RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 GPNMBQ14956 572 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 CA9Q16790 459 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 KIF19Q2TAC6 998 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 LSM12Q3MHD2 195 aaKnown RBP7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 HSF5Q4G112 596 aaPredicted RBP7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 CTXN3Q4LDR2 81 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 INTS6LQ5JSJ4 861 aaKnown RBP7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 LAYNQ6UX15 382 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 CLEC20AQ6ZU45 233 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 ANKRD33Q7Z3H0 272 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 ZDHHC17Q8IUH5 632 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 COLGALT2Q8IYK4 626 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 NUP93Q8N1F7 819 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 PQLC3Q8N755 202 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 SMARCD1Q96GM5 515 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 B3GALT6Q96L58 329 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 TOX2Q96NM4 488 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 OR52B2Q96RD2 323 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 TMEM209Q96SK2 561 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 ULBP1Q9BZM6 244 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 IARS2Q9NSE4 1012 aaKnown RBP7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 MOCS1Q9NZB8 636 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 HCSTQ9UBK5 93 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 STAP1Q9ULZ2 295 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 RUVBL2Q9Y230 463 aaKnown RBP7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 H3BSA7 217 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 C2P06681 752 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 NELFEP18615 380 aaKnown RBP7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 HMOX2P30519 316 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 ADSLP30566 484 aaPredicted RBP7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 CA8P35219 290 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 HADHAP40939 763 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 GJA8P48165 433 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 NME3Q13232 169 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 INPP5AQ14642 412 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 MAPRE1Q15691 268 aaKnown RBP7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 SLC39A12Q504Y0 691 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 PKDCCQ504Y2 493 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 PPM1LQ5SGD2 360 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 LIPMQ5VYY2 423 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 KCNMB4Q86W47 210 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 ERI1Q8IV48 349 aaKnown RBP7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 DEFB106AQ8N104 65 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 PCDH20Q8N6Y1 951 aaKnown RBP7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 DDHD1Q8NEL9 900 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 TNIP2Q8NFZ5 429 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 TRPC4APQ8TEL6 797 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 NRBF2Q96F24 287 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 PKP2Q99959 881 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 GATA5Q9BWX5 397 aaPredicted RBP7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 MRPL9Q9BYD2 267 aaKnown RBP7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 NCKIPSDQ9NZQ3 722 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 A0A0J9YVX5 310 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 MYOCOSA0A1B0GUC4 107 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 AP1G1O43747 822 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 ZBTB14O43829 449 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 USP12O75317 370 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 HSPA1AP0DMV8 641 aaKnown RBP7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 HSPA1BP0DMV9 641 aaKnown RBP7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 ACRP10323 421 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 L1CAMP32004 1257 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 AVPR1AP37288 418 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 LIMK2P53671 638 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 PSME3P61289 254 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 ANO4Q32M45 955 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 OLFML1Q6UWY5 402 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 CYP2R1Q6VVX0 501 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 PAQR9Q6ZVX9 377 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 CYS1Q717R9 158 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 PTAR1Q7Z6K3 402 aaPredicted RBP7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 DCP1BQ8IZD4 617 aaKnown RBP7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 OR52K1Q8NGK4 314 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 OR10T2Q8NGX3 314 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 SHKBP1Q8TBC3 707 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 TIFAQ96CG3 184 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 CSPG4P5Q96PW8 444 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 RBBP8Q99708 897 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 NPAS2Q99743 824 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 RBCK1Q9BYM8 510 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 ELAC1Q9H777 363 aaKnown RBP7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 CAB39LQ9H9S4 337 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 CLK4Q9HAZ1 481 aaKnown RBP7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 EML4Q9HC35 981 aaKnown RBP7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 SH3GLB1Q9Y371 365 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 PSAT1Q9Y617 370 aa7.03□□□□□ -1.28
SRGAP3-213ENST00000618999 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 KCNK1O00180 336 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 EEF2KO00418 725 aaKnown RBP7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 SLC22A2O15244 555 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 H6PDO95479 791 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 SPATA31D3P0C874 917 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 MAGEA6P43360 314 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 SLC11A1P49279 550 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 PABPC1LQ4VXU2 614 aaKnown RBP7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 AGKQ53H12 422 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 SPATA31D4Q6ZUB0 917 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 PCYOX1LQ8NBM8 494 aa7.02□□□□□ -1.29
SRGAP3-213ENST00000618999 PDZD8Q8NEN9 1154 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms