RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 C17orf113A0A1B0GUU1 675 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 A0A1B0GVY2 172 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 C17orf102A2RUQ5 167 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 CLEC18AA5D8T8 446 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 NPIPB13A6NJU9 1138 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 NPIPB5A8MRT5 1133 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 NPIPB4C9JG80 1138 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 AP3D1O14617 1153 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 RNMTO43148 476 aaKnown RBP2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 SEPT4O43236 478 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 RGS14O43566 566 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 TSC22D2O75157 780 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 TPPPO94811 219 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 TMEM63AO94886 807 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 SLU7O95391 586 aaKnown RBP2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 TGDSO95455 350 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 GUCA1CO95843 209 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 SCGB1D1O95968 90 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 LCATP04180 440 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 UNGP13051 313 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 HLA-DPA1P20036 260 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 ACTN2P35609 894 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 AVPR1AP37288 418 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 PSMC4P43686 418 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 RPS6KA3P51812 740 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 LIMK1P53667 647 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 CRYZQ08257 329 aaKnown RBP2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 Q0VFX4 171 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 GALNT1Q10472 559 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 IFT88Q13099 833 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 CHAF1BQ13112 559 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 GPS2Q13227 327 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 KEAP1Q14145 624 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 PPP2R5BQ15173 497 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 SHBQ15464 509 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 TMEM266Q2M3C6 531 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 SETMARQ53H47 684 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 NCAPH2Q6IBW4 605 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 HEPHL1Q6MZM0 1159 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 TATDN1Q6P1N9 297 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 FAM47EQ6ZV65 393 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 RUFY3Q7L099 469 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 TRILQ7L0X0 811 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 CTU1Q7Z7A3 348 aaKnown RBP2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 PRPF39Q86UA1 669 aaKnown RBP2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 CUZD1Q86UP6 607 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 CCDC170Q8IYT3 715 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 TAGAPQ8N103 731 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 OR8H3Q8N146 312 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 TMEM217Q8N7C4 229 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 PRR26Q8N8Z3 221 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 LRRC57Q8N9N7 239 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 CLEC18CQ8NCF0 446 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 UTP15Q8TED0 518 aaKnown RBP2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 FAR1Q8WVX9 515 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 HTRA1Q92743 480 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 ARRDC3Q96B67 414 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 KIF1BPQ96EK5 621 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 CDCA5Q96FF9 252 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 MAELQ96JY0 434 aaKnown RBP2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 TEFMQ96QE5 360 aaKnown RBP2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 GPATCH1Q9BRR8 931 aaKnown RBP2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 HGH1Q9BTY7 390 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 DDX23Q9BUQ8 820 aaKnown RBP2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 HDHD5Q9BXW7 423 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 CADM1Q9BY67 442 aaKnown RBP2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 TM6SF1Q9BZW5 370 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 TRIM31Q9BZY9 425 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 TRPV4Q9HBA0 871 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 CCDC177Q9NQR7 707 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 INTS10Q9NVR2 710 aaKnown RBP2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 RBM28Q9NW13 759 aaKnown RBP2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 GGA3Q9NZ52 723 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 KIF17Q9P2E2 1029 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 IL36RNQ9UBH0 155 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 TBC1D29Q9UFV1 150 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 FBXO40Q9UH90 709 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 HOOK1Q9UJC3 728 aaKnown RBP2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 SH3BGRL2Q9UJC5 107 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 RPS6KA6Q9UK32 745 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 FBXL5Q9UKA1 691 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 OSGIN2Q9Y236 505 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 PCDHA10Q9Y5I2 948 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 SRPRBQ9Y5M8 271 aaKnown RBP2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 RAI2Q9Y5P3 530 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 SNX8Q9Y5X2 465 aa2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 TDRD9Q8NDG6 1382 aaKnown RBP2.73□□□□□ -1.97
HMGB1P24-202ENST00000615653 INAFM1C9JVW0 142 aa2.72□□□□□ -1.97
HMGB1P24-202ENST00000615653 H0YC42 278 aa2.72□□□□□ -1.97
HMGB1P24-202ENST00000615653 STMND1H3BQB6 276 aa2.72□□□□□ -1.97
HMGB1P24-202ENST00000615653 DDX39AO00148 427 aaKnown RBP2.72□□□□□ -1.97
HMGB1P24-202ENST00000615653 PLOD2O00469 737 aa2.72□□□□□ -1.97
HMGB1P24-202ENST00000615653 NOL3O60936 208 aaKnown RBP2.72□□□□□ -1.97
HMGB1P24-202ENST00000615653 GLUD1P00367 558 aa2.72□□□□□ -1.97
HMGB1P24-202ENST00000615653 SLC4A1P02730 911 aa2.72□□□□□ -1.97
HMGB1P24-202ENST00000615653 TFRCP02786 760 aaKnown RBP2.72□□□□□ -1.97
HMGB1P24-202ENST00000615653 ACADMP11310 421 aa2.72□□□□□ -1.97
HMGB1P24-202ENST00000615653 CKMT1AP12532 417 aa2.72□□□□□ -1.97
HMGB1P24-202ENST00000615653 CYP4B1P13584 511 aa2.72□□□□□ -1.97
HMGB1P24-202ENST00000615653 PLA2G2AP14555 144 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms