RNA–Protein interactions for RNA: ENST00000628579.1

TMCO1-209, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 5 BASIC

Gene TMCO1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-209ENST00000628579 PTK2BQ14289 1009 aa10.54□□□□□ -0.72
TMCO1-209ENST00000628579 IHHQ14623 411 aa10.54□□□□□ -0.72
TMCO1-209ENST00000628579 PAFAH1B3Q15102 231 aaKnown RBP10.54□□□□□ -0.72
TMCO1-209ENST00000628579 PDK2Q15119 407 aa10.54□□□□□ -0.72
TMCO1-209ENST00000628579 HS1BP3Q53T59 392 aa10.54□□□□□ -0.72
TMCO1-209ENST00000628579 PRRT3Q5FWE3 981 aa10.54□□□□□ -0.72
TMCO1-209ENST00000628579 FAM182AQ5T1J6 154 aa10.54□□□□□ -0.72
TMCO1-209ENST00000628579 SARM1Q6SZW1 724 aa10.54□□□□□ -0.72
TMCO1-209ENST00000628579 MACC1Q6ZN28 852 aa10.54□□□□□ -0.72
TMCO1-209ENST00000628579 TMPRSS12Q86WS5 348 aa10.54□□□□□ -0.72
TMCO1-209ENST00000628579 PROSER1Q86XN7 944 aa10.54□□□□□ -0.72
TMCO1-209ENST00000628579 CNGA4Q8IV77 575 aa10.54□□□□□ -0.72
TMCO1-209ENST00000628579 PHACTR4Q8IZ21 702 aa10.54□□□□□ -0.72
TMCO1-209ENST00000628579 PELI3Q8N2H9 469 aa10.54□□□□□ -0.72
TMCO1-209ENST00000628579 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.54□□□□□ -0.72
TMCO1-209ENST00000628579 FUBP1Q96AE4 644 aaKnown RBP10.54□□□□□ -0.72
TMCO1-209ENST00000628579 FAF2Q96CS3 445 aa10.54□□□□□ -0.72
TMCO1-209ENST00000628579 LRRC61Q9BV99 259 aa10.54□□□□□ -0.72
TMCO1-209ENST00000628579 TRIM5Q9C035 493 aa10.54□□□□□ -0.72
TMCO1-209ENST00000628579 CCDC86Q9H6F5 360 aaKnown RBP10.54□□□□□ -0.72
TMCO1-209ENST00000628579 B4GALT6Q9UBX8 382 aa10.54□□□□□ -0.72
TMCO1-209ENST00000628579 APOBEC3BQ9UH17 382 aaKnown RBP10.54□□□□□ -0.72
TMCO1-209ENST00000628579 LRP4O75096 1905 aa10.54□□□□□ -0.72
TMCO1-209ENST00000628579 MYLKQ15746 1914 aa10.54□□□□□ -0.72
TMCO1-209ENST00000628579 PKD1L2Q7Z442 2459 aa10.53□□□□□ -0.72
TMCO1-209ENST00000628579 LRRD1A4D1F6 860 aa10.53□□□□□ -0.72
TMCO1-209ENST00000628579 NPIPB15A6NHN6 443 aaPredicted RBP10.53□□□□□ -0.72
TMCO1-209ENST00000628579 C3orf70A6NLC5 250 aaPredicted RBP10.53□□□□□ -0.72
TMCO1-209ENST00000628579 SOCS5O75159 536 aa10.53□□□□□ -0.72
TMCO1-209ENST00000628579 CPP00450 1065 aa10.53□□□□□ -0.72
TMCO1-209ENST00000628579 PDHA1P08559 390 aa10.53□□□□□ -0.72
TMCO1-209ENST00000628579 ALPPL2P10696 532 aa10.53□□□□□ -0.72
TMCO1-209ENST00000628579 JUPP14923 745 aa10.53□□□□□ -0.72
TMCO1-209ENST00000628579 TSHRP16473 764 aa10.53□□□□□ -0.72
TMCO1-209ENST00000628579 LHCGRP22888 699 aa10.53□□□□□ -0.72
TMCO1-209ENST00000628579 KDELR1P24390 212 aa10.53□□□□□ -0.72
TMCO1-209ENST00000628579 POLR2LP62875 67 aaKnown RBP10.53□□□□□ -0.72
TMCO1-209ENST00000628579 INSM1Q01101 510 aaPredicted RBP10.53□□□□□ -0.72
TMCO1-209ENST00000628579 PPARDQ03181 441 aa10.53□□□□□ -0.72
TMCO1-209ENST00000628579 CYP4F3Q08477 520 aa10.53□□□□□ -0.72
TMCO1-209ENST00000628579 TARDBPQ13148 414 aaKnown RBP eCLIP10.53□□□□□ -0.72
TMCO1-209ENST00000628579 ILKQ13418 452 aa10.53□□□□□ -0.72
TMCO1-209ENST00000628579 NFATC4Q14934 902 aa10.53□□□□□ -0.72
TMCO1-209ENST00000628579 AGERQ15109 404 aa10.53□□□□□ -0.72
TMCO1-209ENST00000628579 CDKN3Q16667 212 aa10.53□□□□□ -0.72
TMCO1-209ENST00000628579 ALG11Q2TAA5 492 aa10.53□□□□□ -0.72
TMCO1-209ENST00000628579 ZFYVE27Q5T4F4 411 aa10.53□□□□□ -0.72
TMCO1-209ENST00000628579 FAXCQ5TGI0 409 aa10.53□□□□□ -0.72
TMCO1-209ENST00000628579 BBS5Q8N3I7 341 aa10.53□□□□□ -0.72
TMCO1-209ENST00000628579 TEX26Q8N6G2 289 aa10.53□□□□□ -0.72
TMCO1-209ENST00000628579 TC2NQ8N9U0 490 aa10.53□□□□□ -0.72
TMCO1-209ENST00000628579 NSMCE1Q8WV22 266 aa10.53□□□□□ -0.72
TMCO1-209ENST00000628579 RFFLQ8WZ73 363 aa10.53□□□□□ -0.72
TMCO1-209ENST00000628579 SPOCK2Q92563 424 aa10.53□□□□□ -0.72
TMCO1-209ENST00000628579 TSACCQ96A04 125 aaPredicted RBP10.53□□□□□ -0.72
TMCO1-209ENST00000628579 PDXPQ96GD0 296 aa10.53□□□□□ -0.72
TMCO1-209ENST00000628579 SMIM14Q96QK8 99 aa10.53□□□□□ -0.72
TMCO1-209ENST00000628579 SEMA3CQ99985 751 aa10.53□□□□□ -0.72
TMCO1-209ENST00000628579 APOOQ9BUR5 198 aa10.53□□□□□ -0.72
TMCO1-209ENST00000628579 SLC13A1Q9BZW2 595 aa10.53□□□□□ -0.72
TMCO1-209ENST00000628579 CLPBQ9H078 707 aa10.53□□□□□ -0.72
TMCO1-209ENST00000628579 RALYQ9UKM9 306 aaKnown RBP10.53□□□□□ -0.72
TMCO1-209ENST00000628579 TFR2Q9UP52 801 aa10.53□□□□□ -0.72
TMCO1-209ENST00000628579 HYOU1Q9Y4L1 999 aa10.53□□□□□ -0.72
TMCO1-209ENST00000628579 CSNK1G3Q9Y6M4 447 aa10.53□□□□□ -0.72
TMCO1-209ENST00000628579 ANKRD11Q6UB99 2663 aaPredicted RBP10.53□□□□□ -0.72
TMCO1-209ENST00000628579 KNTC1P50748 2209 aa10.53□□□□□ -0.72
TMCO1-209ENST00000628579 APC2O95996 2303 aa10.52□□□□□ -0.72
TMCO1-209ENST00000628579 CHD6Q8TD26 2715 aa10.52□□□□□ -0.72
TMCO1-209ENST00000628579 CFAP69A5D8W1 941 aa10.52□□□□□ -0.73
TMCO1-209ENST00000628579 TOR1BO14657 336 aa10.52□□□□□ -0.73
TMCO1-209ENST00000628579 CASC3O15234 703 aaKnown RBP10.52□□□□□ -0.73
TMCO1-209ENST00000628579 MTA2O94776 668 aa10.52□□□□□ -0.73
TMCO1-209ENST00000628579 PGLSO95336 258 aa10.52□□□□□ -0.73
TMCO1-209ENST00000628579 ALPIP09923 528 aa10.52□□□□□ -0.73
TMCO1-209ENST00000628579 CDK4P11802 303 aa10.52□□□□□ -0.73
TMCO1-209ENST00000628579 CTPS1P17812 591 aa10.52□□□□□ -0.73
TMCO1-209ENST00000628579 HNF1BP35680 557 aa10.52□□□□□ -0.73
TMCO1-209ENST00000628579 PEX5P50542 639 aa10.52□□□□□ -0.73
TMCO1-209ENST00000628579 HK3P52790 923 aa10.52□□□□□ -0.73
TMCO1-209ENST00000628579 DSC2Q02487 901 aa10.52□□□□□ -0.73
TMCO1-209ENST00000628579 ITKQ08881 620 aa10.52□□□□□ -0.73
TMCO1-209ENST00000628579 MTM1Q13496 603 aa10.52□□□□□ -0.73
TMCO1-209ENST00000628579 ACOX1Q15067 660 aa10.52□□□□□ -0.73
TMCO1-209ENST00000628579 CNGA3Q16281 694 aa10.52□□□□□ -0.73
TMCO1-209ENST00000628579 IFI16Q16666 785 aaKnown RBP10.52□□□□□ -0.73
TMCO1-209ENST00000628579 DENND2CQ68D51 928 aa10.52□□□□□ -0.73
TMCO1-209ENST00000628579 ZCCHC8Q6NZY4 707 aaKnown RBP10.52□□□□□ -0.73
TMCO1-209ENST00000628579 GUSBP11Q6P575 273 aa10.52□□□□□ -0.73
TMCO1-209ENST00000628579 ENPP7Q6UWV6 458 aa10.52□□□□□ -0.73
TMCO1-209ENST00000628579 RD3Q7Z3Z2 195 aa10.52□□□□□ -0.73
TMCO1-209ENST00000628579 HSD11B1LQ7Z5J1 315 aa10.52□□□□□ -0.73
TMCO1-209ENST00000628579 TSPAN33Q86UF1 283 aa10.52□□□□□ -0.73
TMCO1-209ENST00000628579 LRRC49Q8IUZ0 686 aa10.52□□□□□ -0.73
TMCO1-209ENST00000628579 HID1Q8IV36 788 aa10.52□□□□□ -0.73
TMCO1-209ENST00000628579 MAP7D3Q8IWC1 876 aa10.52□□□□□ -0.73
TMCO1-209ENST00000628579 RHOT2Q8IXI1 618 aa10.52□□□□□ -0.73
TMCO1-209ENST00000628579 PLD5Q8N7P1 536 aa10.52□□□□□ -0.73
TMCO1-209ENST00000628579 PDCD7Q8N8D1 485 aaKnown RBP10.52□□□□□ -0.73
TMCO1-209ENST00000628579 FAM181AQ8N9Y4 354 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms