RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 MAPRE2Q15555 327 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 ZACNQ401N2 412 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 BROXQ5VW32 411 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 TDRD10Q5VZ19 366 aaKnown RBP10.42□□□□□ -0.74
VPS11-207ENST00000620429 LINC00523Q86TU6 105 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 IGDCC3Q8IVU1 814 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 PHF10Q8WUB8 498 aaKnown RBP10.42□□□□□ -0.74
VPS11-207ENST00000620429 ANKRD49Q8WVL7 239 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 USP13Q92995 863 aaPredicted RBP10.42□□□□□ -0.74
VPS11-207ENST00000620429 SORT1Q99523 831 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 PDCD2LQ9BRP1 358 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 FARSBQ9NSD9 589 aaKnown RBP10.42□□□□□ -0.74
VPS11-207ENST00000620429 PNPOQ9NVS9 261 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 IFT80Q9P2H3 777 aaPredicted RBP10.42□□□□□ -0.74
VPS11-207ENST00000620429 HCN4Q9Y3Q4 1203 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 SAGE2PA6NJ88 616 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 KBTBD13C9JR72 458 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 DLGAP3O95886 979 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 SERPINE1P05121 402 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 MMP8P22894 467 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 GABRB2P47870 512 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 NDST1P52848 882 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 SP4Q02446 784 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 TRAP1Q12931 704 aaKnown RBP10.42□□□□□ -0.74
VPS11-207ENST00000620429 LAMC2Q13753 1193 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 SMTNL2Q2TAL5 461 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 LEXMQ3ZCV2 418 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 PAGE2BQ5JRK9 111 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 FAM182AQ5T1J6 154 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 DESI1Q6ICB0 168 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 SYCE2Q6PIF2 218 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 EPGNQ6UW88 154 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 POLNQ7Z5Q5 900 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 IFNL1Q8IU54 200 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 C4orf19Q8IY42 314 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 LILRB2Q8N423 598 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 SFRP1Q8N474 314 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 RNF148Q8N7C7 305 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 ZSCAN18Q8TBC5 510 aaPredicted RBP10.42□□□□□ -0.74
VPS11-207ENST00000620429 TMEM80Q96HE8 168 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 RIPOR3Q96MK2 946 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 FUNDC2Q9BWH2 189 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 MUC3BQ9H195 1237 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 RSPH9Q9H1X1 276 aaPredicted RBP10.42□□□□□ -0.74
VPS11-207ENST00000620429 APOBEC3GQ9HC16 384 aaKnown RBP10.42□□□□□ -0.74
VPS11-207ENST00000620429 PXMP2Q9NR77 195 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 RNF146Q9NTX7 359 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 SYBUQ9NX95 663 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 CNOT6Q9ULM6 557 aaKnown RBP10.42□□□□□ -0.74
VPS11-207ENST00000620429 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.42□□□□□ -0.74
VPS11-207ENST00000620429 NDUFS2O75306 463 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 AVILO75366 819 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 TADA2AO75478 443 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 DNAJB5O75953 348 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 PTPN7P35236 360 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 ARCN1P48444 511 aaKnown RBP10.42□□□□□ -0.74
VPS11-207ENST00000620429 HARS2P49590 506 aaKnown RBP10.42□□□□□ -0.74
VPS11-207ENST00000620429 HK2P52789 917 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 ATXN3P54252 364 aaPredicted RBP10.42□□□□□ -0.74
VPS11-207ENST00000620429 WNT7BP56706 349 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 MPP1Q00013 466 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 SLC10A2Q12908 348 aaPredicted RBP10.42□□□□□ -0.74
VPS11-207ENST00000620429 KRR1Q13601 381 aaKnown RBP10.42□□□□□ -0.74
VPS11-207ENST00000620429 CBX2Q14781 532 aaPredicted RBP10.42□□□□□ -0.74
VPS11-207ENST00000620429 DGUOKQ16854 277 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 VWA5B1Q5TIE3 1220 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 ARHGEF16Q5VV41 709 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 KCNT2Q6UVM3 1135 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 UNC45BQ8IWX7 931 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 ZNF606Q8WXB4 792 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 TWNKQ96RR1 684 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 MCMBPQ9BTE3 642 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 TRIM15Q9C019 465 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 IFT22Q9H7X7 185 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 IGSF5Q9NSI5 407 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 AFG3L2Q9Y4W6 797 aa10.42□□□□□ -0.74
VPS11-207ENST00000620429 CFLARO15519 480 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 OR7A10O76100 309 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 C4BPAP04003 597 aaKnown RBP10.41□□□□□ -0.74
VPS11-207ENST00000620429 PTPRAP18433 802 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 IL12AP29459 219 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 GRIA1P42261 906 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 HTR3AP46098 478 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 ACOT2P49753 483 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 NRLP54845 237 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 BACE1P56817 501 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 CBLBQ13191 982 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 CTF1Q16619 201 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 PLA2G4EQ3MJ16 856 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 KCNT1Q5JUK3 1230 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 MAP1SQ66K74 1059 aaPredicted RBP10.41□□□□□ -0.74
VPS11-207ENST00000620429 BBS12Q6ZW61 710 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 USP51Q70EK9 711 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 ERMP1Q7Z2K6 904 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 WDR49Q8IV35 697 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 PPM1NQ8N819 430 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 FAM71DQ8N9W8 422 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 POC5Q8NA72 575 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 PSD4Q8NDX1 1056 aa10.41□□□□□ -0.74
VPS11-207ENST00000620429 BEST2Q8NFU1 509 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms