RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 MTM1Q13496 603 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 PDE1CQ14123 709 aaPredicted RBP12.51□□□□□ -0.41
LINC00963-217ENST00000624009 SMAD1Q15797 465 aaKnown RBP12.51□□□□□ -0.41
LINC00963-217ENST00000624009 TAZQ16635 292 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 PROX2Q3B8N5 592 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 HS1BP3Q53T59 392 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 PRAMEF14Q5SWL7 426 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 C11orf63Q6NUN7 778 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 LIPIQ6XZB0 460 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 BZW1Q7L1Q6 419 aaKnown RBP12.51□□□□□ -0.41
LINC00963-217ENST00000624009 TMPRSS7Q7RTY8 843 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 GATAD2AQ86YP4 633 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 NDUFAF2Q8N183 169 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 SLC25A45Q8N413 288 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 PGBD5Q8N414 524 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 PLD5Q8N7P1 536 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 GATA6Q92908 595 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 SCRN2Q96FV2 425 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 CNDP2Q96KP4 475 aaKnown RBP12.51□□□□□ -0.41
LINC00963-217ENST00000624009 CNTNAP3BQ96NU0 1288 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 MYOCQ99972 504 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 TMEM121BQ9BXQ6 578 aaPredicted RBP12.51□□□□□ -0.41
LINC00963-217ENST00000624009 CNTNAP3Q9BZ76 1288 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 NOD2Q9HC29 1040 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 EVA1BQ9NVM1 165 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 DTLQ9NZJ0 730 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 IMPACTQ9P2X3 320 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 RPL26L1Q9UNX3 145 aaKnown RBP12.51□□□□□ -0.41
LINC00963-217ENST00000624009 PCDHA13Q9Y5I0 950 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 CFAP47Q6ZTR5 3102 aa12.51□□□□□ -0.41
LINC00963-217ENST00000624009 AHCTF1Q8WYP5 2266 aa12.5□□□□□ -0.41
LINC00963-217ENST00000624009 SPOPO43791 374 aa12.5□□□□□ -0.41
LINC00963-217ENST00000624009 HYAL3O43820 417 aaPredicted RBP12.5□□□□□ -0.41
LINC00963-217ENST00000624009 RFPL3O75679 317 aa12.5□□□□□ -0.41
LINC00963-217ENST00000624009 NDUFA10O95299 355 aa12.5□□□□□ -0.41
LINC00963-217ENST00000624009 PGLSO95336 258 aa12.5□□□□□ -0.41
LINC00963-217ENST00000624009 ELFN1P0C7U0 828 aa12.5□□□□□ -0.41
LINC00963-217ENST00000624009 CYP2A6P11509 494 aaPredicted RBP12.5□□□□□ -0.41
LINC00963-217ENST00000624009 CCNB1P14635 433 aa12.5□□□□□ -0.41
LINC00963-217ENST00000624009 CKMT2P17540 419 aa12.5□□□□□ -0.41
LINC00963-217ENST00000624009 HTR1BP28222 390 aa12.5□□□□□ -0.41
LINC00963-217ENST00000624009 TEAD1P28347 426 aa12.5□□□□□ -0.41
LINC00963-217ENST00000624009 CDC25BP30305 580 aa12.5□□□□□ -0.41
LINC00963-217ENST00000624009 GJC1P36383 396 aa12.5□□□□□ -0.41
LINC00963-217ENST00000624009 TRIM23P36406 574 aa12.5□□□□□ -0.41
LINC00963-217ENST00000624009 IFI35P80217 286 aaPredicted RBP12.5□□□□□ -0.41
LINC00963-217ENST00000624009 PDK1Q15118 436 aa12.5□□□□□ -0.41
LINC00963-217ENST00000624009 SLC14A2Q15849 920 aa12.5□□□□□ -0.41
LINC00963-217ENST00000624009 WSCD2Q2TBF2 565 aa12.5□□□□□ -0.41
LINC00963-217ENST00000624009 ODF2Q5BJF6 829 aa12.5□□□□□ -0.41
LINC00963-217ENST00000624009 LRRC73Q5JTD7 316 aa12.5□□□□□ -0.41
LINC00963-217ENST00000624009 ZFYVE27Q5T4F4 411 aa12.5□□□□□ -0.41
LINC00963-217ENST00000624009 ARMC12Q5T9G4 340 aa12.5□□□□□ -0.41
LINC00963-217ENST00000624009 TMPRSS12Q86WS5 348 aa12.5□□□□□ -0.41
LINC00963-217ENST00000624009 CPNE8Q86YQ8 564 aa12.5□□□□□ -0.41
LINC00963-217ENST00000624009 CCDC13Q8IYE1 715 aa12.5□□□□□ -0.41
LINC00963-217ENST00000624009 CBARPQ8N350 705 aaPredicted RBP12.5□□□□□ -0.41
LINC00963-217ENST00000624009 KDF1Q8NAX2 398 aaPredicted RBP12.5□□□□□ -0.41
LINC00963-217ENST00000624009 TPCN2Q8NHX9 752 aa12.5□□□□□ -0.41
LINC00963-217ENST00000624009 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.5□□□□□ -0.41
LINC00963-217ENST00000624009 OLFM3Q96PB7 478 aa12.5□□□□□ -0.41
LINC00963-217ENST00000624009 WRAP53Q9BUR4 548 aaKnown RBP12.5□□□□□ -0.41
LINC00963-217ENST00000624009 MAK16Q9BXY0 300 aaKnown RBP12.5□□□□□ -0.41
LINC00963-217ENST00000624009 DNAJC28Q9NX36 388 aa12.5□□□□□ -0.41
LINC00963-217ENST00000624009 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.5□□□□□ -0.41
LINC00963-217ENST00000624009 ALG6Q9Y672 507 aa12.5□□□□□ -0.41
LINC00963-217ENST00000624009 EPN1Q9Y6I3 576 aaPredicted RBP12.5□□□□□ -0.41
LINC00963-217ENST00000624009 LAMA5O15230 3695 aa12.49□□□□□ -0.41
LINC00963-217ENST00000624009 APOL1O14791 398 aa12.49□□□□□ -0.41
LINC00963-217ENST00000624009 PPP1R12AO14974 1030 aaPredicted RBP12.49□□□□□ -0.41
LINC00963-217ENST00000624009 LZTS3O60299 673 aaPredicted RBP12.49□□□□□ -0.41
LINC00963-217ENST00000624009 FZD6O60353 706 aa12.49□□□□□ -0.41
LINC00963-217ENST00000624009 CPP00450 1065 aa12.49□□□□□ -0.41
LINC00963-217ENST00000624009 PROS1P07225 676 aa12.49□□□□□ -0.41
LINC00963-217ENST00000624009 GP1BAP07359 652 aa12.49□□□□□ -0.41
LINC00963-217ENST00000624009 CKMT1AP12532 417 aa12.49□□□□□ -0.41
LINC00963-217ENST00000624009 ZNF30P17039 623 aa12.49□□□□□ -0.41
LINC00963-217ENST00000624009 COMTP21964 271 aa12.49□□□□□ -0.41
LINC00963-217ENST00000624009 ACADVLP49748 655 aa12.49□□□□□ -0.41
LINC00963-217ENST00000624009 KIAA1024LP59773 190 aa12.49□□□□□ -0.41
LINC00963-217ENST00000624009 GBE1Q04446 702 aa12.49□□□□□ -0.41
LINC00963-217ENST00000624009 SLC10A2Q12908 348 aaPredicted RBP12.49□□□□□ -0.41
LINC00963-217ENST00000624009 TFDP2Q14188 446 aa12.49□□□□□ -0.41
LINC00963-217ENST00000624009 NFATC4Q14934 902 aa12.49□□□□□ -0.41
LINC00963-217ENST00000624009 IRF4Q15306 451 aa12.49□□□□□ -0.41
LINC00963-217ENST00000624009 ESRP1Q6NXG1 681 aaKnown RBP12.49□□□□□ -0.41
LINC00963-217ENST00000624009 UNQ6494/PRO21346Q6UXR6 183 aa12.49□□□□□ -0.41
LINC00963-217ENST00000624009 CCNI2Q6ZMN8 369 aaPredicted RBP12.49□□□□□ -0.41
LINC00963-217ENST00000624009 USP45Q70EL2 814 aa12.49□□□□□ -0.41
LINC00963-217ENST00000624009 NLRP8Q86W28 1048 aa12.49□□□□□ -0.41
LINC00963-217ENST00000624009 GAS2L3Q86XJ1 694 aa12.49□□□□□ -0.41
LINC00963-217ENST00000624009 KATNAL2Q8IYT4 538 aa12.49□□□□□ -0.41
LINC00963-217ENST00000624009 TXLNBQ8N3L3 684 aa12.49□□□□□ -0.41
LINC00963-217ENST00000624009 CHCHD4Q8N4Q1 142 aa12.49□□□□□ -0.41
LINC00963-217ENST00000624009 EID2Q8N6I1 236 aa12.49□□□□□ -0.41
LINC00963-217ENST00000624009 ZNF548Q8NEK5 533 aaPredicted RBP12.49□□□□□ -0.41
LINC00963-217ENST00000624009 UBE2Q2Q8WVN8 375 aa12.49□□□□□ -0.41
LINC00963-217ENST00000624009 NSMCE3Q96MG7 304 aa12.49□□□□□ -0.41
LINC00963-217ENST00000624009 IL12RB2Q99665 862 aa12.49□□□□□ -0.41
LINC00963-217ENST00000624009 SEMA3CQ99985 751 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms