RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 MCM9Q9NXL9 1143 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 MPP6Q9NZW5 540 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 MALT1Q9UDY8 824 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.36□□□□□ -1.87
SRP54-214ENST00000630962 SIX4Q9UIU6 781 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 SLC13A4Q9UKG4 626 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 CDC14AQ9UNH5 594 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 GPR52Q9Y2T5 361 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 FAM96BQ9Y3D0 163 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 SNX9Q9Y5X1 595 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 DGKBQ9Y6T7 804 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 UTYO14607 1347 aa3.36□□□□□ -1.87
SRP54-214ENST00000630962 A0A0B4J293 547 aa3.35□□□□□ -1.87
SRP54-214ENST00000630962 TAF4O00268 1085 aa3.35□□□□□ -1.87
SRP54-214ENST00000630962 EIF3FO00303 357 aaPredicted RBP3.35□□□□□ -1.87
SRP54-214ENST00000630962 ZIC3O60481 467 aa3.35□□□□□ -1.87
SRP54-214ENST00000630962 CAMTA2O94983 1202 aa3.35□□□□□ -1.87
SRP54-214ENST00000630962 PMS2P2O95744 297 aa3.35□□□□□ -1.87
SRP54-214ENST00000630962 GALTP07902 379 aa3.35□□□□□ -1.87
SRP54-214ENST00000630962 ETFAP13804 333 aa3.35□□□□□ -1.87
SRP54-214ENST00000630962 AMD1P17707 334 aa3.35□□□□□ -1.87
SRP54-214ENST00000630962 XBP1P17861 261 aa3.35□□□□□ -1.87
SRP54-214ENST00000630962 CXCR3P49682 368 aa3.35□□□□□ -1.87
SRP54-214ENST00000630962 TERF1P54274 439 aa3.35□□□□□ -1.87
SRP54-214ENST00000630962 DDR1Q08345 913 aa3.35□□□□□ -1.87
SRP54-214ENST00000630962 ACSM2AQ08AH3 577 aa3.35□□□□□ -1.87
SRP54-214ENST00000630962 GPR68Q15743 365 aa3.35□□□□□ -1.87
SRP54-214ENST00000630962 ZNF628Q5EBL2 1059 aa3.35□□□□□ -1.87
SRP54-214ENST00000630962 GFI1BQ5VTD9 330 aa3.35□□□□□ -1.87
SRP54-214ENST00000630962 METTL2BQ6P1Q9 378 aaKnown RBP3.35□□□□□ -1.87
SRP54-214ENST00000630962 CYP26C1Q6V0L0 522 aa3.35□□□□□ -1.87
SRP54-214ENST00000630962 DSELQ8IZU8 1212 aa3.35□□□□□ -1.87
SRP54-214ENST00000630962 METTL27Q8N6F8 245 aaPredicted RBP3.35□□□□□ -1.87
SRP54-214ENST00000630962 POC1AQ8NBT0 407 aa3.35□□□□□ -1.87
SRP54-214ENST00000630962 NEXN-AS1Q8NBZ9 246 aa3.35□□□□□ -1.87
SRP54-214ENST00000630962 SECTM1Q8WVN6 248 aa3.35□□□□□ -1.87
SRP54-214ENST00000630962 RUFY2Q8WXA3 655 aa3.35□□□□□ -1.87
SRP54-214ENST00000630962 METTL2AQ96IZ6 378 aaKnown RBP3.35□□□□□ -1.87
SRP54-214ENST00000630962 SLITRK1Q96PX8 696 aa3.35□□□□□ -1.87
SRP54-214ENST00000630962 BBS4Q96RK4 519 aa3.35□□□□□ -1.87
SRP54-214ENST00000630962 FUZQ9BT04 418 aa3.35□□□□□ -1.87
SRP54-214ENST00000630962 GPR63Q9BZJ6 419 aa3.35□□□□□ -1.87
SRP54-214ENST00000630962 RANBP17Q9H2T7 1088 aaKnown RBP3.35□□□□□ -1.87
SRP54-214ENST00000630962 VEZTQ9HBM0 779 aa3.35□□□□□ -1.87
SRP54-214ENST00000630962 BPIFA1Q9NP55 256 aa3.35□□□□□ -1.87
SRP54-214ENST00000630962 TCF7L2Q9NQB0 619 aa3.35□□□□□ -1.87
SRP54-214ENST00000630962 SNTG1Q9NSN8 517 aa3.35□□□□□ -1.87
SRP54-214ENST00000630962 TMEM160Q9NX00 188 aa3.35□□□□□ -1.87
SRP54-214ENST00000630962 CISD1Q9NZ45 108 aaKnown RBP3.35□□□□□ -1.87
SRP54-214ENST00000630962 PCDHAC2Q9Y5I4 1007 aa3.35□□□□□ -1.87
SRP54-214ENST00000630962 A0A1W2PS18 150 aa3.34□□□□□ -1.87
SRP54-214ENST00000630962 BMPR1BO00238 502 aa3.34□□□□□ -1.87
SRP54-214ENST00000630962 PIP5K1CO60331 668 aa3.34□□□□□ -1.87
SRP54-214ENST00000630962 AGAP20933 346 aa3.34□□□□□ -1.87
SRP54-214ENST00000630962 CD72P21854 359 aa3.34□□□□□ -1.87
SRP54-214ENST00000630962 DGKAP23743 735 aa3.34□□□□□ -1.87
SRP54-214ENST00000630962 DLX5P56178 289 aa3.34□□□□□ -1.87
SRP54-214ENST00000630962 SEC61BP60468 96 aaKnown RBP3.34□□□□□ -1.87
SRP54-214ENST00000630962 RPP30P78346 268 aaKnown RBP3.34□□□□□ -1.87
SRP54-214ENST00000630962 GRSF1Q12849 480 aaKnown RBP eCLIP3.34□□□□□ -1.87
SRP54-214ENST00000630962 ZNF155Q12901 538 aaPredicted RBP3.34□□□□□ -1.87
SRP54-214ENST00000630962 BAK1Q16611 211 aa3.34□□□□□ -1.87
SRP54-214ENST00000630962 PLEKHA7Q6IQ23 1121 aa3.34□□□□□ -1.87
SRP54-214ENST00000630962 TRNP1Q6NT89 227 aa3.34□□□□□ -1.87
SRP54-214ENST00000630962 GDPD4Q6W3E5 623 aa3.34□□□□□ -1.87
SRP54-214ENST00000630962 SUGP1Q8IWZ8 645 aaKnown RBP3.34□□□□□ -1.87
SRP54-214ENST00000630962 SMAP1Q8IYB5 467 aaPredicted RBP3.34□□□□□ -1.87
SRP54-214ENST00000630962 CPXCR1Q8N123 301 aa3.34□□□□□ -1.87
SRP54-214ENST00000630962 MAB21L3Q8N8X9 362 aa3.34□□□□□ -1.87
SRP54-214ENST00000630962 CREB3L4Q8TEY5 395 aa3.34□□□□□ -1.87
SRP54-214ENST00000630962 TANKQ92844 425 aa3.34□□□□□ -1.87
SRP54-214ENST00000630962 MAELQ96JY0 434 aaKnown RBP3.34□□□□□ -1.87
SRP54-214ENST00000630962 UBXN10Q96LJ8 280 aa3.34□□□□□ -1.87
SRP54-214ENST00000630962 C3orf30Q96M34 536 aa3.34□□□□□ -1.87
SRP54-214ENST00000630962 PHF7Q9BWX1 381 aaPredicted RBP3.34□□□□□ -1.87
SRP54-214ENST00000630962 MAGEE1Q9HCI5 957 aa3.34□□□□□ -1.87
SRP54-214ENST00000630962 SLC25A10Q9UBX3 287 aaPredicted RBP3.34□□□□□ -1.87
SRP54-214ENST00000630962 POU2F3Q9UKI9 436 aa3.34□□□□□ -1.87
SRP54-214ENST00000630962 SCN5AQ14524 2016 aa3.34□□□□□ -1.88
SRP54-214ENST00000630962 NOTCH4Q99466 2003 aa3.34□□□□□ -1.88
SRP54-214ENST00000630962 FAM172BPA6NC97 362 aa3.33□□□□□ -1.88
SRP54-214ENST00000630962 HNRNPCL2B2RXH8 293 aa3.33□□□□□ -1.88
SRP54-214ENST00000630962 J3KR12 359 aa3.33□□□□□ -1.88
SRP54-214ENST00000630962 KLK8O60259 260 aa3.33□□□□□ -1.88
SRP54-214ENST00000630962 CLDN14O95500 239 aa3.33□□□□□ -1.88
SRP54-214ENST00000630962 TFP02787 698 aa3.33□□□□□ -1.88
SRP54-214ENST00000630962 ITGAXP20702 1163 aa3.33□□□□□ -1.88
SRP54-214ENST00000630962 USP8P40818 1118 aa3.33□□□□□ -1.88
SRP54-214ENST00000630962 PAFAH1B1P43034 410 aa3.33□□□□□ -1.88
SRP54-214ENST00000630962 CCR5P51681 352 aa3.33□□□□□ -1.88
SRP54-214ENST00000630962 CLCNKAP51800 687 aa3.33□□□□□ -1.88
SRP54-214ENST00000630962 CLDN2P57739 230 aa3.33□□□□□ -1.88
SRP54-214ENST00000630962 EEF1A1P68104 462 aaKnown RBP3.33□□□□□ -1.88
SRP54-214ENST00000630962 PPP2R5BQ15173 497 aa3.33□□□□□ -1.88
SRP54-214ENST00000630962 CTF1Q16619 201 aa3.33□□□□□ -1.88
SRP54-214ENST00000630962 EEF1A1P5Q5VTE0 462 aa3.33□□□□□ -1.88
SRP54-214ENST00000630962 GGNBP1Q5YKI7 109 aa3.33□□□□□ -1.88
SRP54-214ENST00000630962 SLC22A25Q6T423 547 aa3.33□□□□□ -1.88
SRP54-214ENST00000630962 GSTA5Q7RTV2 222 aa3.33□□□□□ -1.88
SRP54-214ENST00000630962 LNX1Q8TBB1 728 aaPredicted RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms