RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 TRIM54Q9BYV2 358 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 HCFC1R1Q9NWW0 138 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 BCAP29Q9UHQ4 241 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 PCDHB8Q9UN66 801 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 AP4B1Q9Y6B7 739 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 TNS1Q9HBL0 1735 aaKnown RBP10.91□□□□□ -0.66
FAM3A-221ENST00000612856 SDR42E2A6NKP2 422 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 MFSD11O43934 449 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 SNAP91O60641 907 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 RNASEH2AO75792 299 aaKnown RBP10.91□□□□□ -0.66
FAM3A-221ENST00000612856 UNGP13051 313 aaPredicted RBP10.91□□□□□ -0.66
FAM3A-221ENST00000612856 PTPN2P17706 415 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 PSMC3P17980 439 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 TSPAN8P19075 237 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 TIE1P35590 1138 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 SERPINB5P36952 375 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 HNF4AP41235 474 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 ENTPD1P49961 510 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 NUDT2P50583 147 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 PKNOX1P55347 436 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 STX1BP61266 288 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 TMEM53Q6P2H8 277 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 NAPRTQ6XQN6 538 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 NET1Q7Z628 596 aaPredicted RBP10.91□□□□□ -0.66
FAM3A-221ENST00000612856 ZNF598Q86UK7 904 aaKnown RBP10.91□□□□□ -0.66
FAM3A-221ENST00000612856 SYT11Q9BT88 431 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 PIGVQ9NUD9 493 aa10.91□□□□□ -0.66
FAM3A-221ENST00000612856 DUS2Q9NX74 493 aaKnown RBP10.91□□□□□ -0.66
FAM3A-221ENST00000612856 GOLGA8QA0A0J9YX86 632 aa10.9□□□□□ -0.66
FAM3A-221ENST00000612856 GOLGA8OA6NCC3 632 aa10.9□□□□□ -0.66
FAM3A-221ENST00000612856 E9PBE3 544 aa10.9□□□□□ -0.66
FAM3A-221ENST00000612856 GOLGA8NF8WBI6 632 aa10.9□□□□□ -0.66
FAM3A-221ENST00000612856 KLHL41O60662 606 aa10.9□□□□□ -0.66
FAM3A-221ENST00000612856 TNFAIP8O95379 198 aa10.9□□□□□ -0.66
FAM3A-221ENST00000612856 PENKP01210 267 aaPredicted RBP10.9□□□□□ -0.66
FAM3A-221ENST00000612856 C21orf59P57076 290 aa10.9□□□□□ -0.66
FAM3A-221ENST00000612856 FAAP100Q0VG06 881 aa10.9□□□□□ -0.66
FAM3A-221ENST00000612856 CTBP1Q13363 440 aa10.9□□□□□ -0.66
FAM3A-221ENST00000612856 CCNG2Q16589 344 aa10.9□□□□□ -0.66
FAM3A-221ENST00000612856 CLLU1OSQ5K130 101 aa10.9□□□□□ -0.66
FAM3A-221ENST00000612856 C6orf10Q5SRN2 563 aa10.9□□□□□ -0.66
FAM3A-221ENST00000612856 PSMG2Q969U7 264 aa10.9□□□□□ -0.66
FAM3A-221ENST00000612856 P2RY11Q96G91 374 aa10.9□□□□□ -0.66
FAM3A-221ENST00000612856 CSPG4P5Q96PW8 444 aa10.9□□□□□ -0.66
FAM3A-221ENST00000612856 HNRNPABQ99729 332 aaKnown RBP10.9□□□□□ -0.66
FAM3A-221ENST00000612856 TSEN34Q9BSV6 310 aaKnown RBP10.9□□□□□ -0.66
FAM3A-221ENST00000612856 CLPBQ9H078 707 aa10.9□□□□□ -0.66
FAM3A-221ENST00000612856 ZFP14Q9HCL3 533 aa10.9□□□□□ -0.66
FAM3A-221ENST00000612856 S100A14Q9HCY8 104 aa10.9□□□□□ -0.66
FAM3A-221ENST00000612856 AVENQ9NQS1 362 aaPredicted RBP10.9□□□□□ -0.66
FAM3A-221ENST00000612856 GRID1Q9ULK0 1009 aa10.9□□□□□ -0.66
FAM3A-221ENST00000612856 MYO18AQ92614 2054 aaKnown RBP10.9□□□□□ -0.66
FAM3A-221ENST00000612856 HLA-EP13747 358 aa10.9□□□□□ -0.66
FAM3A-221ENST00000612856 MZF1P28698 734 aaPredicted RBP10.9□□□□□ -0.66
FAM3A-221ENST00000612856 GKP32189 559 aa10.9□□□□□ -0.66
FAM3A-221ENST00000612856 CHRNA4P43681 627 aa10.9□□□□□ -0.66
FAM3A-221ENST00000612856 THOP1P52888 689 aa10.9□□□□□ -0.66
FAM3A-221ENST00000612856 GHRHRQ02643 423 aa10.9□□□□□ -0.66
FAM3A-221ENST00000612856 BST1Q10588 318 aa10.9□□□□□ -0.66
FAM3A-221ENST00000612856 OLIG2Q13516 323 aa10.9□□□□□ -0.66
FAM3A-221ENST00000612856 PERM1Q5SV97 790 aa10.9□□□□□ -0.66
FAM3A-221ENST00000612856 LAYNQ6UX15 382 aa10.9□□□□□ -0.66
FAM3A-221ENST00000612856 TMEM173Q86WV6 379 aaPredicted RBP10.9□□□□□ -0.66
FAM3A-221ENST00000612856 PHF13Q86YI8 300 aaPredicted RBP10.9□□□□□ -0.66
FAM3A-221ENST00000612856 ZNF510Q9Y2H8 683 aa10.9□□□□□ -0.66
FAM3A-221ENST00000612856 HBS1LQ9Y450 684 aaKnown RBP10.9□□□□□ -0.66
FAM3A-221ENST00000612856 KIAA1217Q5T5P2 1943 aa10.9□□□□□ -0.67
FAM3A-221ENST00000612856 TM7SF2O76062 418 aa10.9□□□□□ -0.67
FAM3A-221ENST00000612856 CNPP09543 421 aaKnown RBP10.9□□□□□ -0.67
FAM3A-221ENST00000612856 RALBP11234 206 aa10.9□□□□□ -0.67
FAM3A-221ENST00000612856 FMO4P31512 558 aa10.9□□□□□ -0.67
FAM3A-221ENST00000612856 RPL22P35268 128 aaKnown RBP10.9□□□□□ -0.67
FAM3A-221ENST00000612856 HEATR4Q86WZ0 1026 aa10.9□□□□□ -0.67
FAM3A-221ENST00000612856 IFNLR1Q8IU57 520 aaPredicted RBP10.9□□□□□ -0.67
FAM3A-221ENST00000612856 GLIS1Q8NBF1 620 aa10.9□□□□□ -0.67
FAM3A-221ENST00000612856 ZFP28Q8NHY6 868 aa10.9□□□□□ -0.67
FAM3A-221ENST00000612856 ZNF461Q8TAF7 563 aa10.9□□□□□ -0.67
FAM3A-221ENST00000612856 KXD1Q9BQD3 176 aa10.9□□□□□ -0.67
FAM3A-221ENST00000612856 SEPT3Q9UH03 358 aa10.9□□□□□ -0.67
FAM3A-221ENST00000612856 RPL26L1Q9UNX3 145 aaKnown RBP10.9□□□□□ -0.67
FAM3A-221ENST00000612856 RNF103-CHMP3A0A140T963 221 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 MTMR11A4FU01 709 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 APOC4-APOC2K7ER74 178 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 ZNF197O14709 1029 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 ADAM12O43184 909 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 MTSS1O43312 755 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 DCXO43602 365 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 KATNA1O75449 491 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 SORBS2O94875 1100 aaKnown RBP10.89□□□□□ -0.67
FAM3A-221ENST00000612856 APOC2P02655 101 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 PABPC4LP0CB38 370 aaKnown RBP10.89□□□□□ -0.67
FAM3A-221ENST00000612856 EPCAMP16422 314 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 PXNP49023 591 aaPredicted RBP10.89□□□□□ -0.67
FAM3A-221ENST00000612856 IRF5Q13568 498 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 CERCAMQ5T4B2 595 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 TMEM214Q6NUQ4 689 aaKnown RBP10.89□□□□□ -0.67
FAM3A-221ENST00000612856 MON1BQ7L1V2 547 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 GPRIN1Q7Z2K8 1008 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 LRRTM3Q86VH5 581 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 ZDHHC17Q8IUH5 632 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms