RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 Q8N9G6 341 aaPredicted RBP12.21□□□□□ -0.45
CACNA1A-250ENST00000637809 SGF29Q96ES7 293 aa12.21□□□□□ -0.45
CACNA1A-250ENST00000637809 WDR92Q96MX6 357 aa12.21□□□□□ -0.45
CACNA1A-250ENST00000637809 TUBGCP5Q96RT8 1024 aa12.21□□□□□ -0.45
CACNA1A-250ENST00000637809 CATSPERBQ9H7T0 1116 aa12.21□□□□□ -0.45
CACNA1A-250ENST00000637809 FGF22Q9HCT0 170 aa12.21□□□□□ -0.45
CACNA1A-250ENST00000637809 NLRC4Q9NPP4 1024 aa12.21□□□□□ -0.45
CACNA1A-250ENST00000637809 UBA2Q9UBT2 640 aaPredicted RBP12.21□□□□□ -0.45
CACNA1A-250ENST00000637809 PISDQ9UG56 409 aa12.21□□□□□ -0.45
CACNA1A-250ENST00000637809 DACH1Q9UI36 760 aa12.21□□□□□ -0.45
CACNA1A-250ENST00000637809 SIK3Q9Y2K2 1263 aa12.21□□□□□ -0.45
CACNA1A-250ENST00000637809 LOXL2Q9Y4K0 774 aa12.21□□□□□ -0.45
CACNA1A-250ENST00000637809 SPTA1P02549 2419 aa12.21□□□□□ -0.46
CACNA1A-250ENST00000637809 PRAMEF33A0A0G2JMD5 474 aa12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 FGF10O15520 208 aaPredicted RBP12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 PRAMEF10O60809 474 aa12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 RECQL5O94762 991 aaPredicted RBP12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 CALB1P05937 261 aa12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 JMJD7P0C870 316 aa12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 LIPCP11150 499 aa12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 PNLIPP16233 465 aa12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 GM2AP17900 193 aa12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 WT1P19544 449 aaPredicted RBP12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 ETV5P41161 510 aa12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 STAT1P42224 750 aa12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 CSNK1DP48730 415 aa12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 AIF1P55008 147 aa12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 KIAA1024LP59773 190 aa12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 RPL7AP62424 266 aaKnown RBP12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 KCNC4Q03721 635 aa12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 NFATC3Q12968 1075 aa12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 HLTFQ14527 1009 aaKnown RBP eCLIP12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 GRM3Q14832 879 aa12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 KRT31Q15323 416 aa12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 CT47A1Q5JQC4 288 aaPredicted RBP12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 SCYL2Q6P3W7 929 aa12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 SPRED1Q7Z699 444 aa12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 SLITRK4Q8IW52 837 aa12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 TSEN2Q8NCE0 465 aaKnown RBP12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 OR56A4Q8NGH8 313 aa12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 ATL2Q8NHH9 583 aa12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 ECHDC3Q96DC8 303 aa12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 CELF6Q96J87 481 aaKnown RBP12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 NSMCE3Q96MG7 304 aa12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 MCEEQ96PE7 176 aa12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 CNPY3Q9BT09 278 aa12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 TMEM168Q9H0V1 697 aa12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 VPS16Q9H269 839 aa12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 MRPL40Q9NQ50 206 aaKnown RBP12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 STARD5Q9NSY2 213 aa12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 FOXJ2Q9P0K8 574 aa12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 RNF215Q9Y6U7 377 aa12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 TLN1Q9Y490 2541 aaKnown RBP12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 KIF26BQ2KJY2 2108 aa12.2□□□□□ -0.46
CACNA1A-250ENST00000637809 C9orf172C9J069 976 aa12.19□□□□□ -0.46
CACNA1A-250ENST00000637809 ITGB2P05107 769 aa12.19□□□□□ -0.46
CACNA1A-250ENST00000637809 HOXC4P09017 264 aaPredicted RBP12.19□□□□□ -0.46
CACNA1A-250ENST00000637809 ITGB6P18564 788 aa12.19□□□□□ -0.46
CACNA1A-250ENST00000637809 TRIM23P36406 574 aa12.19□□□□□ -0.46
CACNA1A-250ENST00000637809 PAPOLAP51003 745 aaKnown RBP12.19□□□□□ -0.46
CACNA1A-250ENST00000637809 NDST2P52849 883 aa12.19□□□□□ -0.46
CACNA1A-250ENST00000637809 OGDHQ02218 1023 aa12.19□□□□□ -0.46
CACNA1A-250ENST00000637809 C14orf28Q4W4Y0 310 aa12.19□□□□□ -0.46
CACNA1A-250ENST00000637809 AFMIDQ63HM1 303 aa12.19□□□□□ -0.46
CACNA1A-250ENST00000637809 DNAJC24Q6P3W2 148 aa12.19□□□□□ -0.46
CACNA1A-250ENST00000637809 XKR5Q6UX68 686 aa12.19□□□□□ -0.46
CACNA1A-250ENST00000637809 LIPIQ6XZB0 460 aa12.19□□□□□ -0.46
CACNA1A-250ENST00000637809 USP53Q70EK8 1073 aa12.19□□□□□ -0.46
CACNA1A-250ENST00000637809 DTX1Q86Y01 620 aa12.19□□□□□ -0.46
CACNA1A-250ENST00000637809 PELI3Q8N2H9 469 aa12.19□□□□□ -0.46
CACNA1A-250ENST00000637809 FAM46DQ8NEK8 389 aa12.19□□□□□ -0.46
CACNA1A-250ENST00000637809 CCL4L1Q8NHW4 92 aa12.19□□□□□ -0.46
CACNA1A-250ENST00000637809 ENOX1Q8TC92 643 aaKnown RBP12.19□□□□□ -0.46
CACNA1A-250ENST00000637809 EXTL1Q92935 676 aa12.19□□□□□ -0.46
CACNA1A-250ENST00000637809 TMEM159Q96B96 161 aa12.19□□□□□ -0.46
CACNA1A-250ENST00000637809 LGR4Q9BXB1 951 aa12.19□□□□□ -0.46
CACNA1A-250ENST00000637809 SLC39A8Q9C0K1 460 aa12.19□□□□□ -0.46
CACNA1A-250ENST00000637809 LRIT1Q9P2V4 623 aa12.19□□□□□ -0.46
CACNA1A-250ENST00000637809 RELNP78509 3460 aa12.18□□□□□ -0.46
CACNA1A-250ENST00000637809 B4DGG1 531 aa12.18□□□□□ -0.46
CACNA1A-250ENST00000637809 CACNB4O00305 520 aaPredicted RBP12.18□□□□□ -0.46
CACNA1A-250ENST00000637809 TRAFD1O14545 582 aaPredicted RBP12.18□□□□□ -0.46
CACNA1A-250ENST00000637809 TNFRSF10CO14798 259 aa12.18□□□□□ -0.46
CACNA1A-250ENST00000637809 NUDT21O43809 227 aaKnown RBP12.18□□□□□ -0.46
CACNA1A-250ENST00000637809 HTR7P34969 479 aa12.18□□□□□ -0.46
CACNA1A-250ENST00000637809 CSRP3P50461 194 aa12.18□□□□□ -0.46
CACNA1A-250ENST00000637809 TPI1P60174 286 aa12.18□□□□□ -0.46
CACNA1A-250ENST00000637809 B4GALNT1Q00973 533 aa12.18□□□□□ -0.46
CACNA1A-250ENST00000637809 CA9Q16790 459 aa12.18□□□□□ -0.46
CACNA1A-250ENST00000637809 CFAP58Q5T655 872 aa12.18□□□□□ -0.46
CACNA1A-250ENST00000637809 SPECC1LQ69YQ0 1117 aa12.18□□□□□ -0.46
CACNA1A-250ENST00000637809 PRICKLE2Q7Z3G6 844 aa12.18□□□□□ -0.46
CACNA1A-250ENST00000637809 TAF8Q7Z7C8 310 aa12.18□□□□□ -0.46
CACNA1A-250ENST00000637809 SRLQ86TD4 932 aa12.18□□□□□ -0.46
CACNA1A-250ENST00000637809 VASH2Q86V25 355 aa12.18□□□□□ -0.46
CACNA1A-250ENST00000637809 C17orf82Q86X59 251 aaPredicted RBP12.18□□□□□ -0.46
CACNA1A-250ENST00000637809 ZFAND4Q86XD8 727 aa12.18□□□□□ -0.46
CACNA1A-250ENST00000637809 ARHGAP12Q8IWW6 846 aa12.18□□□□□ -0.46
CACNA1A-250ENST00000637809 USP7Q93009 1102 aa12.18□□□□□ -0.46
CACNA1A-250ENST00000637809 SEMA6CQ9H3T2 930 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms