RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-223ENST00000618944 ATP6V0D2Q8N8Y2 350 aa11.25□□□□□ -0.61
TP53-223ENST00000618944 ARRDC2Q8TBH0 407 aa11.25□□□□□ -0.61
TP53-223ENST00000618944 IFT43Q96FT9 208 aa11.25□□□□□ -0.61
TP53-223ENST00000618944 MAELQ96JY0 434 aaKnown RBP11.25□□□□□ -0.61
TP53-223ENST00000618944 UBXN10Q96LJ8 280 aa11.25□□□□□ -0.61
TP53-223ENST00000618944 LRGUKQ96M69 825 aa11.25□□□□□ -0.61
TP53-223ENST00000618944 FAM193BQ96PV7 902 aaPredicted RBP11.25□□□□□ -0.61
TP53-223ENST00000618944 SEPT5Q99719 369 aaPredicted RBP11.25□□□□□ -0.61
TP53-223ENST00000618944 MRPL1Q9BYD6 325 aaKnown RBP11.25□□□□□ -0.61
TP53-223ENST00000618944 PCDHAC1Q9H158 963 aa11.25□□□□□ -0.61
TP53-223ENST00000618944 FBXO44Q9H4M3 255 aa11.25□□□□□ -0.61
TP53-223ENST00000618944 EML4Q9HC35 981 aaKnown RBP11.25□□□□□ -0.61
TP53-223ENST00000618944 ZDHHC7Q9NXF8 308 aa11.25□□□□□ -0.61
TP53-223ENST00000618944 MARCH2Q9P0N8 246 aa11.25□□□□□ -0.61
TP53-223ENST00000618944 PSMD13Q9UNM6 376 aa11.25□□□□□ -0.61
TP53-223ENST00000618944 MROH6A6NGR9 719 aa11.25□□□□□ -0.61
TP53-223ENST00000618944 UBDO15205 165 aa11.25□□□□□ -0.61
TP53-223ENST00000618944 RAMP2O60895 175 aa11.25□□□□□ -0.61
TP53-223ENST00000618944 RBP1P09455 135 aa11.25□□□□□ -0.61
TP53-223ENST00000618944 FCGRTP55899 365 aa11.25□□□□□ -0.61
TP53-223ENST00000618944 NME5P56597 212 aa11.25□□□□□ -0.61
TP53-223ENST00000618944 INHBEP58166 350 aa11.25□□□□□ -0.61
TP53-223ENST00000618944 NRG1Q02297 640 aaPredicted RBP11.25□□□□□ -0.61
TP53-223ENST00000618944 PDAP1Q13442 181 aaKnown RBP11.25□□□□□ -0.61
TP53-223ENST00000618944 BIRC2Q13490 618 aa11.25□□□□□ -0.61
TP53-223ENST00000618944 ACAP2Q15057 778 aa11.25□□□□□ -0.61
TP53-223ENST00000618944 TRIM71Q2Q1W2 868 aaKnown RBP11.25□□□□□ -0.61
TP53-223ENST00000618944 MGAT5BQ3V5L5 792 aa11.25□□□□□ -0.61
TP53-223ENST00000618944 FAM171A1Q5VUB5 890 aa11.25□□□□□ -0.61
TP53-223ENST00000618944 ISCA2Q86U28 154 aa11.25□□□□□ -0.61
TP53-223ENST00000618944 DNAJC1Q96KC8 554 aaKnown RBP11.25□□□□□ -0.61
TP53-223ENST00000618944 KLHL32Q96NJ5 620 aa11.25□□□□□ -0.61
TP53-223ENST00000618944 FBRSL1Q9HCM7 1045 aaKnown RBP11.25□□□□□ -0.61
TP53-223ENST00000618944 NMRK2Q9NPI5 230 aa11.25□□□□□ -0.61
TP53-223ENST00000618944 RGS18Q9NS28 235 aa11.25□□□□□ -0.61
TP53-223ENST00000618944 PDP2Q9P2J9 529 aa11.25□□□□□ -0.61
TP53-223ENST00000618944 TRAF6Q9Y4K3 522 aa11.25□□□□□ -0.61
TP53-223ENST00000618944 PCDHB5Q9Y5E4 795 aa11.25□□□□□ -0.61
TP53-223ENST00000618944 AK5Q9Y6K8 562 aa11.25□□□□□ -0.61
TP53-223ENST00000618944 SCN10AQ9Y5Y9 1956 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 LRRC14BA6NHZ5 514 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 PPP6CO00743 305 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 SLC22A2O15244 555 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 LDB2O43679 373 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 GOT2P00505 430 aaKnown RBP11.24□□□□□ -0.61
TP53-223ENST00000618944 ATXN1LP0C7T5 689 aaKnown RBP11.24□□□□□ -0.61
TP53-223ENST00000618944 CAP1Q01518 475 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 PDK3Q15120 406 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 OGFRL1Q5TC84 451 aaPredicted RBP11.24□□□□□ -0.61
TP53-223ENST00000618944 PAOXQ6QHF9 649 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 SLC24A5Q71RS6 500 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 LILRA2Q8N149 483 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 GALNT4Q8N4A0 578 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 OR9I1Q8NGQ6 314 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 OR13C4Q8NGS5 318 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 HMGCLL1Q8TB92 370 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 GIPC2Q8TF65 315 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 PTERQ96BW5 349 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 TSPAN17Q96FV3 270 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 DCUN1D1Q96GG9 259 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 BTN2A3PQ96KV6 586 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 C8orf48Q96LL4 319 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 PKP2Q99959 881 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 CRISPLD1Q9H336 500 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 VPS45Q9NRW7 570 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 A0A0D9SEW6 157 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 E7ENX8 843 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 PSMD12O00232 456 aaPredicted RBP11.24□□□□□ -0.61
TP53-223ENST00000618944 CASQ2O14958 399 aaPredicted RBP11.24□□□□□ -0.61
TP53-223ENST00000618944 SLC7A4O43246 635 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 CKBP12277 381 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 PRKAR2AP13861 404 aaKnown RBP11.24□□□□□ -0.61
TP53-223ENST00000618944 ADSLP30566 484 aaPredicted RBP11.24□□□□□ -0.61
TP53-223ENST00000618944 KCNQ1P51787 676 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 PSME3P61289 254 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 DSC1Q08554 894 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 PTK2BQ14289 1009 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 FASTKQ14296 549 aaKnown RBP11.24□□□□□ -0.61
TP53-223ENST00000618944 SEMA3AQ14563 771 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 MBTPS1Q14703 1052 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 HERC3Q15034 1050 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 NFE2Q16621 373 aaPredicted RBP11.24□□□□□ -0.61
TP53-223ENST00000618944 FBXO48Q5FWF7 155 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 MAP3K21Q5TCX8 1036 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 CCSAPQ6IQ19 270 aaPredicted RBP11.24□□□□□ -0.61
TP53-223ENST00000618944 MSANTD2Q6P1R3 559 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 ZNF549Q6P9A3 640 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 PELI3Q8N2H9 469 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 LINC01599Q8WXQ3 324 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 RANBP9Q96S59 729 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 GPR62Q9BZJ7 368 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 MFSD1Q9H3U5 465 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 GSTO2Q9H4Y5 243 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 CCSER2Q9H7U1 834 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 C6orf203Q9P0P8 240 aaPredicted RBP11.24□□□□□ -0.61
TP53-223ENST00000618944 HCSTQ9UBK5 93 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 PCDHGB4Q9UN71 923 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 PCDHGB5Q9Y5G0 923 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 PTGDR2Q9Y5Y4 395 aa11.24□□□□□ -0.61
TP53-223ENST00000618944 NYNRINQ9P2P1 1898 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms