RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 RPS9P46781 194 aaKnown RBP14.18□□□□□ -0.14
LDB3-209ENST00000623056 GJA8P48165 433 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 BCAT1P54687 386 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 TAS2R39P59534 338 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 CDH17Q12864 832 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 BCL2A1Q16548 175 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 CCNYL2Q5T2Q4 361 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 CYHR1Q6ZMK1 362 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 USP51Q70EK9 711 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 PIGZQ86VD9 579 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 PDPRQ8NCN5 879 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 PNPT1Q8TCS8 783 aaKnown RBP14.18□□□□□ -0.14
LDB3-209ENST00000623056 ELMO2Q96JJ3 720 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 RMI1Q9H9A7 625 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 C8orf4Q9NR00 106 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 GIN1Q9NXP7 522 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 SEPT3Q9UH03 358 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 RAD54BQ9Y620 910 aa14.18□□□□□ -0.14
LDB3-209ENST00000623056 FAM72CH0Y354 149 aa14.17□□□□□ -0.14
LDB3-209ENST00000623056 NR5A2O00482 541 aa14.17□□□□□ -0.14
LDB3-209ENST00000623056 CNOT3O75175 753 aaKnown RBP14.17□□□□□ -0.14
LDB3-209ENST00000623056 SEC14L2O76054 403 aa14.17□□□□□ -0.14
LDB3-209ENST00000623056 KCNH1O95259 989 aa14.17□□□□□ -0.14
LDB3-209ENST00000623056 SNAP29O95721 258 aa14.17□□□□□ -0.14
LDB3-209ENST00000623056 HSD17B1P14061 328 aa14.17□□□□□ -0.14
LDB3-209ENST00000623056 PTPRAP18433 802 aa14.17□□□□□ -0.14
LDB3-209ENST00000623056 GPX3P22352 226 aa14.17□□□□□ -0.14
LDB3-209ENST00000623056 NOS2P35228 1153 aa14.17□□□□□ -0.14
LDB3-209ENST00000623056 POLD2P49005 469 aa14.17□□□□□ -0.14
LDB3-209ENST00000623056 RPL34P49207 117 aaKnown RBP14.17□□□□□ -0.14
LDB3-209ENST00000623056 ATP4BP51164 291 aa14.17□□□□□ -0.14
LDB3-209ENST00000623056 GJA9P57773 515 aa14.17□□□□□ -0.14
LDB3-209ENST00000623056 POU5F1BQ06416 359 aa14.17□□□□□ -0.14
LDB3-209ENST00000623056 FAM72AQ5TYM5 149 aa14.17□□□□□ -0.14
LDB3-209ENST00000623056 FAM72DQ6L9T8 149 aa14.17□□□□□ -0.14
LDB3-209ENST00000623056 ZNF280DQ6N043 979 aa14.17□□□□□ -0.14
LDB3-209ENST00000623056 ZNF773Q6PK81 442 aa14.17□□□□□ -0.14
LDB3-209ENST00000623056 GADL1Q6ZQY3 521 aa14.17□□□□□ -0.14
LDB3-209ENST00000623056 FAM72BQ86X60 149 aa14.17□□□□□ -0.14
LDB3-209ENST00000623056 CNTN4Q8IWV2 1026 aa14.17□□□□□ -0.14
LDB3-209ENST00000623056 GOLM1Q8NBJ4 401 aa14.17□□□□□ -0.14
LDB3-209ENST00000623056 ZNF280CQ8ND82 737 aa14.17□□□□□ -0.14
LDB3-209ENST00000623056 TRPV3Q8NET8 790 aa14.17□□□□□ -0.14
LDB3-209ENST00000623056 MAGEE2Q8TD90 523 aaPredicted RBP14.17□□□□□ -0.14
LDB3-209ENST00000623056 SNX19Q92543 992 aa14.17□□□□□ -0.14
LDB3-209ENST00000623056 GLT1D1Q96MS3 346 aa14.17□□□□□ -0.14
LDB3-209ENST00000623056 GPR20Q99678 358 aa14.17□□□□□ -0.14
LDB3-209ENST00000623056 IGSF5Q9NSI5 407 aa14.17□□□□□ -0.14
LDB3-209ENST00000623056 ATAD3AQ9NVI7 634 aa14.17□□□□□ -0.14
LDB3-209ENST00000623056 ACTR3BQ9P1U1 418 aa14.17□□□□□ -0.14
LDB3-209ENST00000623056 GPC6Q9Y625 555 aaPredicted RBP14.17□□□□□ -0.14
LDB3-209ENST00000623056 A0A087X1B8 175 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 TTC24A2A3L6 582 aaPredicted RBP14.16□□□□□ -0.14
LDB3-209ENST00000623056 A8MT66 165 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 BBIP1A8MTZ0 92 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 FZD9O00144 591 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 KPNA4O00629 521 aaPredicted RBP14.16□□□□□ -0.14
LDB3-209ENST00000623056 ARPC2O15144 300 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 ALDOCP09972 364 aaKnown RBP14.16□□□□□ -0.14
LDB3-209ENST00000623056 GFAPP14136 432 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 IREB2P48200 963 aaKnown RBP14.16□□□□□ -0.14
LDB3-209ENST00000623056 PLK1P53350 603 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 STX1BP61266 288 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 YBX1P67809 324 aaKnown RBP14.16□□□□□ -0.14
LDB3-209ENST00000623056 BNIP2Q12982 314 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 CSHL1Q14406 222 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 CAPRIN1Q14444 709 aaKnown RBP14.16□□□□□ -0.14
LDB3-209ENST00000623056 CLEC6AQ6EIG7 209 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 LARP4Q71RC2 724 aaKnown RBP eCLIP14.16□□□□□ -0.14
LDB3-209ENST00000623056 FAM35AQ86V20 835 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 NPWQ8N729 165 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 SCAIQ8N9R8 606 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 BPIFB6Q8NFQ5 453 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 OLFM1Q99784 485 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 HOPXQ9BPY8 73 aaPredicted RBP14.16□□□□□ -0.14
LDB3-209ENST00000623056 CMTM6Q9NX76 183 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 PSME2Q9UL46 239 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 EVPLQ92817 2033 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 A0A0J9YYE9 177 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 AQP9O43315 295 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 B4GAT1O43505 415 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 IPO13O94829 963 aaKnown RBP14.16□□□□□ -0.14
LDB3-209ENST00000623056 MBL2P11226 248 aaPredicted RBP14.16□□□□□ -0.14
LDB3-209ENST00000623056 JUNBP17275 347 aaPredicted RBP14.16□□□□□ -0.14
LDB3-209ENST00000623056 ARF4P18085 180 aaPredicted RBP14.16□□□□□ -0.14
LDB3-209ENST00000623056 RPS12P25398 132 aaKnown RBP14.16□□□□□ -0.14
LDB3-209ENST00000623056 KPNA2P52292 529 aaKnown RBP14.16□□□□□ -0.14
LDB3-209ENST00000623056 SEPT6Q14141 434 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 OXA1LQ15070 435 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 FAM187BQ17R55 369 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 TECRLQ5HYJ1 363 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 NBPF12Q5TAG4 269 aaPredicted RBP14.16□□□□□ -0.14
LDB3-209ENST00000623056 PRMT9Q6P2P2 845 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 PDZD4Q76G19 769 aaPredicted RBP14.16□□□□□ -0.14
LDB3-209ENST00000623056 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.16□□□□□ -0.14
LDB3-209ENST00000623056 RAB2BQ8WUD1 216 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 ERLEC1Q96DZ1 483 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 SNX27Q96L92 541 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 CSF3RQ99062 836 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 CXCL16Q9H2A7 254 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms