RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 SYBUQ9NX95 663 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 MUTYHQ9UIF7 546 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 SARDHQ9UL12 918 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 MAD1L1Q9Y6D9 718 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 CHD5Q8TDI0 1954 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 UNC80Q8N2C7 3258 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 A0A0J9YYE9 177 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 FAM237BA0A1B0GVD1 139 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 A0A1W2PQF6 199 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 C16orf96A6NNT2 1141 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 CHURC1-FNTBB4DL54 471 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 C1QTNF3-AMACRE9PGA6 284 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 RNASEH1O60930 286 aaKnown RBP8.06□□□□□ -1.12
CPNE3-209ENST00000620393 CPP00450 1065 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 IL1BP01584 269 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 TRBC1P01850 177 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 GSTA2P09210 222 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 TARSP26639 723 aaKnown RBP8.06□□□□□ -1.12
CPNE3-209ENST00000620393 HNF1BP35680 557 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 ABL2P42684 1182 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 SUOXP51687 545 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 CRADDP78560 199 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 ZXDAP98168 799 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 SATB1Q01826 763 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 LRRC32Q14392 662 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 FASTKD3Q14CZ7 662 aaKnown RBP8.06□□□□□ -1.12
CPNE3-209ENST00000620393 CDKN3Q16667 212 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 UGP2Q16851 508 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 ANKRD20A4Q4UJ75 823 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 CFAP58Q5T655 872 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 KIAA1211LQ6NV74 962 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 CASC4Q6P4E1 433 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 C3orf62Q6ZUJ4 267 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 CYS1Q717R9 158 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 NLRP9Q7RTR0 991 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 TTC7BQ86TV6 843 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 TMEM135Q86UB9 458 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 ZSWIM9Q86XI8 627 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 MMAAQ8IVH4 418 aaKnown RBP8.06□□□□□ -1.12
CPNE3-209ENST00000620393 SIX5Q8N196 739 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 PAF1Q8N7H5 531 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 OR2T3Q8NH03 318 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 RPLP0P6Q8NHW5 317 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 GRIN3AQ8TCU5 1115 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 TTC25Q96NG3 672 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 SMIM14Q96QK8 99 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 LYSMD1Q96S90 227 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 WDR83Q9BRX9 315 aaKnown RBP8.06□□□□□ -1.12
CPNE3-209ENST00000620393 OSBPL6Q9BZF3 934 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 PABPC3Q9H361 631 aaKnown RBP8.06□□□□□ -1.12
CPNE3-209ENST00000620393 CDC42EP4Q9H3Q1 356 aaKnown RBP8.06□□□□□ -1.12
CPNE3-209ENST00000620393 FBRSQ9HAH7 460 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 MRM3Q9HC36 420 aaKnown RBP8.06□□□□□ -1.12
CPNE3-209ENST00000620393 LRRC4CQ9HCJ2 640 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 CD248Q9HCU0 757 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 CHRAC1Q9NRG0 131 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 NINJ2Q9NZG7 142 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 HACD3Q9P035 362 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 ZC3H7BQ9UGR2 993 aaKnown RBP8.06□□□□□ -1.12
CPNE3-209ENST00000620393 RIMKLBQ9ULI2 386 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 MMP17Q9ULZ9 603 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 SOX13Q9UN79 622 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 CHMP2BQ9UQN3 213 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 MTF2Q9Y483 593 aaPredicted RBP8.06□□□□□ -1.12
CPNE3-209ENST00000620393 TCAF1Q9Y4C2 921 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 SPO11Q9Y5K1 396 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 FAM169AQ9Y6X4 670 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 NYNRINQ9P2P1 1898 aaKnown RBP8.06□□□□□ -1.12
CPNE3-209ENST00000620393 KIF26AQ9ULI4 1882 aaPredicted RBP8.06□□□□□ -1.12
CPNE3-209ENST00000620393 MYO10Q9HD67 2058 aa8.06□□□□□ -1.12
CPNE3-209ENST00000620393 HEATR9A2RTY3 570 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 MROH6A6NGR9 719 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 C2orf81A6NN90 581 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 KPNA3O00505 521 aaPredicted RBP8.05□□□□□ -1.12
CPNE3-209ENST00000620393 AURKAO14965 403 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 RIPK2O43353 540 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 LDB2O43679 373 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 ATG13O75143 517 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 SPAG6O75602 509 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 USP1O94782 785 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 ALDH1A2O94788 518 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 PAPSS2O95340 614 aaPredicted RBP8.05□□□□□ -1.12
CPNE3-209ENST00000620393 CRTAMO95727 393 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 POLBP06746 335 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 PIRTP0C851 137 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 HOXB2P14652 356 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 CTPS1P17812 591 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 PGAM1P18669 254 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 C5AR1P21730 350 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 PSMA3P25788 255 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 NFKBIAP25963 317 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 ITGB7P26010 798 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 SSTR1P30872 391 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 HSD17B3P37058 310 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 MLLT3P42568 568 aaPredicted RBP8.05□□□□□ -1.12
CPNE3-209ENST00000620393 COPAP53621 1224 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 GPX6P59796 221 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 RPS14P62263 151 aaKnown RBP8.05□□□□□ -1.12
CPNE3-209ENST00000620393 CCDC15Q0P6D6 951 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 SLC29A2Q14542 456 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms