RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 ARNT2Q9HBZ2 717 aa16.37■□□□□ 0.21
SNAP47-213ENST00000617596 TRPV5Q9NQA5 729 aa16.37■□□□□ 0.21
SNAP47-213ENST00000617596 SLC8A2Q9UPR5 921 aa16.37■□□□□ 0.21
SNAP47-213ENST00000617596 SHISA7A6NL88 538 aa16.36■□□□□ 0.21
SNAP47-213ENST00000617596 BUD23O43709 281 aaKnown RBP16.36■□□□□ 0.21
SNAP47-213ENST00000617596 SIN3BO75182 1162 aa16.36■□□□□ 0.21
SNAP47-213ENST00000617596 ATP6V1G2O95670 118 aa16.36■□□□□ 0.21
SNAP47-213ENST00000617596 POP4O95707 220 aaKnown RBP16.36■□□□□ 0.21
SNAP47-213ENST00000617596 NDST3O95803 873 aa16.36■□□□□ 0.21
SNAP47-213ENST00000617596 CTPS1P17812 591 aa16.36■□□□□ 0.21
SNAP47-213ENST00000617596 ZP2Q05996 745 aa16.36■□□□□ 0.21
SNAP47-213ENST00000617596 MSLNQ13421 630 aaPredicted RBP16.36■□□□□ 0.21
SNAP47-213ENST00000617596 SEPT6Q14141 434 aa16.36■□□□□ 0.21
SNAP47-213ENST00000617596 ITIH4Q14624 930 aa16.36■□□□□ 0.21
SNAP47-213ENST00000617596 ARSIQ5FYB1 569 aa16.36■□□□□ 0.21
SNAP47-213ENST00000617596 LRRC73Q5JTD7 316 aa16.36■□□□□ 0.21
SNAP47-213ENST00000617596 FSTL4Q6MZW2 842 aa16.36■□□□□ 0.21
SNAP47-213ENST00000617596 RALGPS2Q86X27 583 aaPredicted RBP16.36■□□□□ 0.21
SNAP47-213ENST00000617596 CHPFQ8IZ52 775 aa16.36■□□□□ 0.21
SNAP47-213ENST00000617596 STK40Q8N2I9 435 aa16.36■□□□□ 0.21
SNAP47-213ENST00000617596 ZNF513Q8N8E2 541 aaPredicted RBP16.36■□□□□ 0.21
SNAP47-213ENST00000617596 UCMAQ8WVF2 138 aa16.36■□□□□ 0.21
SNAP47-213ENST00000617596 DNASE1L2Q92874 299 aa16.36■□□□□ 0.21
SNAP47-213ENST00000617596 MFSD3Q96ES6 412 aa16.36■□□□□ 0.21
SNAP47-213ENST00000617596 SH3GL3Q99963 347 aa16.36■□□□□ 0.21
SNAP47-213ENST00000617596 IL22Q9GZX6 179 aa16.36■□□□□ 0.21
SNAP47-213ENST00000617596 THAP10Q9P2Z0 257 aaPredicted RBP16.36■□□□□ 0.21
SNAP47-213ENST00000617596 SPO11Q9Y5K1 396 aa16.36■□□□□ 0.21
SNAP47-213ENST00000617596 NFS1Q9Y697 457 aa16.36■□□□□ 0.21
SNAP47-213ENST00000617596 WASF2Q9Y6W5 498 aa16.36■□□□□ 0.21
SNAP47-213ENST00000617596 BPTFQ12830 3046 aa16.36■□□□□ 0.21
SNAP47-213ENST00000617596 AURKAO14965 403 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 FZD6O60353 706 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 LEFTY1O75610 366 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 PGLSO95336 258 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 SLC4A1P02730 911 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 EPHX1P07099 455 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 ALPIP09923 528 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 SRFP11831 508 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 KIR2DL1P43626 348 aaPredicted RBP16.35■□□□□ 0.21
SNAP47-213ENST00000617596 NPY2RP49146 381 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 METAP1P53582 386 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 PPP2R2AP63151 447 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 HNRNPA1L2Q32P51 320 aaKnown RBP16.35■□□□□ 0.21
SNAP47-213ENST00000617596 SLC44A4Q53GD3 710 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 CEP128Q6ZU80 1094 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 ADHFE1Q8IWW8 467 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 FCRL3Q96P31 734 aaPredicted RBP16.35■□□□□ 0.21
SNAP47-213ENST00000617596 SPATS2LQ9NUQ6 558 aaKnown RBP16.35■□□□□ 0.21
SNAP47-213ENST00000617596 SAMD15Q9P1V8 674 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 KCTD3Q9Y597 815 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 COL4A2P08572 1712 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 ATG2BQ96BY7 2078 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.35■□□□□ 0.21
SNAP47-213ENST00000617596 A8MX80 341 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 ANKRD66B4E2M5 251 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 EPOP01588 193 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 HLA-DPA1P20036 260 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 NMBRP28336 390 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 SERPINA4P29622 427 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 ABL2P42684 1182 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 MAPK8P45983 427 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 ELF3P78545 371 aaPredicted RBP16.35■□□□□ 0.21
SNAP47-213ENST00000617596 PTPRCAPQ14761 206 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 EFTUD2Q15029 972 aaKnown RBP eCLIP16.35■□□□□ 0.21
SNAP47-213ENST00000617596 SLC14A2Q15849 920 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 QPCTQ16769 361 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 TMEM196Q5HYL7 178 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 RALGPS1Q5JS13 557 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 C9orf64Q5T6V5 341 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 ARMC12Q5T9G4 340 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 TRMT10BQ6PF06 316 aaKnown RBP16.35■□□□□ 0.21
SNAP47-213ENST00000617596 TPRG1Q6ZUI0 275 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 CACUL1Q86Y37 369 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 APLFQ8IW19 511 aaPredicted RBP16.35■□□□□ 0.21
SNAP47-213ENST00000617596 LRRC39Q96DD0 335 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 MRRFQ96E11 262 aaKnown RBP16.35■□□□□ 0.21
SNAP47-213ENST00000617596 KLHL32Q96NJ5 620 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 HEPHQ9BQS7 1158 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 C8orf33Q9H7E9 229 aaPredicted RBP16.35■□□□□ 0.21
SNAP47-213ENST00000617596 THEGQ9P2T0 379 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 SLC2A6Q9UGQ3 507 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 SARDHQ9UL12 918 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 CA14Q9ULX7 337 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 ARL5AQ9Y689 179 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 STON1Q9Y6Q2 735 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 RPS6KL1Q9Y6S9 549 aa16.35■□□□□ 0.21
SNAP47-213ENST00000617596 MUC3AQ02505 3323 aa16.34■□□□□ 0.21
SNAP47-213ENST00000617596 HTRA2O43464 458 aaPredicted RBP16.34■□□□□ 0.21
SNAP47-213ENST00000617596 FGF1P05230 155 aa16.34■□□□□ 0.21
SNAP47-213ENST00000617596 ALADP13716 330 aa16.34■□□□□ 0.21
SNAP47-213ENST00000617596 PGAM1P18669 254 aa16.34■□□□□ 0.21
SNAP47-213ENST00000617596 VASPP50552 380 aaPredicted RBP16.34■□□□□ 0.21
SNAP47-213ENST00000617596 EPHB1P54762 984 aa16.34■□□□□ 0.21
SNAP47-213ENST00000617596 NUDT18Q6ZVK8 323 aa16.34■□□□□ 0.21
SNAP47-213ENST00000617596 FBF1Q8TES7 1133 aa16.34■□□□□ 0.21
SNAP47-213ENST00000617596 PIH1D2Q8WWB5 315 aa16.34■□□□□ 0.21
SNAP47-213ENST00000617596 ADGRE3Q9BY15 652 aa16.34■□□□□ 0.21
SNAP47-213ENST00000617596 CPEB1Q9BZB8 566 aaKnown RBP16.34■□□□□ 0.21
SNAP47-213ENST00000617596 SUV39H2Q9H5I1 410 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms