RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 IGFALSP35858 605 aa16.82■□□□□ 0.28
CBWD3-211ENST00000615061 CCT8P50990 548 aa16.82■□□□□ 0.28
CBWD3-211ENST00000615061 RWDD2BP57060 319 aa16.82■□□□□ 0.28
CBWD3-211ENST00000615061 POLR2LP62875 67 aaKnown RBP16.82■□□□□ 0.28
CBWD3-211ENST00000615061 OVGP1Q12889 678 aa16.82■□□□□ 0.28
CBWD3-211ENST00000615061 TXLNBQ8N3L3 684 aa16.82■□□□□ 0.28
CBWD3-211ENST00000615061 SPOCK2Q92563 424 aa16.82■□□□□ 0.28
CBWD3-211ENST00000615061 P3H4Q92791 437 aa16.82■□□□□ 0.28
CBWD3-211ENST00000615061 AGAP3Q96P47 875 aa16.82■□□□□ 0.28
CBWD3-211ENST00000615061 LENG8Q96PV6 779 aaPredicted RBP16.82■□□□□ 0.28
CBWD3-211ENST00000615061 AMACRQ9UHK6 382 aa16.82■□□□□ 0.28
CBWD3-211ENST00000615061 HS3ST3A1Q9Y663 406 aa16.82■□□□□ 0.28
CBWD3-211ENST00000615061 WDFY3Q8IZQ1 3526 aa16.82■□□□□ 0.28
CBWD3-211ENST00000615061 A6NNZ2 444 aa16.81■□□□□ 0.28
CBWD3-211ENST00000615061 FZD6O60353 706 aa16.81■□□□□ 0.28
CBWD3-211ENST00000615061 MMP2P08253 660 aa16.81■□□□□ 0.28
CBWD3-211ENST00000615061 CTPS1P17812 591 aa16.81■□□□□ 0.28
CBWD3-211ENST00000615061 CSRP1P21291 193 aaKnown RBP16.81■□□□□ 0.28
CBWD3-211ENST00000615061 NR2C2P49116 596 aa16.81■□□□□ 0.28
CBWD3-211ENST00000615061 BNIP3Q12983 259 aa16.81■□□□□ 0.28
CBWD3-211ENST00000615061 ZNF211Q13398 564 aaPredicted RBP16.81■□□□□ 0.28
CBWD3-211ENST00000615061 PRKD1Q15139 912 aaPredicted RBP16.81■□□□□ 0.28
CBWD3-211ENST00000615061 ARMC12Q5T9G4 340 aa16.81■□□□□ 0.28
CBWD3-211ENST00000615061 LIPIQ6XZB0 460 aa16.81■□□□□ 0.28
CBWD3-211ENST00000615061 KYAT3Q6YP21 454 aaKnown RBP16.81■□□□□ 0.28
CBWD3-211ENST00000615061 BBS12Q6ZW61 710 aa16.81■□□□□ 0.28
CBWD3-211ENST00000615061 DPPA4Q7L190 304 aa16.81■□□□□ 0.28
CBWD3-211ENST00000615061 ERMP1Q7Z2K6 904 aa16.81■□□□□ 0.28
CBWD3-211ENST00000615061 ZSCAN30Q86W11 494 aa16.81■□□□□ 0.28
CBWD3-211ENST00000615061 NAXDQ8IW45 347 aa16.81■□□□□ 0.28
CBWD3-211ENST00000615061 TP53I13Q8NBR0 393 aaPredicted RBP16.81■□□□□ 0.28
CBWD3-211ENST00000615061 PIH1D2Q8WWB5 315 aa16.81■□□□□ 0.28
CBWD3-211ENST00000615061 ASB12Q8WXK4 309 aa16.81■□□□□ 0.28
CBWD3-211ENST00000615061 FAM118BQ9BPY3 351 aa16.81■□□□□ 0.28
CBWD3-211ENST00000615061 OSBPL8Q9BZF1 889 aa16.81■□□□□ 0.28
CBWD3-211ENST00000615061 C10orf88Q9H8K7 445 aa16.81■□□□□ 0.28
CBWD3-211ENST00000615061 CHKBQ9Y259 395 aa16.81■□□□□ 0.28
CBWD3-211ENST00000615061 FPGTO14772 594 aa16.8■□□□□ 0.28
CBWD3-211ENST00000615061 DDX3YO15523 660 aaKnown RBP16.8■□□□□ 0.28
CBWD3-211ENST00000615061 ALPIP09923 528 aa16.8■□□□□ 0.28
CBWD3-211ENST00000615061 GM2AP17900 193 aa16.8■□□□□ 0.28
CBWD3-211ENST00000615061 CD86P42081 329 aa16.8■□□□□ 0.28
CBWD3-211ENST00000615061 COPS2P61201 443 aa16.8■□□□□ 0.28
CBWD3-211ENST00000615061 WSCD2Q2TBF2 565 aa16.8■□□□□ 0.28
CBWD3-211ENST00000615061 DBX2Q6ZNG2 339 aa16.8■□□□□ 0.28
CBWD3-211ENST00000615061 DENND6BQ8NEG7 585 aa16.8■□□□□ 0.28
CBWD3-211ENST00000615061 SETD7Q8WTS6 366 aaKnown RBP16.8■□□□□ 0.28
CBWD3-211ENST00000615061 TDRD1Q9BXT4 1180 aaKnown RBP16.8■□□□□ 0.28
CBWD3-211ENST00000615061 FRYQ5TBA9 3013 aa16.8■□□□□ 0.28
CBWD3-211ENST00000615061 SPAARA0A1B0GVQ0 90 aa16.79■□□□□ 0.28
CBWD3-211ENST00000615061 NPIPB15A6NHN6 443 aaPredicted RBP16.79■□□□□ 0.28
CBWD3-211ENST00000615061 LZTS3O60299 673 aaPredicted RBP16.79■□□□□ 0.28
CBWD3-211ENST00000615061 MAGEC1O60732 1142 aa16.79■□□□□ 0.28
CBWD3-211ENST00000615061 SDC3O75056 442 aa16.79■□□□□ 0.28
CBWD3-211ENST00000615061 PRLP01236 227 aa16.79■□□□□ 0.28
CBWD3-211ENST00000615061 ELFN1P0C7U0 828 aa16.79■□□□□ 0.28
CBWD3-211ENST00000615061 LHCGRP22888 699 aa16.79■□□□□ 0.28
CBWD3-211ENST00000615061 PTPN3P26045 913 aa16.79■□□□□ 0.28
CBWD3-211ENST00000615061 IRF4Q15306 451 aa16.79■□□□□ 0.28
CBWD3-211ENST00000615061 ZNF542PQ5EBM4 170 aa16.79■□□□□ 0.28
CBWD3-211ENST00000615061 BZW1Q7L1Q6 419 aaKnown RBP16.79■□□□□ 0.28
CBWD3-211ENST00000615061 TSPAN33Q86UF1 283 aa16.79■□□□□ 0.28
CBWD3-211ENST00000615061 SYCE1Q8N0S2 351 aa16.79■□□□□ 0.28
CBWD3-211ENST00000615061 RNF10Q8N5U6 811 aaKnown RBP16.79■□□□□ 0.28
CBWD3-211ENST00000615061 TFB1MQ8WVM0 346 aaKnown RBP16.79■□□□□ 0.28
CBWD3-211ENST00000615061 ERVMER34-1Q9H9K5 563 aa16.79■□□□□ 0.28
CBWD3-211ENST00000615061 LZTFL1Q9NQ48 299 aa16.79■□□□□ 0.28
CBWD3-211ENST00000615061 GPR27Q9NS67 375 aa16.79■□□□□ 0.28
CBWD3-211ENST00000615061 PHTF1Q9UMS5 762 aa16.79■□□□□ 0.28
CBWD3-211ENST00000615061 AKAP13Q12802 2813 aa16.79■□□□□ 0.28
CBWD3-211ENST00000615061 APOC4-APOC2K7ER74 178 aa16.79■□□□□ 0.28
CBWD3-211ENST00000615061 KRT86O43790 486 aa16.79■□□□□ 0.28
CBWD3-211ENST00000615061 PCDHGA12O60330 932 aa16.79■□□□□ 0.28
CBWD3-211ENST00000615061 CBFA2T3O75081 653 aa16.79■□□□□ 0.28
CBWD3-211ENST00000615061 RECQL5O94762 991 aaPredicted RBP16.79■□□□□ 0.28
CBWD3-211ENST00000615061 APOC2P02655 101 aa16.79■□□□□ 0.28
CBWD3-211ENST00000615061 CEACAM1P13688 526 aa16.79■□□□□ 0.28
CBWD3-211ENST00000615061 EPHA8P29322 1005 aaPredicted RBP16.79■□□□□ 0.28
CBWD3-211ENST00000615061 PFN3P60673 137 aa16.79■□□□□ 0.28
CBWD3-211ENST00000615061 SKOR1P84550 965 aa16.79■□□□□ 0.28
CBWD3-211ENST00000615061 WASHC5Q12768 1159 aa16.79■□□□□ 0.28
CBWD3-211ENST00000615061 PDE1CQ14123 709 aaPredicted RBP16.79■□□□□ 0.28
CBWD3-211ENST00000615061 CNGA3Q16281 694 aa16.79■□□□□ 0.28
CBWD3-211ENST00000615061 TEX44Q53QW1 395 aa16.79■□□□□ 0.28
CBWD3-211ENST00000615061 DENND2CQ68D51 928 aa16.79■□□□□ 0.28
CBWD3-211ENST00000615061 SAP25Q8TEE9 199 aa16.79■□□□□ 0.28
CBWD3-211ENST00000615061 RBM15Q96T37 977 aaKnown RBP eCLIP16.79■□□□□ 0.28
CBWD3-211ENST00000615061 TSGA10Q9BZW7 698 aa16.79■□□□□ 0.28
CBWD3-211ENST00000615061 BRD8Q9H0E9 1235 aa16.79■□□□□ 0.28
CBWD3-211ENST00000615061 SLC32A1Q9H598 525 aa16.79■□□□□ 0.28
CBWD3-211ENST00000615061 PCOLCE2Q9UKZ9 415 aa16.79■□□□□ 0.28
CBWD3-211ENST00000615061 ACACBO00763 2458 aa16.78■□□□□ 0.28
CBWD3-211ENST00000615061 DFNA5O60443 496 aa16.78■□□□□ 0.28
CBWD3-211ENST00000615061 CCDC175P0C221 793 aa16.78■□□□□ 0.28
CBWD3-211ENST00000615061 CES1P23141 567 aa16.78■□□□□ 0.28
CBWD3-211ENST00000615061 ARRB1P49407 418 aaPredicted RBP16.78■□□□□ 0.28
CBWD3-211ENST00000615061 OTUD4Q01804 1114 aaKnown RBP16.78■□□□□ 0.28
CBWD3-211ENST00000615061 FZD2Q14332 565 aa16.78■□□□□ 0.28
CBWD3-211ENST00000615061 LRRC14Q15048 493 aa16.78■□□□□ 0.28
CBWD3-211ENST00000615061 NOMO1Q15155 1222 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms