RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 RFX6Q8HWS3 928 aa11.18□□□□□ -0.62
DDX41-219ENST00000629036 LRRC8AQ8IWT6 810 aa11.18□□□□□ -0.62
DDX41-219ENST00000629036 CCDC13Q8IYE1 715 aa11.18□□□□□ -0.62
DDX41-219ENST00000629036 DENND6BQ8NEG7 585 aa11.18□□□□□ -0.62
DDX41-219ENST00000629036 OR13H1Q8NG92 308 aa11.18□□□□□ -0.62
DDX41-219ENST00000629036 PIH1D2Q8WWB5 315 aa11.18□□□□□ -0.62
DDX41-219ENST00000629036 SEMA3CQ99985 751 aa11.18□□□□□ -0.62
DDX41-219ENST00000629036 SLC17A9Q9BYT1 436 aa11.18□□□□□ -0.62
DDX41-219ENST00000629036 GAREM1Q9H706 876 aa11.18□□□□□ -0.62
DDX41-219ENST00000629036 BTBD3Q9Y2F9 522 aa11.18□□□□□ -0.62
DDX41-219ENST00000629036 COQ6Q9Y2Z9 468 aa11.18□□□□□ -0.62
DDX41-219ENST00000629036 PPIL1Q9Y3C6 166 aa11.18□□□□□ -0.62
DDX41-219ENST00000629036 PCDHGB2Q9Y5G2 931 aa11.18□□□□□ -0.62
DDX41-219ENST00000629036 HEY1Q9Y5J3 304 aa11.18□□□□□ -0.62
DDX41-219ENST00000629036 LAMA5O15230 3695 aa11.18□□□□□ -0.62
DDX41-219ENST00000629036 SMG1Q96Q15 3661 aaKnown RBP11.17□□□□□ -0.62
DDX41-219ENST00000629036 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.17□□□□□ -0.62
DDX41-219ENST00000629036 MACROD2A1Z1Q3 448 aa11.17□□□□□ -0.62
DDX41-219ENST00000629036 PCDHGA12O60330 932 aa11.17□□□□□ -0.62
DDX41-219ENST00000629036 CST8O60676 142 aa11.17□□□□□ -0.62
DDX41-219ENST00000629036 MMP20O60882 483 aa11.17□□□□□ -0.62
DDX41-219ENST00000629036 OPHN1O60890 802 aa11.17□□□□□ -0.62
DDX41-219ENST00000629036 ZRANB2O95218 330 aaKnown RBP eCLIP11.17□□□□□ -0.62
DDX41-219ENST00000629036 PGLSO95336 258 aa11.17□□□□□ -0.62
DDX41-219ENST00000629036 IPO7O95373 1038 aaKnown RBP11.17□□□□□ -0.62
DDX41-219ENST00000629036 CER1O95813 267 aa11.17□□□□□ -0.62
DDX41-219ENST00000629036 PAK4O96013 591 aaPredicted RBP11.17□□□□□ -0.62
DDX41-219ENST00000629036 PYGMP11217 842 aa11.17□□□□□ -0.62
DDX41-219ENST00000629036 C6P13671 934 aa11.17□□□□□ -0.62
DDX41-219ENST00000629036 TGM2P21980 687 aa11.17□□□□□ -0.62
DDX41-219ENST00000629036 RXRGP48443 463 aa11.17□□□□□ -0.62
DDX41-219ENST00000629036 SKOR1P84550 965 aa11.17□□□□□ -0.62
DDX41-219ENST00000629036 BCL2L1Q07817 233 aa11.17□□□□□ -0.62
DDX41-219ENST00000629036 OVGP1Q12889 678 aa11.17□□□□□ -0.62
DDX41-219ENST00000629036 SLC14A1Q13336 389 aa11.17□□□□□ -0.62
DDX41-219ENST00000629036 KLF1Q13351 362 aaPredicted RBP11.17□□□□□ -0.62
DDX41-219ENST00000629036 TEAD4Q15561 434 aa11.17□□□□□ -0.62
DDX41-219ENST00000629036 SOWAHCQ53LP3 525 aaPredicted RBP11.17□□□□□ -0.62
DDX41-219ENST00000629036 IL27RAQ6UWB1 636 aa11.17□□□□□ -0.62
DDX41-219ENST00000629036 NYAP1Q6ZVC0 841 aa11.17□□□□□ -0.62
DDX41-219ENST00000629036 KIAA1328Q86T90 577 aa11.17□□□□□ -0.62
DDX41-219ENST00000629036 TTC7BQ86TV6 843 aa11.17□□□□□ -0.62
DDX41-219ENST00000629036 RCOR2Q8IZ40 523 aa11.17□□□□□ -0.62
DDX41-219ENST00000629036 PELI3Q8N2H9 469 aa11.17□□□□□ -0.62
DDX41-219ENST00000629036 KIAA1524Q8TCG1 905 aa11.17□□□□□ -0.62
DDX41-219ENST00000629036 HES6Q96HZ4 224 aa11.17□□□□□ -0.62
DDX41-219ENST00000629036 FEM1CQ96JP0 617 aa11.17□□□□□ -0.62
DDX41-219ENST00000629036 CAMK1GQ96NX5 476 aa11.17□□□□□ -0.62
DDX41-219ENST00000629036 QKIQ96PU8 341 aaKnown RBP eCLIP11.17□□□□□ -0.62
DDX41-219ENST00000629036 TRIB3Q96RU7 358 aa11.17□□□□□ -0.62
DDX41-219ENST00000629036 GORASP1Q9BQQ3 440 aa11.17□□□□□ -0.62
DDX41-219ENST00000629036 WRAP53Q9BUR4 548 aaKnown RBP11.17□□□□□ -0.62
DDX41-219ENST00000629036 TDRD1Q9BXT4 1180 aaKnown RBP11.17□□□□□ -0.62
DDX41-219ENST00000629036 CEP41Q9BYV8 373 aa11.17□□□□□ -0.62
DDX41-219ENST00000629036 POLR1EQ9GZS1 481 aaKnown RBP11.17□□□□□ -0.62
DDX41-219ENST00000629036 ERVMER34-1Q9H9K5 563 aa11.17□□□□□ -0.62
DDX41-219ENST00000629036 SCUBE2Q9NQ36 999 aa11.17□□□□□ -0.62
DDX41-219ENST00000629036 MBNL1Q9NR56 388 aaKnown RBP11.17□□□□□ -0.62
DDX41-219ENST00000629036 AASDHPPTQ9NRN7 309 aa11.17□□□□□ -0.62
DDX41-219ENST00000629036 RBM22Q9NW64 420 aaKnown RBP eCLIP11.17□□□□□ -0.62
DDX41-219ENST00000629036 B4GALT6Q9UBX8 382 aa11.17□□□□□ -0.62
DDX41-219ENST00000629036 PACSIN2Q9UNF0 486 aaPredicted RBP11.17□□□□□ -0.62
DDX41-219ENST00000629036 HS3ST3A1Q9Y663 406 aa11.17□□□□□ -0.62
DDX41-219ENST00000629036 A0A0U1RQS6 177 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 CCDC66A2RUB6 948 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 CFAP69A5D8W1 941 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 NPIPB15A6NHN6 443 aaPredicted RBP11.16□□□□□ -0.62
DDX41-219ENST00000629036 HYAL3O43820 417 aaPredicted RBP11.16□□□□□ -0.62
DDX41-219ENST00000629036 FTCDO95954 541 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 JCHAINP01591 159 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 GIMD1P0DJR0 217 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 ZFXP17010 805 aaPredicted RBP11.16□□□□□ -0.62
DDX41-219ENST00000629036 PTPN3P26045 913 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 EPHA8P29322 1005 aaPredicted RBP11.16□□□□□ -0.62
DDX41-219ENST00000629036 AKT2P31751 481 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 CD68P34810 354 aaPredicted RBP11.16□□□□□ -0.62
DDX41-219ENST00000629036 NR2C2P49116 596 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 LIG3P49916 1009 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 COPS2P61201 443 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 ELP6Q0PNE2 266 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 KIF5AQ12840 1032 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 FZD2Q14332 565 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 PDK1Q15118 436 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 NOMO1Q15155 1222 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 IRF4Q15306 451 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 CNGA3Q16281 694 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 CDKN3Q16667 212 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 WSCD2Q2TBF2 565 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 UAP1L1Q3KQV9 507 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 PRAMEF14Q5SWL7 426 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 KCTD16Q68DU8 428 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 LIPIQ6XZB0 460 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 TSPAN33Q86UF1 283 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 NAXDQ8IW45 347 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 CCDC112Q8NEF3 446 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 DEFB124Q8NES8 71 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 SAP25Q8TEE9 199 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 IMP4Q96G21 291 aaKnown RBP11.16□□□□□ -0.62
DDX41-219ENST00000629036 RBM41Q96IZ5 413 aaKnown RBP11.16□□□□□ -0.62
DDX41-219ENST00000629036 PDLIM2Q96JY6 352 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms