Z6K3 402 aaPredicted RBP7.91□□□□□ -1.14
PNKP-229ENST00000637897 TTC7BQ86TV6 843 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 CBARPQ8N350 705 aaPredicted RBP7.91□□□□□ -1.14
PNKP-229ENST00000637897 RYBPQ8N488 228 aaPredicted RBP7.91□□□□□ -1.14
PNKP-229ENST00000637897 OXR1Q8N573 874 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 DCBLD1Q8N8Z6 715 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 FAM181AQ8N9Y4 354 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 PLA2G15Q8NCC3 412 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 FAM71BQ8TC56 605 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 LRRN4Q8WUT4 740 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 PTCD2Q8WV60 388 aaKnown RBP7.91□□□□□ -1.14
PNKP-229ENST00000637897 RAB7BQ96AH8 199 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 ZNF653Q96CK0 615 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 IFT43Q96FT9 208 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 PPP1R16AQ96I34 528 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 GDAP1L1Q96MZ0 367 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 EPAS1Q99814 870 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 WRAP53Q9BUR4 548 aaKnown RBP7.91□□□□□ -1.14
PNKP-229ENST00000637897 LRRC61Q9BV99 259 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 PACSIN1Q9BY11 444 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 SUV39H2Q9H5I1 410 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 PCDH12Q9NPG4 1184 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 DYRK4Q9NR20 520 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 UBA2Q9UBT2 640 aaPredicted RBP7.91□□□□□ -1.14
PNKP-229ENST00000637897 SAR1BQ9Y6B6 198 aa7.91□□□□□ -1.14
PNKP-229ENST00000637897 ARHGEF17Q96PE2 2063 aaPredicted RBP7.91□□□□□ -1.14
PNKP-229ENST00000637897 A0A087WV48 116 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 CTAGE15A4D2H0 777 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 ZSCAN5CA6NGD5 496 aaPredicted RBP7.9□□□□□ -1.14
PNKP-229ENST00000637897 EEF2KO00418 725 aaKnown RBP7.9□□□□□ -1.14
PNKP-229ENST00000637897 FGF10O15520 208 aaPredicted RBP7.9□□□□□ -1.14
PNKP-229ENST00000637897 LZTS3O60299 673 aaPredicted RBP7.9□□□□□ -1.14
PNKP-229ENST00000637897 MAFKO60675 156 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 CYP1A2P05177 515 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 C1SP09871 688 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 CTAGE8P0CG41 777 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 C6P13671 934 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 TGM2P21980 687 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 ITPKBP27987 946 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 PCK1P35558 622 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 MMP12P39900 470 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 CSNK1DP48730 415 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 HCAR3P49019 387 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 TAS2R40P59535 323 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 C1orf61Q13536 156 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 RTP5Q14D33 572 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 AGERQ15109 404 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 ERCC6LQ2NKX8 1250 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 ALG11Q2TAA5 492 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 SOWAHCQ53LP3 525 aaPredicted RBP7.9□□□□□ -1.14
PNKP-229ENST00000637897 GUSBP11Q6P575 273 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 ALKBH5Q6P6C2 394 aaKnown RBP7.9□□□□□ -1.14
PNKP-229ENST00000637897 RFLNAQ6ZTI6 216 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 SRLQ86TD4 932 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 CTAGE6Q86UF2 777 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 CTAGE4Q8IX94 777 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 CACTIN-AS1Q8N1I8 211 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 GALNT15Q8N3T1 639 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 PDCD7Q8N8D1 485 aaKnown RBP7.9□□□□□ -1.14
PNKP-229ENST00000637897 DENND6BQ8NEG7 585 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 HNRNPLLQ8WVV9 542 aaKnown RBP7.9□□□□□ -1.14
PNKP-229ENST00000637897 CASKIN2Q8WXE0 1202 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 SKA1Q96BD8 255 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 PRR11Q96HE9 360 aaPredicted RBP7.9□□□□□ -1.14
PNKP-229ENST00000637897 CALR3Q96L12 384 aaKnown RBP7.9□□□□□ -1.14
PNKP-229ENST00000637897 CSPG4P5Q96PW8 444 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 BOCQ9BWV1 1114 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 LGR4Q9BXB1 951 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 OSBPL1AQ9BXW6 950 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 CATSPERBQ9H7T0 1116 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 PCDH18Q9HCL0 1135 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 ARGLU1Q9NWB6 273 aaPredicted RBP7.9□□□□□ -1.14
PNKP-229ENST00000637897 DNAJC28Q9NX36 388 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 NLGN3Q9NZ94 848 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 RABGEF1Q9UJ41 708 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 TFR2Q9UP52 801 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 LHX6Q9UPM6 363 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 ST14Q9Y5Y6 855 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 DUSP10Q9Y6W6 482 aa7.9□□□□□ -1.14
PNKP-229ENST00000637897 A0A0A6YYK5 440 aaPredicted RBP7.89□□□□□ -1.15
PNKP-229ENST00000637897 YY2O15391 372 aa7.89□□□□□ -1.15
PNKP-229ENST00000637897 HTRA2O43464 458 aaPredicted RBP7.89□□□□□ -1.15
PNKP-229ENST00000637897 OPA1O60313 960 aa7.89□□□□□ -1.15
PNKP-229ENST00000637897 MAGEC1O60732 1142 aa7.89□□□□□ -1.15
PNKP-229ENST00000637897 TM7SF2O76062 418 aa7.89□□□□□ -1.15
PNKP-229ENST00000637897 IGSF6O95976 241 aa7.89□□□□□ -1.15
PNKP-229ENST00000637897 MT-CO3P00414 261 aa7.89□□□□□ -1.15
PNKP-229ENST00000637897 ATP1A1P05023 1023 aaKnown RBP7.89□□□□□ -1.15
PNKP-229ENST00000637897 TUBBP07437 444 aa7.89□□□□□ -1.15
PNKP-229ENST00000637897 H2AFZP0C0S5 128 aa7.89□□□□□ -1.15
PNKP-229ENST00000637897 JUPP14923 745 aa7.89□□□□□ -1.15
PNKP-229ENST00000637897 TSHRP16473 764 aa7.89□□□□□ -1.15
PNKP-229ENST00000637897 JUNDP17535 347 aa7.89□□□□□ -1.15
PNKP-229ENST00000637897 TCP1P17987 556 aaKnown RBP7.89□□□□□ -1.15
PNKP-229ENST00000637897 LHCGRP22888 699 aa7.89□□□□□ -1.15
PNKP-229ENST00000637897 HTR7P34969 479 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms