RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 FAM124BQ9H5Z6 455 aaPredicted RBP8.8□□□□□ -1
TTC28-208ENST00000612946 FAM217BQ9NTX9 383 aaPredicted RBP8.8□□□□□ -1
TTC28-208ENST00000612946 ARL8BQ9NVJ2 186 aa8.8□□□□□ -1
TTC28-208ENST00000612946 VPS51Q9UID3 782 aa8.8□□□□□ -1
TTC28-208ENST00000612946 CCNT2O60583 730 aaKnown RBP8.8□□□□□ -1
TTC28-208ENST00000612946 PSKH1P11801 424 aa8.8□□□□□ -1
TTC28-208ENST00000612946 IMPDH1P20839 514 aa8.8□□□□□ -1
TTC28-208ENST00000612946 MTHFRP42898 656 aa8.8□□□□□ -1
TTC28-208ENST00000612946 MED22Q15528 200 aa8.8□□□□□ -1
TTC28-208ENST00000612946 GPRC6AQ5T6X5 926 aa8.8□□□□□ -1
TTC28-208ENST00000612946 ZNF548Q8NEK5 533 aaPredicted RBP8.8□□□□□ -1
TTC28-208ENST00000612946 HTR3CQ8WXA8 447 aa8.8□□□□□ -1
TTC28-208ENST00000612946 HNRNPABQ99729 332 aaKnown RBP8.8□□□□□ -1
TTC28-208ENST00000612946 EIF3KQ9UBQ5 218 aaKnown RBP8.8□□□□□ -1
TTC28-208ENST00000612946 USP17L3A6NCW0 530 aa8.8□□□□□ -1
TTC28-208ENST00000612946 USP17L4A6NCW7 530 aa8.8□□□□□ -1
TTC28-208ENST00000612946 GRIA4P48058 902 aa8.8□□□□□ -1
TTC28-208ENST00000612946 SSTP61278 116 aa8.8□□□□□ -1
TTC28-208ENST00000612946 USP17L1Q7RTZ2 530 aa8.8□□□□□ -1
TTC28-208ENST00000612946 MRPS14O60783 128 aaKnown RBP8.8□□□□□ -1
TTC28-208ENST00000612946 SLC7A2P52569 658 aa8.8□□□□□ -1
TTC28-208ENST00000612946 RGS1Q08116 209 aa8.8□□□□□ -1
TTC28-208ENST00000612946 XKR3Q5GH77 459 aa8.8□□□□□ -1
TTC28-208ENST00000612946 ANXA8L1Q5VT79 327 aa8.8□□□□□ -1
TTC28-208ENST00000612946 UFD1Q92890 307 aa8.8□□□□□ -1
TTC28-208ENST00000612946 CLCC1Q96S66 551 aa8.8□□□□□ -1
TTC28-208ENST00000612946 DCP1AQ9NPI6 582 aaPredicted RBP8.8□□□□□ -1
TTC28-208ENST00000612946 REXO2Q9Y3B8 237 aaKnown RBP8.8□□□□□ -1
TTC28-208ENST00000612946 ARID1AO14497 2285 aa8.8□□□□□ -1
TTC28-208ENST00000612946 RAB19A4D1S5 217 aa8.8□□□□□ -1
TTC28-208ENST00000612946 DENRO43583 198 aaKnown RBP8.8□□□□□ -1
TTC28-208ENST00000612946 SSX5O60225 188 aa8.8□□□□□ -1
TTC28-208ENST00000612946 RPS2P15880 293 aaKnown RBP8.8□□□□□ -1
TTC28-208ENST00000612946 CYP2A7P20853 494 aa8.8□□□□□ -1
TTC28-208ENST00000612946 CCNFP41002 786 aa8.8□□□□□ -1
TTC28-208ENST00000612946 MAGEA12P43365 314 aa8.8□□□□□ -1
TTC28-208ENST00000612946 CBX5P45973 191 aa8.8□□□□□ -1
TTC28-208ENST00000612946 SGO1Q5FBB7 561 aa8.8□□□□□ -1
TTC28-208ENST00000612946 FASTKD5Q7L8L6 764 aaKnown RBP8.8□□□□□ -1
TTC28-208ENST00000612946 LAPTM4BQ86VI4 370 aa8.8□□□□□ -1
TTC28-208ENST00000612946 FAXDC2Q96IV6 333 aa8.8□□□□□ -1
TTC28-208ENST00000612946 TRIT1Q9H3H1 467 aaKnown RBP8.8□□□□□ -1
TTC28-208ENST00000612946 AFF4Q9UHB7 1163 aaKnown RBP8.8□□□□□ -1
TTC28-208ENST00000612946 TBC1D24Q9ULP9 559 aa8.8□□□□□ -1
TTC28-208ENST00000612946 CTDNEP1O95476 244 aa8.79□□□□□ -1
TTC28-208ENST00000612946 SHBGP04278 402 aa8.79□□□□□ -1
TTC28-208ENST00000612946 MNDAP41218 407 aa8.79□□□□□ -1
TTC28-208ENST00000612946 KCNA10Q16322 511 aa8.79□□□□□ -1
TTC28-208ENST00000612946 FGD3Q5JSP0 725 aa8.79□□□□□ -1
TTC28-208ENST00000612946 IQSEC1Q6DN90 963 aa8.79□□□□□ -1
TTC28-208ENST00000612946 PTCHD4Q6ZW05 846 aa8.79□□□□□ -1
TTC28-208ENST00000612946 METTL25Q8N6Q8 603 aa8.79□□□□□ -1
TTC28-208ENST00000612946 AP2M1Q96CW1 435 aa8.79□□□□□ -1
TTC28-208ENST00000612946 AP5M1Q9H0R1 490 aa8.79□□□□□ -1
TTC28-208ENST00000612946 FBXO6Q9NRD1 293 aaPredicted RBP8.79□□□□□ -1
TTC28-208ENST00000612946 PRMT7Q9NVM4 692 aaPredicted RBP8.79□□□□□ -1
TTC28-208ENST00000612946 CSDE1O75534 798 aaKnown RBP8.79□□□□□ -1
TTC28-208ENST00000612946 KRT33AO76009 404 aa8.79□□□□□ -1
TTC28-208ENST00000612946 CD40LGP29965 261 aa8.79□□□□□ -1
TTC28-208ENST00000612946 AGTR1P30556 359 aa8.79□□□□□ -1
TTC28-208ENST00000612946 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.79□□□□□ -1
TTC28-208ENST00000612946 ZFP28Q8NHY6 868 aa8.79□□□□□ -1
TTC28-208ENST00000612946 JPH3Q8WXH2 748 aaPredicted RBP8.79□□□□□ -1
TTC28-208ENST00000612946 RCN3Q96D15 328 aa8.79□□□□□ -1
TTC28-208ENST00000612946 GPR63Q9BZJ6 419 aa8.79□□□□□ -1
TTC28-208ENST00000612946 NMUR2Q9GZQ4 415 aa8.79□□□□□ -1
TTC28-208ENST00000612946 CST11Q9H112 138 aa8.79□□□□□ -1
TTC28-208ENST00000612946 CDH1P12830 882 aa8.79□□□□□ -1
TTC28-208ENST00000612946 FGL1Q08830 312 aa8.79□□□□□ -1
TTC28-208ENST00000612946 FOXD4Q12950 439 aaPredicted RBP8.79□□□□□ -1
TTC28-208ENST00000612946 NUDT18Q6ZVK8 323 aa8.79□□□□□ -1
TTC28-208ENST00000612946 ANKRD13BQ86YJ7 626 aa8.79□□□□□ -1
TTC28-208ENST00000612946 OR52K2Q8NGK3 314 aa8.79□□□□□ -1
TTC28-208ENST00000612946 ETNK2Q9NVF9 386 aa8.79□□□□□ -1
TTC28-208ENST00000612946 MALT1Q9UDY8 824 aa8.79□□□□□ -1
TTC28-208ENST00000612946 FABP12A6NFH5 140 aa8.79□□□□□ -1
TTC28-208ENST00000612946 PEX11AO75192 247 aa8.79□□□□□ -1
TTC28-208ENST00000612946 IFI30P13284 250 aa8.79□□□□□ -1
TTC28-208ENST00000612946 CHRM3P20309 590 aa8.79□□□□□ -1
TTC28-208ENST00000612946 EMC10Q5UCC4 262 aa8.79□□□□□ -1
TTC28-208ENST00000612946 CMTR2Q8IYT2 770 aaKnown RBP8.79□□□□□ -1
TTC28-208ENST00000612946 MARVELD2Q8N4S9 558 aa8.79□□□□□ -1
TTC28-208ENST00000612946 CADM1Q9BY67 442 aaKnown RBP8.79□□□□□ -1
TTC28-208ENST00000612946 ACE2Q9BYF1 805 aaPredicted RBP8.79□□□□□ -1
TTC28-208ENST00000612946 POMKQ9H5K3 350 aa8.79□□□□□ -1
TTC28-208ENST00000612946 IL1RAPQ9NPH3 570 aa8.79□□□□□ -1
TTC28-208ENST00000612946 BIN3Q9NQY0 253 aa8.79□□□□□ -1
TTC28-208ENST00000612946 PCDHB16Q9NRJ7 776 aa8.79□□□□□ -1
TTC28-208ENST00000612946 SLC39A1Q9NY26 324 aa8.79□□□□□ -1
TTC28-208ENST00000612946 CPNE3O75131 537 aaKnown RBP8.79□□□□□ -1
TTC28-208ENST00000612946 RPN2P04844 631 aa8.79□□□□□ -1
TTC28-208ENST00000612946 SLC2A4P14672 509 aa8.79□□□□□ -1
TTC28-208ENST00000612946 MERTKQ12866 999 aa8.79□□□□□ -1
TTC28-208ENST00000612946 SYT16Q17RD7 645 aa8.79□□□□□ -1
TTC28-208ENST00000612946 SALL1Q9NSC2 1324 aa8.79□□□□□ -1
TTC28-208ENST00000612946 A0A0A0MRY4 1105 aa8.79□□□□□ -1
TTC28-208ENST00000612946 A0A1B0GVI7 797 aa8.79□□□□□ -1
TTC28-208ENST00000612946 LCP1P13796 627 aa8.79□□□□□ -1
TTC28-208ENST00000612946 TCP10Q12799 353 aa8.79□□□□□ -1
TTC28-208ENST00000612946 ANKRD52Q8NB46 1076 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms