RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 BMP6P22004 513 aa13.97□□□□□ -0.17
SNX1-214ENST00000625244 GPR3P46089 330 aa13.97□□□□□ -0.17
SNX1-214ENST00000625244 MC2RQ01718 297 aa13.97□□□□□ -0.17
SNX1-214ENST00000625244 SQSTM1Q13501 440 aa13.97□□□□□ -0.17
SNX1-214ENST00000625244 MYLK3Q32MK0 819 aa13.97□□□□□ -0.17
SNX1-214ENST00000625244 ATL3Q6DD88 541 aa13.97□□□□□ -0.17
SNX1-214ENST00000625244 CEACAM20Q6UY09 585 aa13.97□□□□□ -0.17
SNX1-214ENST00000625244 TTC13Q8NBP0 860 aa13.97□□□□□ -0.17
SNX1-214ENST00000625244 PLA2G15Q8NCC3 412 aa13.97□□□□□ -0.17
SNX1-214ENST00000625244 STK32AQ8WU08 396 aa13.97□□□□□ -0.17
SNX1-214ENST00000625244 PATE1Q8WXA2 126 aa13.97□□□□□ -0.17
SNX1-214ENST00000625244 ISG20Q96AZ6 181 aaKnown RBP13.97□□□□□ -0.17
SNX1-214ENST00000625244 RNF31Q96EP0 1072 aa13.97□□□□□ -0.17
SNX1-214ENST00000625244 C5orf34Q96MH7 638 aa13.97□□□□□ -0.17
SNX1-214ENST00000625244 LUZP4Q9P127 313 aa13.97□□□□□ -0.17
SNX1-214ENST00000625244 ZNF212Q9UDV6 495 aa13.97□□□□□ -0.17
SNX1-214ENST00000625244 CFAP45Q9UL16 551 aa13.97□□□□□ -0.17
SNX1-214ENST00000625244 SLC5A6Q9Y289 635 aa13.97□□□□□ -0.17
SNX1-214ENST00000625244 CDC14CA4D256 554 aa13.96□□□□□ -0.17
SNX1-214ENST00000625244 ZW10O43264 779 aa13.96□□□□□ -0.17
SNX1-214ENST00000625244 DLSTP36957 453 aa13.96□□□□□ -0.17
SNX1-214ENST00000625244 MTA1Q13330 715 aa13.96□□□□□ -0.17
SNX1-214ENST00000625244 TMEM52BQ4KMG9 183 aa13.96□□□□□ -0.17
SNX1-214ENST00000625244 ZCWPW2Q504Y3 356 aa13.96□□□□□ -0.17
SNX1-214ENST00000625244 DCAF17Q5H9S7 520 aaPredicted RBP13.96□□□□□ -0.17
SNX1-214ENST00000625244 ATXN7L2Q5T6C5 722 aaPredicted RBP13.96□□□□□ -0.17
SNX1-214ENST00000625244 TCERG1LQ5VWI1 586 aa13.96□□□□□ -0.17
SNX1-214ENST00000625244 ANKRD40Q6AI12 368 aa13.96□□□□□ -0.17
SNX1-214ENST00000625244 TMEM71Q6P5X7 295 aa13.96□□□□□ -0.17
SNX1-214ENST00000625244 GDPD4Q6W3E5 623 aa13.96□□□□□ -0.17
SNX1-214ENST00000625244 NRROSQ86YC3 692 aa13.96□□□□□ -0.17
SNX1-214ENST00000625244 APLFQ8IW19 511 aaPredicted RBP13.96□□□□□ -0.17
SNX1-214ENST00000625244 CEP57L1Q8IYX8 460 aa13.96□□□□□ -0.17
SNX1-214ENST00000625244 Q8NA96 180 aa13.96□□□□□ -0.17
SNX1-214ENST00000625244 POM121Q96HA1 1249 aa13.96□□□□□ -0.17
SNX1-214ENST00000625244 ZPBPQ9BS86 351 aa13.96□□□□□ -0.17
SNX1-214ENST00000625244 OSBPL1AQ9BXW6 950 aa13.96□□□□□ -0.17
SNX1-214ENST00000625244 SLC29A3Q9BZD2 475 aa13.96□□□□□ -0.17
SNX1-214ENST00000625244 PDP2Q9P2J9 529 aa13.96□□□□□ -0.17
SNX1-214ENST00000625244 CROTQ9UKG9 612 aa13.96□□□□□ -0.17
SNX1-214ENST00000625244 ABCA2Q9BZC7 2435 aa13.95□□□□□ -0.18
SNX1-214ENST00000625244 A8MU76 341 aa13.95□□□□□ -0.18
SNX1-214ENST00000625244 PPM1DO15297 605 aa13.95□□□□□ -0.18
SNX1-214ENST00000625244 ACTN4O43707 911 aaKnown RBP13.95□□□□□ -0.18
SNX1-214ENST00000625244 POP4O95707 220 aaKnown RBP13.95□□□□□ -0.18
SNX1-214ENST00000625244 ACVRL1P37023 503 aa13.95□□□□□ -0.18
SNX1-214ENST00000625244 PGDP52209 483 aa13.95□□□□□ -0.18
SNX1-214ENST00000625244 KIAA1024LP59773 190 aa13.95□□□□□ -0.18
SNX1-214ENST00000625244 MTM1Q13496 603 aa13.95□□□□□ -0.18
SNX1-214ENST00000625244 PKP1Q13835 747 aa13.95□□□□□ -0.18
SNX1-214ENST00000625244 NR6A1Q15406 480 aa13.95□□□□□ -0.18
SNX1-214ENST00000625244 FOXD4L6Q3SYB3 417 aaPredicted RBP13.95□□□□□ -0.18
SNX1-214ENST00000625244 SNAP47Q5SQN1 464 aa13.95□□□□□ -0.18
SNX1-214ENST00000625244 OTUD1Q5VV17 481 aaPredicted RBP13.95□□□□□ -0.18
SNX1-214ENST00000625244 FOXD4L3Q6VB84 417 aaPredicted RBP13.95□□□□□ -0.18
SNX1-214ENST00000625244 ZNF783Q6ZMS7 281 aa13.95□□□□□ -0.18
SNX1-214ENST00000625244 ESX1Q8N693 406 aa13.95□□□□□ -0.18
SNX1-214ENST00000625244 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.95□□□□□ -0.18
SNX1-214ENST00000625244 OR2AP1Q8NGE2 309 aa13.95□□□□□ -0.18
SNX1-214ENST00000625244 TKTL2Q9H0I9 626 aa13.95□□□□□ -0.18
SNX1-214ENST00000625244 FBXO8Q9NRD0 319 aa13.95□□□□□ -0.18
SNX1-214ENST00000625244 PIGVQ9NUD9 493 aa13.95□□□□□ -0.18
SNX1-214ENST00000625244 ARHGEF38Q9NXL2 777 aa13.95□□□□□ -0.18
SNX1-214ENST00000625244 MAP10Q9P2G4 905 aa13.95□□□□□ -0.18
SNX1-214ENST00000625244 RCOR3Q9P2K3 495 aaPredicted RBP13.95□□□□□ -0.18
SNX1-214ENST00000625244 DIDO1Q9BTC0 2240 aaKnown RBP13.94□□□□□ -0.18
SNX1-214ENST00000625244 IGLV3-10A0A075B6K4 115 aa13.94□□□□□ -0.18
SNX1-214ENST00000625244 CACNB4O00305 520 aaPredicted RBP13.94□□□□□ -0.18
SNX1-214ENST00000625244 KATNA1O75449 491 aa13.94□□□□□ -0.18
SNX1-214ENST00000625244 GSRP00390 522 aa13.94□□□□□ -0.18
SNX1-214ENST00000625244 EPB41P11171 864 aaKnown RBP13.94□□□□□ -0.18
SNX1-214ENST00000625244 CCNB1P14635 433 aa13.94□□□□□ -0.18
SNX1-214ENST00000625244 SNRPD1P62314 119 aaKnown RBP13.94□□□□□ -0.18
SNX1-214ENST00000625244 GNA12Q03113 381 aa13.94□□□□□ -0.18
SNX1-214ENST00000625244 BIRC2Q13490 618 aa13.94□□□□□ -0.18
SNX1-214ENST00000625244 SEMA5AQ13591 1074 aa13.94□□□□□ -0.18
SNX1-214ENST00000625244 MAP7Q14244 749 aa13.94□□□□□ -0.18
SNX1-214ENST00000625244 LEKR1Q6ZMV7 388 aa13.94□□□□□ -0.18
SNX1-214ENST00000625244 MCEMP1Q8IX19 187 aa13.94□□□□□ -0.18
SNX1-214ENST00000625244 ARHGEF2Q92974 986 aaKnown RBP13.94□□□□□ -0.18
SNX1-214ENST00000625244 C19orf60Q96EN9 201 aa13.94□□□□□ -0.18
SNX1-214ENST00000625244 DPYSL5Q9BPU6 564 aa13.94□□□□□ -0.18
SNX1-214ENST00000625244 LGR4Q9BXB1 951 aa13.94□□□□□ -0.18
SNX1-214ENST00000625244 FAM13BQ9NYF5 915 aa13.94□□□□□ -0.18
SNX1-214ENST00000625244 TAAR2Q9P1P5 351 aa13.94□□□□□ -0.18
SNX1-214ENST00000625244 MOSPD1Q9UJG1 213 aa13.94□□□□□ -0.18
SNX1-214ENST00000625244 ENTPD4Q9Y227 616 aa13.94□□□□□ -0.18
SNX1-214ENST00000625244 POLEQ07864 2286 aa13.94□□□□□ -0.18
SNX1-214ENST00000625244 TNFRSF10CO14798 259 aa13.93□□□□□ -0.18
SNX1-214ENST00000625244 KRT86O43790 486 aa13.93□□□□□ -0.18
SNX1-214ENST00000625244 HSF2BPO75031 334 aa13.93□□□□□ -0.18
SNX1-214ENST00000625244 SRGAP2O75044 1071 aa13.93□□□□□ -0.18
SNX1-214ENST00000625244 CBX6O95503 412 aa13.93□□□□□ -0.18
SNX1-214ENST00000625244 YEATS4O95619 227 aa13.93□□□□□ -0.18
SNX1-214ENST00000625244 GLI1P08151 1106 aa13.93□□□□□ -0.18
SNX1-214ENST00000625244 ZNF28P17035 718 aa13.93□□□□□ -0.18
SNX1-214ENST00000625244 TFE3P19532 575 aaPredicted RBP13.93□□□□□ -0.18
SNX1-214ENST00000625244 AK4P27144 223 aaPredicted RBP13.93□□□□□ -0.18
SNX1-214ENST00000625244 MAN1A1P33908 653 aa13.93□□□□□ -0.18
SNX1-214ENST00000625244 LEPRP48357 1165 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms