RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 MS4A14Q96JA4 679 aa11.13□□□□□ -0.63
VPS8-227ENST00000625842 SLC2A11Q9BYW1 496 aa11.13□□□□□ -0.63
VPS8-227ENST00000625842 MCOLN1Q9GZU1 580 aa11.13□□□□□ -0.63
VPS8-227ENST00000625842 KLHL25Q9H0H3 589 aa11.13□□□□□ -0.63
VPS8-227ENST00000625842 LRMDAQ9H2I8 198 aa11.13□□□□□ -0.63
VPS8-227ENST00000625842 ELAC1Q9H777 363 aaKnown RBP11.13□□□□□ -0.63
VPS8-227ENST00000625842 PCDH18Q9HCL0 1135 aa11.13□□□□□ -0.63
VPS8-227ENST00000625842 WHRNQ9P202 907 aa11.13□□□□□ -0.63
VPS8-227ENST00000625842 COL1A1P02452 1464 aaPredicted RBP11.13□□□□□ -0.63
VPS8-227ENST00000625842 PRMT5O14744 637 aaPredicted RBP11.13□□□□□ -0.63
VPS8-227ENST00000625842 PKMP14618 531 aaKnown RBP11.13□□□□□ -0.63
VPS8-227ENST00000625842 SLC5A3P53794 718 aa11.13□□□□□ -0.63
VPS8-227ENST00000625842 CASP8Q14790 479 aa11.13□□□□□ -0.63
VPS8-227ENST00000625842 MFSD5Q6N075 450 aa11.13□□□□□ -0.63
VPS8-227ENST00000625842 SLC39A5Q6ZMH5 540 aa11.13□□□□□ -0.63
VPS8-227ENST00000625842 CCDC33Q8N5R6 958 aa11.13□□□□□ -0.63
VPS8-227ENST00000625842 FNDC5Q8NAU1 212 aa11.13□□□□□ -0.63
VPS8-227ENST00000625842 TATDN2Q93075 761 aa11.13□□□□□ -0.63
VPS8-227ENST00000625842 ZNF670Q9BS34 389 aa11.13□□□□□ -0.63
VPS8-227ENST00000625842 KLHL4Q9C0H6 718 aa11.13□□□□□ -0.63
VPS8-227ENST00000625842 PLK2Q9NYY3 685 aa11.13□□□□□ -0.63
VPS8-227ENST00000625842 SLC24A2Q9UI40 661 aa11.13□□□□□ -0.63
VPS8-227ENST00000625842 N6AMT1Q9Y5N5 214 aa11.13□□□□□ -0.63
VPS8-227ENST00000625842 PREX1Q8TCU6 1659 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 A0A0A0MRY4 1105 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 DGKIO75912 1065 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 ZNF682O95780 498 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 IFNGP01579 166 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 ITGA2P17301 1181 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 POU1F1P28069 291 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 CLK1P49759 484 aaKnown RBP11.12□□□□□ -0.63
VPS8-227ENST00000625842 ZSCAN26Q16670 478 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 TMEM119Q4V9L6 283 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 DUPD1Q68J44 220 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 TRPM8Q7Z2W7 1104 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 RAB43Q86YS6 212 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 NXPE3Q969Y0 559 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 SPATA13Q96N96 652 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 CDADC1Q9BWV3 514 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 SLC29A3Q9BZD2 475 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 CARS2Q9HA77 564 aaKnown RBP11.12□□□□□ -0.63
VPS8-227ENST00000625842 SLC12A4Q9UP95 1085 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 DUSP10Q9Y6W6 482 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 ASTN2O75129 1339 aaPredicted RBP11.12□□□□□ -0.63
VPS8-227ENST00000625842 A0A1W2PRU2 124 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 ULK1O75385 1050 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 IPO13O94829 963 aaKnown RBP11.12□□□□□ -0.63
VPS8-227ENST00000625842 MAT2AP31153 395 aaKnown RBP11.12□□□□□ -0.63
VPS8-227ENST00000625842 DNAJC3Q13217 504 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 PLEKHG6Q3KR16 790 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 TCEAL6Q6IPX3 200 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 RFX8Q6ZV50 586 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 SMYD1Q8NB12 490 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 ST13P5Q8NFI4 369 aaPredicted RBP11.12□□□□□ -0.63
VPS8-227ENST00000625842 CYP2W1Q8TAV3 490 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 CALML5Q9NZT1 146 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 CFAP73A6NFT4 308 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 KCNK1O00180 336 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 B3GALT2O43825 422 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 CER1O95813 267 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 TIMP1P01033 207 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 FESP07332 822 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 PGM1P36871 562 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 BMPR1AP36894 532 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 MAGEA10P43363 369 aaPredicted RBP11.12□□□□□ -0.63
VPS8-227ENST00000625842 CXCL12P48061 93 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 ECT2LQ008S8 904 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 GNA12Q03113 381 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 EIF4HQ15056 248 aaKnown RBP11.12□□□□□ -0.63
VPS8-227ENST00000625842 GPAT3Q53EU6 434 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 CARD16Q5EG05 197 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 SDHAF4Q5VUM1 108 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 BRAT1Q6PJG6 821 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 AMZ2Q86W34 360 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 TMEM161BQ8NDZ6 487 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 ADCY4Q8NFM4 1077 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 PNPLA2Q96AD5 504 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 RAB7BQ96AH8 199 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 EME1Q96AY2 570 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 FAM136AQ96C01 138 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 PPP1R36Q96LQ0 422 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 OLFM1Q99784 485 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 ABCB6Q9NP58 842 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 GLS2Q9UI32 602 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 ITSN1Q15811 1721 aa11.12□□□□□ -0.63
VPS8-227ENST00000625842 YDJCA8MPS7 323 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 B4DGG1 531 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 ONECUT3O60422 494 aaPredicted RBP11.11□□□□□ -0.63
VPS8-227ENST00000625842 AKAP3O75969 853 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 MIPP30301 263 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 HCAR3P49019 387 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 DEFA1P59665 94 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 DEFA3P59666 94 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 HNRNPKP61978 463 aaKnown RBP eCLIP11.11□□□□□ -0.63
VPS8-227ENST00000625842 PCDH20Q8N6Y1 951 aaKnown RBP11.11□□□□□ -0.63
VPS8-227ENST00000625842 FBXO36Q8NEA4 188 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 MSANTD3Q96H12 275 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 SCML1Q9UN30 329 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 PLAGL2Q9UPG8 496 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 ACOT7O00154 380 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms