RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 BCL2L1Q07817 233 aa18.57■□□□□ 0.56
CLN6-220ENST00000637450 IL10RBQ08334 325 aa18.57■□□□□ 0.56
CLN6-220ENST00000637450 SPIDRQ14159 915 aa18.57■□□□□ 0.56
CLN6-220ENST00000637450 PCSK4Q6UW60 755 aa18.57■□□□□ 0.56
CLN6-220ENST00000637450 GKN2Q86XP6 184 aa18.57■□□□□ 0.56
CLN6-220ENST00000637450 NPWQ8N729 165 aa18.57■□□□□ 0.56
CLN6-220ENST00000637450 KYQ8NBH2 561 aa18.57■□□□□ 0.56
CLN6-220ENST00000637450 PLA2G15Q8NCC3 412 aa18.57■□□□□ 0.56
CLN6-220ENST00000637450 WDR36Q8NI36 951 aaKnown RBP18.57■□□□□ 0.56
CLN6-220ENST00000637450 WDR92Q96MX6 357 aa18.57■□□□□ 0.56
CLN6-220ENST00000637450 CINPQ9BW66 212 aaPredicted RBP18.57■□□□□ 0.56
CLN6-220ENST00000637450 NAT10Q9H0A0 1025 aaKnown RBP18.57■□□□□ 0.56
CLN6-220ENST00000637450 SP110Q9HB58 689 aa18.57■□□□□ 0.56
CLN6-220ENST00000637450 SIRPGQ9P1W8 387 aa18.57■□□□□ 0.56
CLN6-220ENST00000637450 RABGEF1Q9UJ41 708 aa18.57■□□□□ 0.56
CLN6-220ENST00000637450 GPR34Q9UPC5 381 aa18.57■□□□□ 0.56
CLN6-220ENST00000637450 DGKBQ9Y6T7 804 aa18.57■□□□□ 0.56
CLN6-220ENST00000637450 SHROOM3Q8TF72 1996 aa18.57■□□□□ 0.56
CLN6-220ENST00000637450 HELZ2Q9BYK8 2649 aaKnown RBP18.56■□□□□ 0.56
CLN6-220ENST00000637450 ATMQ13315 3056 aa18.56■□□□□ 0.56
CLN6-220ENST00000637450 PMS2P1A4D2B8 440 aa18.56■□□□□ 0.56
CLN6-220ENST00000637450 CDRT15L2A8MXV6 281 aa18.56■□□□□ 0.56
CLN6-220ENST00000637450 DFFAO00273 331 aa18.56■□□□□ 0.56
CLN6-220ENST00000637450 TRAFD1O14545 582 aaPredicted RBP18.56■□□□□ 0.56
CLN6-220ENST00000637450 KLK10O43240 276 aa18.56■□□□□ 0.56
CLN6-220ENST00000637450 RECQL5O94762 991 aaPredicted RBP18.56■□□□□ 0.56
CLN6-220ENST00000637450 MBD3O95983 291 aa18.56■□□□□ 0.56
CLN6-220ENST00000637450 TNFP01375 233 aa18.56■□□□□ 0.56
CLN6-220ENST00000637450 PRKCIP41743 596 aa18.56■□□□□ 0.56
CLN6-220ENST00000637450 ZNF135P52742 658 aaPredicted RBP18.56■□□□□ 0.56
CLN6-220ENST00000637450 RALGDSQ12967 914 aa18.56■□□□□ 0.56
CLN6-220ENST00000637450 TCEA2Q15560 299 aa18.56■□□□□ 0.56
CLN6-220ENST00000637450 ASIC2Q16515 512 aa18.56■□□□□ 0.56
CLN6-220ENST00000637450 PPP6R3Q5H9R7 873 aaPredicted RBP18.56■□□□□ 0.56
CLN6-220ENST00000637450 KCTD16Q68DU8 428 aa18.56■□□□□ 0.56
CLN6-220ENST00000637450 LIPIQ6XZB0 460 aa18.56■□□□□ 0.56
CLN6-220ENST00000637450 CCDC74AQ96AQ1 378 aa18.56■□□□□ 0.56
CLN6-220ENST00000637450 NSMCE3Q96MG7 304 aa18.56■□□□□ 0.56
CLN6-220ENST00000637450 RBM15Q96T37 977 aaKnown RBP eCLIP18.56■□□□□ 0.562e-7■■■■□ 25.8
CLN6-220ENST00000637450 BPIFA3Q9BQP9 254 aa18.56■□□□□ 0.56
CLN6-220ENST00000637450 CPNE5Q9HCH3 593 aa18.56■□□□□ 0.56
CLN6-220ENST00000637450 CWC15Q9P013 229 aaKnown RBP18.56■□□□□ 0.56
CLN6-220ENST00000637450 CNOT8Q9UFF9 292 aaKnown RBP18.56■□□□□ 0.56
CLN6-220ENST00000637450 CFAP46Q8IYW2 2715 aa18.55■□□□□ 0.56
CLN6-220ENST00000637450 COL27A1Q8IZC6 1860 aaPredicted RBP18.55■□□□□ 0.56
CLN6-220ENST00000637450 CCDC187A0A096LP49 1063 aa18.55■□□□□ 0.56
CLN6-220ENST00000637450 DDX3XO00571 662 aaKnown RBP eCLIP18.55■□□□□ 0.562e-13■■■□□ 16.8
CLN6-220ENST00000637450 LRCH4O75427 683 aa18.55■□□□□ 0.56
CLN6-220ENST00000637450 HOXC4P09017 264 aaPredicted RBP18.55■□□□□ 0.56
CLN6-220ENST00000637450 GM2AP17900 193 aa18.55■□□□□ 0.56
CLN6-220ENST00000637450 TRIM23P36406 574 aa18.55■□□□□ 0.56
CLN6-220ENST00000637450 MLLT3P42568 568 aaPredicted RBP18.55■□□□□ 0.56
CLN6-220ENST00000637450 SCNN1BP51168 640 aa18.55■□□□□ 0.56
CLN6-220ENST00000637450 RENBPP51606 427 aa18.55■□□□□ 0.56
CLN6-220ENST00000637450 KIAA1024LP59773 190 aa18.55■□□□□ 0.56
CLN6-220ENST00000637450 DPYSQ14117 519 aa18.55■□□□□ 0.56
CLN6-220ENST00000637450 ANO6Q4KMQ2 910 aa18.55■□□□□ 0.56
CLN6-220ENST00000637450 ARHGAP40Q5TG30 622 aa18.55■□□□□ 0.56
CLN6-220ENST00000637450 E4F1Q66K89 784 aaPredicted RBP18.55■□□□□ 0.56
CLN6-220ENST00000637450 FOXR1Q6PIV2 292 aa18.55■□□□□ 0.56
CLN6-220ENST00000637450 DPPA4Q7L190 304 aa18.55■□□□□ 0.56
CLN6-220ENST00000637450 TP53INP2Q8IXH6 220 aa18.55■□□□□ 0.56
CLN6-220ENST00000637450 ARL14Q8N4G2 192 aa18.55■□□□□ 0.56
CLN6-220ENST00000637450 LZTR1Q8N653 840 aa18.55■□□□□ 0.56
CLN6-220ENST00000637450 OR6C4Q8NGE1 309 aa18.55■□□□□ 0.56
CLN6-220ENST00000637450 FUBP1Q96AE4 644 aaKnown RBP18.55■□□□□ 0.56
CLN6-220ENST00000637450 PSKH2Q96QS6 385 aa18.55■□□□□ 0.56
CLN6-220ENST00000637450 A0A1W2PQC6 194 aa18.54■□□□□ 0.56
CLN6-220ENST00000637450 TMEM202A6NGA9 273 aa18.54■□□□□ 0.56
CLN6-220ENST00000637450 SMTNL1A8MU46 457 aa18.54■□□□□ 0.56
CLN6-220ENST00000637450 ERVH48-1M5A8F1 160 aa18.54■□□□□ 0.56
CLN6-220ENST00000637450 CACNB4O00305 520 aaPredicted RBP18.54■□□□□ 0.56
CLN6-220ENST00000637450 TNFSF15O95150 251 aa18.54■□□□□ 0.56
CLN6-220ENST00000637450 ELFN1P0C7U0 828 aa18.54■□□□□ 0.56
CLN6-220ENST00000637450 PCK1P35558 622 aa18.54■□□□□ 0.56
CLN6-220ENST00000637450 AP1S1P61966 158 aa18.54■□□□□ 0.56
CLN6-220ENST00000637450 CCL7P80098 99 aa18.54■□□□□ 0.56
CLN6-220ENST00000637450 RHDQ02161 417 aa18.54■□□□□ 0.56
CLN6-220ENST00000637450 LBRQ14739 615 aaKnown RBP18.54■□□□□ 0.56
CLN6-220ENST00000637450 FILIP1LQ4L180 1135 aa18.54■□□□□ 0.56
CLN6-220ENST00000637450 OGFOD3Q6PK18 319 aa18.54■□□□□ 0.56
CLN6-220ENST00000637450 CLEC14AQ86T13 490 aa18.54■□□□□ 0.56
CLN6-220ENST00000637450 GPR156Q8NFN8 814 aa18.54■□□□□ 0.56
CLN6-220ENST00000637450 OR56A4Q8NGH8 313 aa18.54■□□□□ 0.56
CLN6-220ENST00000637450 SNRNP27Q8WVK2 155 aaKnown RBP18.54■□□□□ 0.56
CLN6-220ENST00000637450 OR1E3Q8WZA6 343 aa18.54■□□□□ 0.56
CLN6-220ENST00000637450 SPOCK2Q92563 424 aa18.54■□□□□ 0.56
CLN6-220ENST00000637450 ZNF653Q96CK0 615 aa18.54■□□□□ 0.56
CLN6-220ENST00000637450 CCDC97Q96F63 343 aaPredicted RBP18.54■□□□□ 0.56
CLN6-220ENST00000637450 PDXPQ96GD0 296 aa18.54■□□□□ 0.56
CLN6-220ENST00000637450 LIN37Q96GY3 246 aaPredicted RBP18.54■□□□□ 0.56
CLN6-220ENST00000637450 ZNF599Q96NL3 588 aa18.54■□□□□ 0.56
CLN6-220ENST00000637450 GFM1Q96RP9 751 aaKnown RBP18.54■□□□□ 0.56
CLN6-220ENST00000637450 SYNDIG1Q9H7V2 258 aa18.54■□□□□ 0.56
CLN6-220ENST00000637450 ZWILCHQ9H900 591 aa18.54■□□□□ 0.56
CLN6-220ENST00000637450 TMEM63CQ9P1W3 806 aa18.54■□□□□ 0.56
CLN6-220ENST00000637450 SEPT3Q9UH03 358 aa18.54■□□□□ 0.56
CLN6-220ENST00000637450 SCINQ9Y6U3 715 aa18.54■□□□□ 0.56
CLN6-220ENST00000637450 A0A1W2PQM1 296 aa18.53■□□□□ 0.56
CLN6-220ENST00000637450 TMX2-CTNND1H3BSU7 103 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms