RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 ATP6V1G2O95670 118 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 MT-CYBP00156 380 aaPredicted RBP12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 T-ENOLP0DO92 83 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 KPNA2P52292 529 aaKnown RBP12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 MXRA7P84157 204 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 PAFAH1B3Q15102 231 aaKnown RBP12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 PRSS36Q5K4E3 855 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 CEP68Q76N32 757 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 ZNF567Q8N184 647 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 UMODL1-AS1Q8N2C9 162 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 SLC44A3Q8N4M1 653 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 AFAP1L2Q8N4X5 818 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 NPWQ8N729 165 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 KLHL29Q96CT2 875 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 STAMBPL1Q96FJ0 436 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 KLHL32Q96NJ5 620 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 TBL1YQ9BQ87 522 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 SORCS3Q9UPU3 1222 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 RAI2Q9Y5P3 530 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 CFAP73A6NFT4 308 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 SDR42E2A6NKP2 422 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 K7ERQ8 282 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 KRT4P19013 534 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 PTPN3P26045 913 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 CNTFP26441 200 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 SEMG2Q02383 582 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 CDK18Q07002 472 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 CDH17Q12864 832 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 SLC10A2Q12908 348 aaPredicted RBP12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 GEN1Q17RS7 908 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 SDCCAG8Q86SQ7 713 aaPredicted RBP12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 SLC26A11Q86WA9 606 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 PTPRN2Q92932 1015 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 DCUN1D1Q96GG9 259 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 TLK1Q9UKI8 766 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 PHTF1Q9UMS5 762 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 ERVW-1Q9UQF0 538 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 DOCK6Q96HP0 2047 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 TCRBV9S1A1TA0A576 114 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 KDELR3O43731 214 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 ATG13O75143 517 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 HOXD9P28356 352 aaPredicted RBP12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 DPYSQ14117 519 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 ZNF284Q2VY69 593 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 EML3Q32P44 896 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 CARD16Q5EG05 197 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 EOGTQ5NDL2 527 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 PRPF39Q86UA1 669 aaKnown RBP12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 CAMK1DQ8IU85 385 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 TTC17Q96AE7 1141 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 HDAC11Q96DB2 347 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 CHFRQ96EP1 664 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 SERAC1Q96JX3 654 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 MTG2Q9H4K7 406 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 ANLNQ9NQW6 1124 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 CRLS1Q9UJA2 301 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 RPS6KL1Q9Y6S9 549 aa12.53□□□□□ -0.4
SYNGAP1-207ENST00000628646 DCLK1O15075 740 aa12.52□□□□□ -0.4
SYNGAP1-207ENST00000628646 HLA-FP30511 346 aa12.52□□□□□ -0.4
SYNGAP1-207ENST00000628646 CCNHP51946 323 aaPredicted RBP12.52□□□□□ -0.4
SYNGAP1-207ENST00000628646 NEK3P51956 506 aa12.52□□□□□ -0.4
SYNGAP1-207ENST00000628646 USP4Q13107 963 aa12.52□□□□□ -0.4
SYNGAP1-207ENST00000628646 EIF4HQ15056 248 aaKnown RBP12.52□□□□□ -0.4
SYNGAP1-207ENST00000628646 CTC1Q2NKJ3 1217 aa12.52□□□□□ -0.4
SYNGAP1-207ENST00000628646 ARSIQ5FYB1 569 aa12.52□□□□□ -0.4
SYNGAP1-207ENST00000628646 C22orf39Q6P5X5 142 aa12.52□□□□□ -0.4
SYNGAP1-207ENST00000628646 ZNF449Q6P9G9 518 aa12.52□□□□□ -0.4
SYNGAP1-207ENST00000628646 FAM47EQ6ZV65 393 aa12.52□□□□□ -0.4
SYNGAP1-207ENST00000628646 GLT6D1Q7Z4J2 308 aa12.52□□□□□ -0.4
SYNGAP1-207ENST00000628646 OR52K1Q8NGK4 314 aa12.52□□□□□ -0.4
SYNGAP1-207ENST00000628646 CXorf40AQ8TE69 158 aa12.52□□□□□ -0.4
SYNGAP1-207ENST00000628646 TM9SF1O15321 606 aa12.52□□□□□ -0.41
SYNGAP1-207ENST00000628646 INSIG1O15503 277 aa12.52□□□□□ -0.41
SYNGAP1-207ENST00000628646 CRTAMO95727 393 aa12.52□□□□□ -0.41
SYNGAP1-207ENST00000628646 POLBP06746 335 aa12.52□□□□□ -0.41
SYNGAP1-207ENST00000628646 KRT16P08779 473 aa12.52□□□□□ -0.41
SYNGAP1-207ENST00000628646 CYP2A6P11509 494 aaPredicted RBP12.52□□□□□ -0.41
SYNGAP1-207ENST00000628646 NQO1P15559 274 aaKnown RBP12.52□□□□□ -0.41
SYNGAP1-207ENST00000628646 GKP32189 559 aa12.52□□□□□ -0.41
SYNGAP1-207ENST00000628646 ELK3P41970 407 aa12.52□□□□□ -0.41
SYNGAP1-207ENST00000628646 PPIDQ08752 370 aaKnown RBP12.52□□□□□ -0.41
SYNGAP1-207ENST00000628646 GALNT2Q10471 571 aa12.52□□□□□ -0.41
SYNGAP1-207ENST00000628646 BHLHA9Q7RTU4 235 aa12.52□□□□□ -0.41
SYNGAP1-207ENST00000628646 BNIPLQ7Z465 357 aa12.52□□□□□ -0.41
SYNGAP1-207ENST00000628646 OR2AP1Q8NGE2 309 aa12.52□□□□□ -0.41
SYNGAP1-207ENST00000628646 ATXN7L3BQ96GX2 97 aa12.52□□□□□ -0.41
SYNGAP1-207ENST00000628646 MYO19Q96H55 970 aa12.52□□□□□ -0.41
SYNGAP1-207ENST00000628646 PRICKLE1Q96MT3 831 aaPredicted RBP12.52□□□□□ -0.41
SYNGAP1-207ENST00000628646 SLC17A7Q9P2U7 560 aa12.52□□□□□ -0.41
SYNGAP1-207ENST00000628646 USH1CQ9Y6N9 552 aa12.52□□□□□ -0.41
SYNGAP1-207ENST00000628646 MYO18AQ92614 2054 aaKnown RBP12.52□□□□□ -0.41
SYNGAP1-207ENST00000628646 BCLAF3A2AJT9 711 aaKnown RBP12.52□□□□□ -0.41
SYNGAP1-207ENST00000628646 ZNF487B1APH4 448 aa12.52□□□□□ -0.41
SYNGAP1-207ENST00000628646 MT-CO1P00395 513 aa12.52□□□□□ -0.41
SYNGAP1-207ENST00000628646 CTHP32929 405 aa12.52□□□□□ -0.41
SYNGAP1-207ENST00000628646 SLC18A2Q05940 514 aa12.52□□□□□ -0.41
SYNGAP1-207ENST00000628646 TSTA3Q13630 321 aaPredicted RBP12.52□□□□□ -0.41
SYNGAP1-207ENST00000628646 LAMB3Q13751 1172 aa12.52□□□□□ -0.41
SYNGAP1-207ENST00000628646 CES4AQ5XG92 561 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms