RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 NMD3Q96D46 503 aaKnown RBP11.59□□□□□ -0.55
CLN6-217ENST00000636964 ABHD8Q96I13 439 aa11.59□□□□□ -0.55
CLN6-217ENST00000636964 MANSC1Q9H8J5 431 aa11.59□□□□□ -0.55
CLN6-217ENST00000636964 CAB39LQ9H9S4 337 aa11.59□□□□□ -0.55
CLN6-217ENST00000636964 ZNF334Q9HCZ1 680 aaPredicted RBP11.59□□□□□ -0.55
CLN6-217ENST00000636964 PLLPQ9Y342 182 aa11.59□□□□□ -0.55
CLN6-217ENST00000636964 CCDC195A0A1B0GUA6 201 aa11.58□□□□□ -0.55
CLN6-217ENST00000636964 GYG2O15488 501 aa11.58□□□□□ -0.55
CLN6-217ENST00000636964 PSMD3O43242 534 aa11.58□□□□□ -0.55
CLN6-217ENST00000636964 SAT1P21673 171 aa11.58□□□□□ -0.55
CLN6-217ENST00000636964 CRABP2P29373 138 aa11.58□□□□□ -0.55
CLN6-217ENST00000636964 SERPINB3P29508 390 aa11.58□□□□□ -0.55
CLN6-217ENST00000636964 MSLNQ13421 630 aaPredicted RBP11.58□□□□□ -0.55
CLN6-217ENST00000636964 SH2D4BQ5SQS7 431 aa11.58□□□□□ -0.55
CLN6-217ENST00000636964 TXNDC8Q6A555 127 aa11.58□□□□□ -0.55
CLN6-217ENST00000636964 IL31Q6EBC2 164 aa11.58□□□□□ -0.55
CLN6-217ENST00000636964 BPHLQ86WA6 291 aaPredicted RBP11.58□□□□□ -0.55
CLN6-217ENST00000636964 SIX5Q8N196 739 aa11.58□□□□□ -0.55
CLN6-217ENST00000636964 ACVR1CQ8NER5 493 aa11.58□□□□□ -0.55
CLN6-217ENST00000636964 ARMC5Q96C12 935 aa11.58□□□□□ -0.55
CLN6-217ENST00000636964 MTBPQ96DY7 904 aa11.58□□□□□ -0.55
CLN6-217ENST00000636964 ZBED2Q9BTP6 218 aa11.58□□□□□ -0.55
CLN6-217ENST00000636964 HERC2P3Q9BVR0 1158 aa11.58□□□□□ -0.55
CLN6-217ENST00000636964 MAGEB3O15480 346 aa11.58□□□□□ -0.56
CLN6-217ENST00000636964 FGF18O76093 207 aa11.58□□□□□ -0.56
CLN6-217ENST00000636964 VAPBO95292 243 aa11.58□□□□□ -0.56
CLN6-217ENST00000636964 ADRA1AP35348 466 aa11.58□□□□□ -0.56
CLN6-217ENST00000636964 MAP7Q14244 749 aa11.58□□□□□ -0.56
CLN6-217ENST00000636964 TMEM150AQ86TG1 271 aa11.58□□□□□ -0.56
CLN6-217ENST00000636964 RNF135Q8IUD6 432 aa11.58□□□□□ -0.56
CLN6-217ENST00000636964 CMTR2Q8IYT2 770 aaKnown RBP11.58□□□□□ -0.56
CLN6-217ENST00000636964 ARL14EPQ8N8R7 260 aaPredicted RBP11.58□□□□□ -0.56
CLN6-217ENST00000636964 SUN5Q8TC36 379 aa11.58□□□□□ -0.56
CLN6-217ENST00000636964 HIC2Q96JB3 615 aa11.58□□□□□ -0.56
CLN6-217ENST00000636964 MAELQ96JY0 434 aaKnown RBP11.58□□□□□ -0.56
CLN6-217ENST00000636964 PRICKLE1Q96MT3 831 aaPredicted RBP11.58□□□□□ -0.56
CLN6-217ENST00000636964 SLC25A51Q9H1U9 297 aa11.58□□□□□ -0.56
CLN6-217ENST00000636964 ZNF358Q9NW07 568 aa11.58□□□□□ -0.56
CLN6-217ENST00000636964 CXXC1Q9P0U4 656 aaPredicted RBP11.58□□□□□ -0.56
CLN6-217ENST00000636964 ARMCX1Q9P291 453 aa11.58□□□□□ -0.56
CLN6-217ENST00000636964 ITGB1BP2Q9UKP3 347 aa11.58□□□□□ -0.56
CLN6-217ENST00000636964 AGO1Q9UL18 857 aaKnown RBP11.58□□□□□ -0.56
CLN6-217ENST00000636964 MTO1Q9Y2Z2 717 aaKnown RBP11.58□□□□□ -0.56
CLN6-217ENST00000636964 INSL5Q9Y5Q6 135 aa11.58□□□□□ -0.56
CLN6-217ENST00000636964 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.58□□□□□ -0.56
CLN6-217ENST00000636964 MUSKO15146 869 aa11.58□□□□□ -0.56
CLN6-217ENST00000636964 VILLO15195 856 aa11.58□□□□□ -0.56
CLN6-217ENST00000636964 CNPP09543 421 aaKnown RBP11.58□□□□□ -0.56
CLN6-217ENST00000636964 CCDC159P0C7I6 412 aa11.58□□□□□ -0.56
CLN6-217ENST00000636964 MBL2P11226 248 aaPredicted RBP11.58□□□□□ -0.56
CLN6-217ENST00000636964 TYK2P29597 1187 aa11.58□□□□□ -0.56
CLN6-217ENST00000636964 GP5P40197 560 aa11.58□□□□□ -0.56
CLN6-217ENST00000636964 PDE1CQ14123 709 aaPredicted RBP11.58□□□□□ -0.56
CLN6-217ENST00000636964 DLG2Q15700 870 aa11.58□□□□□ -0.56
CLN6-217ENST00000636964 CNGA3Q16281 694 aa11.58□□□□□ -0.56
CLN6-217ENST00000636964 INAQ16352 499 aa11.58□□□□□ -0.56
CLN6-217ENST00000636964 HSF5Q4G112 596 aaPredicted RBP11.58□□□□□ -0.56
CLN6-217ENST00000636964 RANBP10Q6VN20 620 aa11.58□□□□□ -0.56
CLN6-217ENST00000636964 NSL1Q96IY1 281 aa11.58□□□□□ -0.56
CLN6-217ENST00000636964 MYRFLQ96LU7 910 aa11.58□□□□□ -0.56
CLN6-217ENST00000636964 CDK5RAP1Q96SZ6 601 aaKnown RBP11.58□□□□□ -0.56
CLN6-217ENST00000636964 VPS11Q9H270 941 aa11.58□□□□□ -0.56
CLN6-217ENST00000636964 ZNF395Q9H8N7 513 aaPredicted RBP11.58□□□□□ -0.56
CLN6-217ENST00000636964 GMEB1Q9Y692 573 aa11.58□□□□□ -0.56
CLN6-217ENST00000636964 MAGEB16A2A368 324 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 KIAA0355O15063 1070 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 MMP2P08253 660 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 DHRS4L1P0CG22 281 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 GJA1P17302 382 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 EPHB3P54753 998 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 PHEXP78562 749 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 HPCAP84074 193 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 CTBP1Q13363 440 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 C4orf46Q504U0 113 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 PCID2Q5JVF3 399 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 FSTL4Q6MZW2 842 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 PKN3Q6P5Z2 889 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 IMP4Q96G21 291 aaKnown RBP11.57□□□□□ -0.56
CLN6-217ENST00000636964 EXOC2Q96KP1 924 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 KIFC1Q9BW19 673 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 ENTPD7Q9NQZ7 604 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 PCDHB12Q9Y5F1 795 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 A0A0G2JND7 137 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 HAUS5O94927 633 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 EMP3P54852 163 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 ZXDBP98169 803 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 PARP15Q460N3 678 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 SFT2D3Q587I9 215 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 KDELC1Q6UW63 502 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 SPNS2Q8IVW8 549 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 DENND6AQ8IWF6 608 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 CPNE1Q99829 537 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 SEMA3CQ99985 751 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 FNIP2Q9P278 1114 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 UXTQ9UBK9 157 aaPredicted RBP11.57□□□□□ -0.56
CLN6-217ENST00000636964 PLA2G4CQ9UP65 541 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 PABPN1LA6NDY0 278 aaKnown RBP11.57□□□□□ -0.56
CLN6-217ENST00000636964 CCL22O00626 93 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 PRKCGP05129 697 aa11.57□□□□□ -0.56
CLN6-217ENST00000636964 PIM1P11309 404 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms