RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 GJA1P17302 382 aa15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 SKIV2L2P42285 1042 aaKnown RBP15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 CDH4P55283 916 aa15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 WDR5P61964 334 aaKnown RBP15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 PRAMEP78395 509 aa15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 SMAD3P84022 425 aaKnown RBP15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 ZXDBP98169 803 aa15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 ZNF177Q13360 481 aaPredicted RBP15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 SMUG1Q53HV7 270 aa15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 FSCBQ5H9T9 825 aa15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 RABGAP1LQ5R372 815 aa15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 TMEM150AQ86TG1 271 aa15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 FSTL5Q8N475 847 aaPredicted RBP15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 CARNMT1Q8N4J0 409 aa15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 ZNF781Q8N8C0 355 aa15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 RAB3IL1Q8TBN0 382 aa15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 PPP4R1Q8TF05 950 aa15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 TSNARE1Q96NA8 513 aa15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 CDK5RAP1Q96SZ6 601 aaKnown RBP15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 OLFM1Q99784 485 aa15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 CINPQ9BW66 212 aaPredicted RBP15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 LRMDAQ9H2I8 198 aa15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 SPG21Q9NZD8 308 aa15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 ATXN10Q9UBB4 475 aa15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 UBA2Q9UBT2 640 aaPredicted RBP15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 CRYL1Q9Y2S2 319 aa15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 TEX28O15482 410 aa15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 HSPA4LO95757 839 aa15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 RAB10P61026 200 aa15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 CYP4F8P98187 520 aa15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 UGP2Q16851 508 aa15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 EML3Q32P44 896 aa15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 PDCD6IPQ8WUM4 868 aaKnown RBP15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 PTCD2Q8WV60 388 aaKnown RBP15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 MIPEPQ99797 713 aa15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 GATA5Q9BWX5 397 aaPredicted RBP15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 PRKD2Q9BZL6 878 aa15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 CRISPLD2Q9H0B8 497 aa15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 MRM3Q9HC36 420 aaKnown RBP15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 XPR1Q9UBH6 696 aa15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 ACOT9Q9Y305 439 aa15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 MYO7AQ13402 2215 aa15.65■□□□□ 0.1
SEMA3B-212ENST00000616701 ZBBXA8MT70 800 aa15.64■□□□□ 0.09
SEMA3B-212ENST00000616701 SLC12A1Q13621 1099 aa15.64■□□□□ 0.09
SEMA3B-212ENST00000616701 CSHL1Q14406 222 aa15.64■□□□□ 0.09
SEMA3B-212ENST00000616701 WDR75Q8IWA0 830 aaKnown RBP15.64■□□□□ 0.09
SEMA3B-212ENST00000616701 IQCF2Q8IXL9 164 aa15.64■□□□□ 0.09
SEMA3B-212ENST00000616701 KLF16Q9BXK1 252 aaPredicted RBP15.64■□□□□ 0.09
SEMA3B-212ENST00000616701 WWP1Q9H0M0 922 aa15.64■□□□□ 0.09
SEMA3B-212ENST00000616701 MAN1C1Q9NR34 630 aa15.64■□□□□ 0.09
SEMA3B-212ENST00000616701 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.64■□□□□ 0.096e-6■□□□□ 8.7
SEMA3B-212ENST00000616701 RABL2AQ9UBK7 228 aaPredicted RBP15.64■□□□□ 0.09
SEMA3B-212ENST00000616701 LOC285095A0A1B0GVY8 99 aa15.64■□□□□ 0.09
SEMA3B-212ENST00000616701 EIF3FO00303 357 aaPredicted RBP15.64■□□□□ 0.09
SEMA3B-212ENST00000616701 LDB2O43679 373 aa15.64■□□□□ 0.09
SEMA3B-212ENST00000616701 SLC12A2P55011 1212 aa15.64■□□□□ 0.09
SEMA3B-212ENST00000616701 KDSRQ06136 332 aa15.64■□□□□ 0.09
SEMA3B-212ENST00000616701 LCA5Q86VQ0 697 aa15.64■□□□□ 0.09
SEMA3B-212ENST00000616701 NSL1Q96IY1 281 aa15.64■□□□□ 0.09
SEMA3B-212ENST00000616701 LBHD1Q9BQE6 289 aaPredicted RBP15.64■□□□□ 0.09
SEMA3B-212ENST00000616701 MAGEH1Q9H213 219 aa15.64■□□□□ 0.09
SEMA3B-212ENST00000616701 UTP6Q9NYH9 597 aaKnown RBP15.64■□□□□ 0.09
SEMA3B-212ENST00000616701 PCDHGC4Q9Y5F7 938 aa15.64■□□□□ 0.09
SEMA3B-212ENST00000616701 INSL5Q9Y5Q6 135 aa15.64■□□□□ 0.09
SEMA3B-212ENST00000616701 NEMP2A6NFY4 417 aa15.63■□□□□ 0.09
SEMA3B-212ENST00000616701 NRG2O14511 850 aaPredicted RBP15.63■□□□□ 0.09
SEMA3B-212ENST00000616701 TBL1XO60907 577 aa15.63■□□□□ 0.09
SEMA3B-212ENST00000616701 ATP5HO75947 161 aa15.63■□□□□ 0.09
SEMA3B-212ENST00000616701 SERPINF2P08697 491 aa15.63■□□□□ 0.09
SEMA3B-212ENST00000616701 MZF1P28698 734 aaPredicted RBP15.63■□□□□ 0.09
SEMA3B-212ENST00000616701 PABPC1LQ4VXU2 614 aaKnown RBP15.63■□□□□ 0.09
SEMA3B-212ENST00000616701 ADGRF1Q5T601 910 aa15.63■□□□□ 0.09
SEMA3B-212ENST00000616701 FAM219BQ5XKK7 198 aa15.63■□□□□ 0.09
SEMA3B-212ENST00000616701 LRRC8EQ6NSJ5 796 aa15.63■□□□□ 0.09
SEMA3B-212ENST00000616701 TMEM151AQ8N4L1 468 aa15.63■□□□□ 0.09
SEMA3B-212ENST00000616701 TMCO5AQ8N6Q1 288 aa15.63■□□□□ 0.09
SEMA3B-212ENST00000616701 FBXO27Q8NI29 283 aa15.63■□□□□ 0.09
SEMA3B-212ENST00000616701 PLD4Q96BZ4 506 aa15.63■□□□□ 0.09
SEMA3B-212ENST00000616701 RMDN1Q96DB5 314 aa15.63■□□□□ 0.09
SEMA3B-212ENST00000616701 PTCD3Q96EY7 689 aaKnown RBP15.63■□□□□ 0.09
SEMA3B-212ENST00000616701 PLK2Q9NYY3 685 aa15.63■□□□□ 0.09
SEMA3B-212ENST00000616701 TRIM13O60858 407 aa15.63■□□□□ 0.09
SEMA3B-212ENST00000616701 ESRRAP11474 423 aaPredicted RBP15.63■□□□□ 0.09
SEMA3B-212ENST00000616701 RAG1P15918 1043 aa15.63■□□□□ 0.09
SEMA3B-212ENST00000616701 MPSTP25325 297 aa15.63■□□□□ 0.09
SEMA3B-212ENST00000616701 NAGLUP54802 743 aa15.63■□□□□ 0.09
SEMA3B-212ENST00000616701 TPGS2Q68CL5 300 aa15.63■□□□□ 0.09
SEMA3B-212ENST00000616701 PIM3Q86V86 326 aa15.63■□□□□ 0.09
SEMA3B-212ENST00000616701 CCDC117Q8IWD4 279 aaPredicted RBP15.63■□□□□ 0.09
SEMA3B-212ENST00000616701 HS6ST3Q8IZP7 471 aa15.63■□□□□ 0.09
SEMA3B-212ENST00000616701 HEXDCQ8WVB3 486 aa15.63■□□□□ 0.09
SEMA3B-212ENST00000616701 SPO11Q9Y5K1 396 aa15.63■□□□□ 0.09
SEMA3B-212ENST00000616701 PRR5-ARHGAP8B1AHC4 643 aa15.63■□□□□ 0.09
SEMA3B-212ENST00000616701 CLDN11O75508 207 aa15.63■□□□□ 0.09
SEMA3B-212ENST00000616701 C1RP00736 705 aa15.63■□□□□ 0.09
SEMA3B-212ENST00000616701 BMP1P13497 986 aa15.63■□□□□ 0.09
SEMA3B-212ENST00000616701 GRK2P25098 689 aa15.63■□□□□ 0.09
SEMA3B-212ENST00000616701 ARHGAP8P85298 464 aa15.63■□□□□ 0.09
SEMA3B-212ENST00000616701 RAB33AQ14088 237 aa15.63■□□□□ 0.09
SEMA3B-212ENST00000616701 RPS27LQ71UM5 84 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms