RNA–Protein interactions for RNA: ENST00000623253.4

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253 ACSL6Q9UKU0 697 aa16.3■□□□□ 0.2
CD99-211ENST00000623253 RNF215Q9Y6U7 377 aa16.3■□□□□ 0.2
CD99-211ENST00000623253 TMEM202A6NGA9 273 aa16.29■□□□□ 0.2
CD99-211ENST00000623253 BUB1BO60566 1050 aaPredicted RBP16.29■□□□□ 0.2
CD99-211ENST00000623253 ITGB2P05107 769 aa16.29■□□□□ 0.2
CD99-211ENST00000623253 ANP32AP39687 249 aaKnown RBP16.29■□□□□ 0.2
CD99-211ENST00000623253 ETV5P41161 510 aa16.29■□□□□ 0.2
CD99-211ENST00000623253 POLR2FP61218 127 aaKnown RBP16.29■□□□□ 0.2
CD99-211ENST00000623253 GRM3Q14832 879 aa16.29■□□□□ 0.2
CD99-211ENST00000623253 CERCAMQ5T4B2 595 aa16.29■□□□□ 0.2
CD99-211ENST00000623253 BRAT1Q6PJG6 821 aa16.29■□□□□ 0.2
CD99-211ENST00000623253 XKR5Q6UX68 686 aa16.29■□□□□ 0.2
CD99-211ENST00000623253 TRIM72Q6ZMU5 477 aa16.29■□□□□ 0.2
CD99-211ENST00000623253 CLEC17AQ6ZS10 378 aa16.29■□□□□ 0.2
CD99-211ENST00000623253 OR56A4Q8NGH8 313 aa16.29■□□□□ 0.2
CD99-211ENST00000623253 ZNF641Q96N77 438 aaPredicted RBP16.29■□□□□ 0.2
CD99-211ENST00000623253 PCDHB18PQ96TA0 734 aa16.29■□□□□ 0.2
CD99-211ENST00000623253 NLRC4Q9NPP4 1024 aa16.29■□□□□ 0.2
CD99-211ENST00000623253 FAM207AQ9NSI2 230 aaPredicted RBP16.29■□□□□ 0.2
CD99-211ENST00000623253 SEPT11Q9NVA2 429 aaKnown RBP16.29■□□□□ 0.2
CD99-211ENST00000623253 FOXJ2Q9P0K8 574 aa16.29■□□□□ 0.2
CD99-211ENST00000623253 APPL1Q9UKG1 709 aa16.29■□□□□ 0.2
CD99-211ENST00000623253 ATP8A1Q9Y2Q0 1164 aa16.29■□□□□ 0.2
CD99-211ENST00000623253 DGKBQ9Y6T7 804 aa16.29■□□□□ 0.2
CD99-211ENST00000623253 TSPAN11A1L157 253 aa16.28■□□□□ 0.2
CD99-211ENST00000623253 J3KR12 359 aa16.28■□□□□ 0.2
CD99-211ENST00000623253 CCP110O43303 1012 aa16.28■□□□□ 0.2
CD99-211ENST00000623253 RECQL5O94762 991 aaPredicted RBP16.28■□□□□ 0.2
CD99-211ENST00000623253 EEF1GP26641 437 aaKnown RBP16.28■□□□□ 0.2
CD99-211ENST00000623253 SOX5P35711 763 aa16.28■□□□□ 0.2
CD99-211ENST00000623253 MMP12P39900 470 aa16.28■□□□□ 0.2
CD99-211ENST00000623253 KLK7P49862 253 aa16.28■□□□□ 0.2
CD99-211ENST00000623253 CYP4F2P78329 520 aa16.28■□□□□ 0.2
CD99-211ENST00000623253 ZFP36L1Q07352 338 aaKnown RBP16.28■□□□□ 0.2
CD99-211ENST00000623253 AMZ1Q400G9 498 aa16.28■□□□□ 0.2
CD99-211ENST00000623253 C14orf28Q4W4Y0 310 aa16.28■□□□□ 0.2
CD99-211ENST00000623253 TCP11X2Q5H9J9 407 aa16.28■□□□□ 0.2
CD99-211ENST00000623253 ATG14Q6ZNE5 492 aa16.28■□□□□ 0.2
CD99-211ENST00000623253 SPRED1Q7Z699 444 aa16.28■□□□□ 0.2
CD99-211ENST00000623253 ZSWIM9Q86XI8 627 aa16.28■□□□□ 0.2
CD99-211ENST00000623253 JPH3Q8WXH2 748 aaPredicted RBP16.28■□□□□ 0.2
CD99-211ENST00000623253 FUBP1Q96AE4 644 aaKnown RBP16.28■□□□□ 0.2
CD99-211ENST00000623253 TMEM159Q96B96 161 aa16.28■□□□□ 0.2
CD99-211ENST00000623253 CELF6Q96J87 481 aaKnown RBP16.28■□□□□ 0.2
CD99-211ENST00000623253 TMEM168Q9H0V1 697 aa16.28■□□□□ 0.2
CD99-211ENST00000623253 VPS16Q9H269 839 aa16.28■□□□□ 0.2
CD99-211ENST00000623253 GANQ9H2C0 597 aa16.28■□□□□ 0.2
CD99-211ENST00000623253 SUDS3Q9H7L9 328 aaPredicted RBP16.28■□□□□ 0.2
CD99-211ENST00000623253 CYP4F12Q9HCS2 524 aa16.28■□□□□ 0.2
CD99-211ENST00000623253 FGF22Q9HCT0 170 aa16.28■□□□□ 0.2
CD99-211ENST00000623253 STARD5Q9NSY2 213 aa16.28■□□□□ 0.2
CD99-211ENST00000623253 PCDHGA4Q9Y5G9 962 aa16.28■□□□□ 0.2
CD99-211ENST00000623253 ANKRD62A6NC57 917 aa16.27■□□□□ 0.2
CD99-211ENST00000623253 A8MX80 341 aa16.27■□□□□ 0.2
CD99-211ENST00000623253 TEX33O43247 280 aa16.27■□□□□ 0.2
CD99-211ENST00000623253 UNGP13051 313 aaPredicted RBP16.27■□□□□ 0.2
CD99-211ENST00000623253 KELP23276 732 aa16.27■□□□□ 0.2
CD99-211ENST00000623253 PTP4A2Q12974 167 aa16.27■□□□□ 0.2
CD99-211ENST00000623253 AGERQ15109 404 aa16.27■□□□□ 0.2
CD99-211ENST00000623253 TBR1Q16650 682 aa16.27■□□□□ 0.2
CD99-211ENST00000623253 MAP9Q49MG5 647 aa16.27■□□□□ 0.2
CD99-211ENST00000623253 TMEM164Q5U3C3 297 aa16.27■□□□□ 0.2
CD99-211ENST00000623253 OGFOD3Q6PK18 319 aa16.27■□□□□ 0.2
CD99-211ENST00000623253 UMODL1-AS1Q8N2C9 162 aa16.27■□□□□ 0.2
CD99-211ENST00000623253 CCL4L1Q8NHW4 92 aa16.27■□□□□ 0.2
CD99-211ENST00000623253 SEMA6CQ9H3T2 930 aa16.27■□□□□ 0.2
CD99-211ENST00000623253 ATP13A3Q9H7F0 1226 aa16.27■□□□□ 0.2
CD99-211ENST00000623253 RDH14Q9HBH5 336 aa16.27■□□□□ 0.2
CD99-211ENST00000623253 LMBRD1Q9NUN5 540 aa16.27■□□□□ 0.2
CD99-211ENST00000623253 AKAP7Q9P0M2 348 aaPredicted RBP16.27■□□□□ 0.2
CD99-211ENST00000623253 FZD10Q9ULW2 581 aa16.27■□□□□ 0.2
CD99-211ENST00000623253 CHD5Q8TDI0 1954 aa16.26■□□□□ 0.19
CD99-211ENST00000623253 SIGLEC16A6NMB1 481 aa16.26■□□□□ 0.19
CD99-211ENST00000623253 C9orf172C9J069 976 aa16.26■□□□□ 0.19
CD99-211ENST00000623253 FGF10O15520 208 aaPredicted RBP16.26■□□□□ 0.19
CD99-211ENST00000623253 ABCB7O75027 752 aa16.26■□□□□ 0.19
CD99-211ENST00000623253 PALMO75781 387 aa16.26■□□□□ 0.19
CD99-211ENST00000623253 CALB1P05937 261 aa16.26■□□□□ 0.19
CD99-211ENST00000623253 ELFN1P0C7U0 828 aa16.26■□□□□ 0.19
CD99-211ENST00000623253 SFTPCP11686 197 aa16.26■□□□□ 0.19
CD99-211ENST00000623253 PNLIPP16233 465 aa16.26■□□□□ 0.19
CD99-211ENST00000623253 SERPINA4P29622 427 aa16.26■□□□□ 0.19
CD99-211ENST00000623253 ALDH4A1P30038 563 aa16.26■□□□□ 0.19
CD99-211ENST00000623253 STAT1P42224 750 aa16.26■□□□□ 0.19
CD99-211ENST00000623253 KIAA1024LP59773 190 aa16.26■□□□□ 0.19
CD99-211ENST00000623253 TPI1P60174 286 aa16.26■□□□□ 0.19
CD99-211ENST00000623253 HLTFQ14527 1009 aaKnown RBP eCLIP16.26■□□□□ 0.19
CD99-211ENST00000623253 SYCP1Q15431 976 aa16.26■□□□□ 0.19
CD99-211ENST00000623253 CLEC16AQ2KHT3 1053 aa16.26■□□□□ 0.19
CD99-211ENST00000623253 SPECC1LQ69YQ0 1117 aa16.26■□□□□ 0.19
CD99-211ENST00000623253 DNAJC24Q6P3W2 148 aa16.26■□□□□ 0.19
CD99-211ENST00000623253 TMPRSS9Q7Z410 1059 aa16.26■□□□□ 0.19
CD99-211ENST00000623253 SRLQ86TD4 932 aa16.26■□□□□ 0.19
CD99-211ENST00000623253 PIM3Q86V86 326 aa16.26■□□□□ 0.19
CD99-211ENST00000623253 C3orf20Q8ND61 904 aa16.26■□□□□ 0.19
CD99-211ENST00000623253 ENOX1Q8TC92 643 aaKnown RBP16.26■□□□□ 0.19
CD99-211ENST00000623253 PCMTD1Q96MG8 357 aaPredicted RBP16.26■□□□□ 0.19
CD99-211ENST00000623253 MCEEQ96PE7 176 aa16.26■□□□□ 0.19
CD99-211ENST00000623253 TUBGCP5Q96RT8 1024 aa16.26■□□□□ 0.19
CD99-211ENST00000623253 LGR4Q9BXB1 951 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms