RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 DCAF4L2Q8NA75 395 aa22.15■■□□□ 1.14
PNKP-220ENST00000627232 KLHL23Q8NBE8 558 aa22.15■■□□□ 1.14
PNKP-220ENST00000627232 FAM45AQ8TCE6 357 aa22.15■■□□□ 1.14
PNKP-220ENST00000627232 ALG14Q96F25 216 aa22.15■■□□□ 1.14
PNKP-220ENST00000627232 OLFM1Q99784 485 aa22.15■■□□□ 1.14
PNKP-220ENST00000627232 DRC3Q9H069 523 aa22.15■■□□□ 1.14
PNKP-220ENST00000627232 TLE6Q9H808 572 aa22.15■■□□□ 1.14
PNKP-220ENST00000627232 IGSF5Q9NSI5 407 aa22.15■■□□□ 1.14
PNKP-220ENST00000627232 PNPOQ9NVS9 261 aa22.15■■□□□ 1.14
PNKP-220ENST00000627232 MARCH4Q9P2E8 410 aaPredicted RBP22.15■■□□□ 1.14
PNKP-220ENST00000627232 DNMT3BQ9UBC3 853 aaKnown RBP22.15■■□□□ 1.14
PNKP-220ENST00000627232 XPR1Q9UBH6 696 aa22.15■■□□□ 1.14
PNKP-220ENST00000627232 LHX3Q9UBR4 397 aa22.15■■□□□ 1.14
PNKP-220ENST00000627232 VWA7Q9Y334 891 aa22.15■■□□□ 1.14
PNKP-220ENST00000627232 MTCL1Q9Y4B5 1905 aaKnown RBP22.14■■□□□ 1.14
PNKP-220ENST00000627232 TRAV19A0A0A6YYK7 116 aa22.14■■□□□ 1.13
PNKP-220ENST00000627232 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.14■■□□□ 1.13
PNKP-220ENST00000627232 CCDC162PA2VCL2 907 aa22.14■■□□□ 1.13
PNKP-220ENST00000627232 SNAP91O60641 907 aa22.14■■□□□ 1.13
PNKP-220ENST00000627232 C8AP07357 584 aa22.14■■□□□ 1.13
PNKP-220ENST00000627232 MZF1P28698 734 aaPredicted RBP22.14■■□□□ 1.13
PNKP-220ENST00000627232 ZNF140P52738 457 aaPredicted RBP22.14■■□□□ 1.13
PNKP-220ENST00000627232 ZXDBP98169 803 aa22.14■■□□□ 1.13
PNKP-220ENST00000627232 CYP4F8P98187 520 aa22.14■■□□□ 1.13
PNKP-220ENST00000627232 FAM83EQ2M2I3 478 aa22.14■■□□□ 1.13
PNKP-220ENST00000627232 FSCBQ5H9T9 825 aa22.14■■□□□ 1.13
PNKP-220ENST00000627232 AGAP9Q5VTM2 703 aa22.14■■□□□ 1.13
PNKP-220ENST00000627232 NCEH1Q6PIU2 408 aa22.14■■□□□ 1.13
PNKP-220ENST00000627232 HS6ST3Q8IZP7 471 aa22.14■■□□□ 1.13
PNKP-220ENST00000627232 KREMEN2Q8NCW0 462 aa22.14■■□□□ 1.13
PNKP-220ENST00000627232 HEXDCQ8WVB3 486 aa22.14■■□□□ 1.13
PNKP-220ENST00000627232 RMDN1Q96DB5 314 aa22.14■■□□□ 1.13
PNKP-220ENST00000627232 PRR11Q96HE9 360 aaPredicted RBP22.14■■□□□ 1.13
PNKP-220ENST00000627232 RILPQ96NA2 401 aa22.14■■□□□ 1.13
PNKP-220ENST00000627232 ADGRE3Q9BY15 652 aa22.14■■□□□ 1.13
PNKP-220ENST00000627232 CDH19Q9H159 772 aa22.14■■□□□ 1.13
PNKP-220ENST00000627232 CATSPERZQ9NTU4 200 aa22.14■■□□□ 1.13
PNKP-220ENST00000627232 VPS28Q9UK41 221 aa22.14■■□□□ 1.13
PNKP-220ENST00000627232 RAI2Q9Y5P3 530 aa22.14■■□□□ 1.13
PNKP-220ENST00000627232 IRAK3Q9Y616 596 aa22.14■■□□□ 1.13
PNKP-220ENST00000627232 CAPN14A8MX76 684 aa22.13■■□□□ 1.13
PNKP-220ENST00000627232 ZNF195O14628 629 aa22.13■■□□□ 1.13
PNKP-220ENST00000627232 SNUPNO95149 360 aaKnown RBP22.13■■□□□ 1.13
PNKP-220ENST00000627232 WISP3O95389 354 aaPredicted RBP22.13■■□□□ 1.13
PNKP-220ENST00000627232 LTA4HP09960 611 aaKnown RBP22.13■■□□□ 1.13
PNKP-220ENST00000627232 GLRBP48167 497 aa22.13■■□□□ 1.13
PNKP-220ENST00000627232 TUBB3Q13509 450 aa22.13■■□□□ 1.13
PNKP-220ENST00000627232 CDH18Q13634 790 aa22.13■■□□□ 1.13
PNKP-220ENST00000627232 SNCBQ16143 134 aa22.13■■□□□ 1.13
PNKP-220ENST00000627232 MPP7Q5T2T1 576 aa22.13■■□□□ 1.13
PNKP-220ENST00000627232 TMC7Q7Z402 723 aa22.13■■□□□ 1.13
PNKP-220ENST00000627232 SDCCAG8Q86SQ7 713 aaPredicted RBP22.13■■□□□ 1.13
PNKP-220ENST00000627232 TTC7BQ86TV6 843 aa22.13■■□□□ 1.13
PNKP-220ENST00000627232 MAB21L3Q8N8X9 362 aa22.13■■□□□ 1.13
PNKP-220ENST00000627232 OR13C4Q8NGS5 318 aa22.13■■□□□ 1.13
PNKP-220ENST00000627232 OR4L1Q8NH43 312 aa22.13■■□□□ 1.13
PNKP-220ENST00000627232 PDCD6IPQ8WUM4 868 aaKnown RBP22.13■■□□□ 1.13
PNKP-220ENST00000627232 CDKN2AIPNLQ96HQ2 116 aa22.13■■□□□ 1.13
PNKP-220ENST00000627232 EXOC2Q96KP1 924 aa22.13■■□□□ 1.13
PNKP-220ENST00000627232 GCNAQ96QF7 691 aa22.13■■□□□ 1.13
PNKP-220ENST00000627232 NDNQ99608 321 aa22.13■■□□□ 1.13
PNKP-220ENST00000627232 EBF4Q9BQW3 602 aa22.13■■□□□ 1.13
PNKP-220ENST00000627232 EMILIN2Q9BXX0 1053 aa22.13■■□□□ 1.13
PNKP-220ENST00000627232 APOBEC2Q9Y235 224 aaKnown RBP22.13■■□□□ 1.13
PNKP-220ENST00000627232 LZTS1Q9Y250 596 aa22.13■■□□□ 1.13
PNKP-220ENST00000627232 SH3BP1Q9Y3L3 701 aa22.13■■□□□ 1.13
PNKP-220ENST00000627232 SPO11Q9Y5K1 396 aa22.13■■□□□ 1.13
PNKP-220ENST00000627232 OR51F1A6NGY5 319 aa22.12■■□□□ 1.13
PNKP-220ENST00000627232 C2orf81A6NN90 581 aa22.12■■□□□ 1.13
PNKP-220ENST00000627232 CCL22O00626 93 aa22.12■■□□□ 1.13
PNKP-220ENST00000627232 DLX3O60479 287 aa22.12■■□□□ 1.13
PNKP-220ENST00000627232 CKMP06732 381 aa22.12■■□□□ 1.13
PNKP-220ENST00000627232 RBP1P09455 135 aa22.12■■□□□ 1.13
PNKP-220ENST00000627232 CSKP41240 450 aa22.12■■□□□ 1.13
PNKP-220ENST00000627232 PGGT1BP53609 377 aa22.12■■□□□ 1.13
PNKP-220ENST00000627232 DNAJB13P59910 316 aa22.12■■□□□ 1.13
PNKP-220ENST00000627232 RCN2Q14257 317 aa22.12■■□□□ 1.13
PNKP-220ENST00000627232 TYSND1Q2T9J0 566 aa22.12■■□□□ 1.13
PNKP-220ENST00000627232 MPPE1Q53F39 396 aa22.12■■□□□ 1.13
PNKP-220ENST00000627232 KLC3Q6P597 504 aa22.12■■□□□ 1.13
PNKP-220ENST00000627232 UBXN10Q96LJ8 280 aa22.12■■□□□ 1.13
PNKP-220ENST00000627232 ZBED2Q9BTP6 218 aa22.12■■□□□ 1.13
PNKP-220ENST00000627232 TMEM106CQ9BVX2 250 aa22.12■■□□□ 1.13
PNKP-220ENST00000627232 ILKAPQ9H0C8 392 aaPredicted RBP22.12■■□□□ 1.13
PNKP-220ENST00000627232 SUDS3Q9H7L9 328 aaPredicted RBP22.12■■□□□ 1.13
PNKP-220ENST00000627232 INTS10Q9NVR2 710 aaKnown RBP22.12■■□□□ 1.13
PNKP-220ENST00000627232 VPS51Q9UID3 782 aa22.12■■□□□ 1.13
PNKP-220ENST00000627232 RAP2CQ9Y3L5 183 aa22.12■■□□□ 1.13
PNKP-220ENST00000627232 ATP6V1G2O95670 118 aa22.11■■□□□ 1.13
PNKP-220ENST00000627232 PIRTP0C851 137 aa22.11■■□□□ 1.13
PNKP-220ENST00000627232 ESRRAP11474 423 aaPredicted RBP22.11■■□□□ 1.13
PNKP-220ENST00000627232 FDXRP22570 491 aa22.11■■□□□ 1.13
PNKP-220ENST00000627232 GRIA4P48058 902 aa22.11■■□□□ 1.13
PNKP-220ENST00000627232 IDH3AP50213 366 aa22.11■■□□□ 1.13
PNKP-220ENST00000627232 TECRLQ5HYJ1 363 aa22.11■■□□□ 1.13
PNKP-220ENST00000627232 AFTPHQ6ULP2 937 aa22.11■■□□□ 1.13
PNKP-220ENST00000627232 RTL10Q7L3V2 364 aa22.11■■□□□ 1.13
PNKP-220ENST00000627232 MAVSQ7Z434 540 aa22.11■■□□□ 1.13
PNKP-220ENST00000627232 GLT6D1Q7Z4J2 308 aa22.11■■□□□ 1.13
PNKP-220ENST00000627232 MFN1Q8IWA4 741 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms