RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 DGKKQ5KSL6 1271 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 ESRP1Q6NXG1 681 aaKnown RBP7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 PACS1Q6VY07 963 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 TIFABQ6ZNK6 161 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 KIAA0408Q6ZU52 694 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 NUDT18Q6ZVK8 323 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 GLT6D1Q7Z4J2 308 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 STRA8Q7Z7C7 330 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 CNTN4Q8IWV2 1026 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 UNC5BQ8IZJ1 945 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 PAF1Q8N7H5 531 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 BLOC1S5Q8TDH9 187 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 PDCD6IPQ8WUM4 868 aaKnown RBP7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 SUSD6Q92537 303 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 ZFYVE19Q96K21 471 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 NSMCE3Q96MG7 304 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 ZNF778Q96MU6 729 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 ZNF641Q96N77 438 aaPredicted RBP7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 C19orf43Q9BQ61 176 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 KXD1Q9BQD3 176 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 TRMT61BQ9BVS5 477 aaKnown RBP7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 CAPS2Q9BXY5 557 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 TNKS2Q9H2K2 1166 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 POMKQ9H5K3 350 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 KCNK9Q9NPC2 374 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 HPS4Q9NQG7 708 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 IARS2Q9NSE4 1012 aaKnown RBP7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 ELOVL2Q9NXB9 296 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 PSD3Q9NYI0 1048 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 NKIRAS1Q9NYS0 192 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 EVLQ9UI08 416 aaPredicted RBP7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 PLA2G4CQ9UP65 541 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 PCDHB9Q9Y5E1 797 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 UNC80Q8N2C7 3258 aa7.58□□□□□ -1.2
PTP4A1-206ENST00000627002 NOTCH4Q99466 2003 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 ATG2AQ2TAZ0 1938 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 CCDC78A2IDD5 438 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 FAM47DPA6NHR8 397 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 UGT1A9O60656 530 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 RPP40O75818 363 aaKnown RBP7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 PIGNO95427 931 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 PDHA1P08559 390 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 KRT4P19013 534 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 LPOP22079 712 aaPredicted RBP7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 PSMA3P25788 255 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 NFKBIAP25963 317 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 GDI1P31150 447 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 MDH1P40925 334 aaKnown RBP7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 POLD2P49005 469 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 CCNHP51946 323 aaPredicted RBP7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 ZNF140P52738 457 aaPredicted RBP7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 LIMK2P53671 638 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 GRM2Q14416 872 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 AAK1Q2M2I8 961 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 GAB4Q2WGN9 574 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 ITPRIPL2Q3MIP1 535 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 TMEM215Q68D42 235 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 NEPROQ6NW34 567 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 PARM1Q6UWI2 310 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 GDPD4Q6W3E5 623 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 GALNT7Q86SF2 657 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 C12orf40Q86WS4 652 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 CAMK1DQ8IU85 385 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 SUGP1Q8IWZ8 645 aaKnown RBP7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 MICALL1Q8N3F8 863 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 TERB1Q8NA31 727 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 OR13J1Q8NGT2 312 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 OR6K2Q8NGY2 324 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 ACMSDQ8TDX5 336 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 FRS2Q8WU20 508 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 MZB1Q8WU39 189 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 UCMAQ8WVF2 138 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 PIH1D2Q8WWB5 315 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 SCG3Q8WXD2 468 aaKnown RBP7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 PTPRN2Q92932 1015 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 CENPTQ96BT3 561 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 SGSM3Q96HU1 749 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 LRIG1Q96JA1 1093 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 MRGPRX3Q96LB0 322 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 RBBP8Q99708 897 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 HEPHQ9BQS7 1158 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 OSBPL1AQ9BXW6 950 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 PLA2G2FQ9BZM2 168 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 MFSD1Q9H3U5 465 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 SUV39H2Q9H5I1 410 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 UGT1A7Q9HAW7 530 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 UGT1A10Q9HAW8 530 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 UGT1A8Q9HAW9 530 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 MAGEE1Q9HCI5 957 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 NLE1Q9NVX2 485 aaPredicted RBP7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 SLC2A6Q9UGQ3 507 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 SLCO3A1Q9UIG8 710 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 PHTF1Q9UMS5 762 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 HCN4Q9Y3Q4 1203 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 USP15Q9Y4E8 981 aaPredicted RBP7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 ARL5AQ9Y689 179 aa7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 LAMA2P24043 3122 aaKnown RBP7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 NUP210Q8TEM1 1887 aaPredicted RBP7.57□□□□□ -1.2
PTP4A1-206ENST00000627002 EDDM13A0A1B0GTR0 161 aa7.56□□□□□ -1.2
PTP4A1-206ENST00000627002 A0A1W2PPM1 405 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms