RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 PCSK4Q6UW60 755 aa17.88■□□□□ 0.45
SSBP1-215ENST00000612337 RD3Q7Z3Z2 195 aa17.88■□□□□ 0.45
SSBP1-215ENST00000612337 PSTKQ8IV42 348 aaKnown RBP17.88■□□□□ 0.45
SSBP1-215ENST00000612337 ARL14Q8N4G2 192 aa17.88■□□□□ 0.45
SSBP1-215ENST00000612337 CCDC97Q96F63 343 aaPredicted RBP17.88■□□□□ 0.45
SSBP1-215ENST00000612337 CINPQ9BW66 212 aaPredicted RBP17.88■□□□□ 0.45
SSBP1-215ENST00000612337 SP110Q9HB58 689 aa17.88■□□□□ 0.45
SSBP1-215ENST00000612337 CPNE5Q9HCH3 593 aa17.88■□□□□ 0.45
SSBP1-215ENST00000612337 RTN4Q9NQC3 1192 aaKnown RBP17.88■□□□□ 0.45
SSBP1-215ENST00000612337 SIRPGQ9P1W8 387 aa17.88■□□□□ 0.45
SSBP1-215ENST00000612337 GPR34Q9UPC5 381 aa17.88■□□□□ 0.45
SSBP1-215ENST00000612337 SSUH2Q9Y2M2 353 aa17.88■□□□□ 0.45
SSBP1-215ENST00000612337 DGKBQ9Y6T7 804 aa17.88■□□□□ 0.45
SSBP1-215ENST00000612337 CCDC187A0A096LP49 1063 aa17.87■□□□□ 0.45
SSBP1-215ENST00000612337 LRRC53A6NM62 1247 aa17.87■□□□□ 0.45
SSBP1-215ENST00000612337 CDRT15L2A8MXV6 281 aa17.87■□□□□ 0.45
SSBP1-215ENST00000612337 ERVH48-1M5A8F1 160 aa17.87■□□□□ 0.45
SSBP1-215ENST00000612337 DFFAO00273 331 aa17.87■□□□□ 0.45
SSBP1-215ENST00000612337 PRPSAP2O60256 369 aa17.87■□□□□ 0.45
SSBP1-215ENST00000612337 RNF8O76064 485 aa17.87■□□□□ 0.45
SSBP1-215ENST00000612337 TNFP01375 233 aa17.87■□□□□ 0.45
SSBP1-215ENST00000612337 GZMAP12544 262 aa17.87■□□□□ 0.45
SSBP1-215ENST00000612337 MIPP30301 263 aa17.87■□□□□ 0.45
SSBP1-215ENST00000612337 HCAR3P49019 387 aa17.87■□□□□ 0.45
SSBP1-215ENST00000612337 KIAA1024LP59773 190 aa17.87■□□□□ 0.45
SSBP1-215ENST00000612337 RHDQ02161 417 aa17.87■□□□□ 0.45
SSBP1-215ENST00000612337 BCL2L1Q07817 233 aa17.87■□□□□ 0.45
SSBP1-215ENST00000612337 IL10RBQ08334 325 aa17.87■□□□□ 0.45
SSBP1-215ENST00000612337 RALGDSQ12967 914 aa17.87■□□□□ 0.45
SSBP1-215ENST00000612337 TCEA2Q15560 299 aa17.87■□□□□ 0.45
SSBP1-215ENST00000612337 PPP6R3Q5H9R7 873 aaPredicted RBP17.87■□□□□ 0.45
SSBP1-215ENST00000612337 ARHGAP40Q5TG30 622 aa17.87■□□□□ 0.45
SSBP1-215ENST00000612337 ARHGAP36Q6ZRI8 547 aa17.87■□□□□ 0.45
SSBP1-215ENST00000612337 NYAP1Q6ZVC0 841 aa17.87■□□□□ 0.45
SSBP1-215ENST00000612337 CYP4V2Q6ZWL3 525 aaPredicted RBP17.87■□□□□ 0.45
SSBP1-215ENST00000612337 NPWQ8N729 165 aa17.87■□□□□ 0.45
SSBP1-215ENST00000612337 PLA2G15Q8NCC3 412 aa17.87■□□□□ 0.45
SSBP1-215ENST00000612337 OR6C4Q8NGE1 309 aa17.87■□□□□ 0.45
SSBP1-215ENST00000612337 CCDC74AQ96AQ1 378 aa17.87■□□□□ 0.45
SSBP1-215ENST00000612337 PDXPQ96GD0 296 aa17.87■□□□□ 0.45
SSBP1-215ENST00000612337 LIN37Q96GY3 246 aaPredicted RBP17.87■□□□□ 0.45
SSBP1-215ENST00000612337 RBM15Q96T37 977 aaKnown RBP eCLIP17.87■□□□□ 0.45
SSBP1-215ENST00000612337 SYNDIG1Q9H7V2 258 aa17.87■□□□□ 0.45
SSBP1-215ENST00000612337 RABGEF1Q9UJ41 708 aa17.87■□□□□ 0.45
SSBP1-215ENST00000612337 PMS2P1A4D2B8 440 aa17.86■□□□□ 0.45
SSBP1-215ENST00000612337 CACNB4O00305 520 aaPredicted RBP17.86■□□□□ 0.45
SSBP1-215ENST00000612337 TRAFD1O14545 582 aaPredicted RBP17.86■□□□□ 0.45
SSBP1-215ENST00000612337 RECQL5O94762 991 aaPredicted RBP17.86■□□□□ 0.45
SSBP1-215ENST00000612337 HOXC4P09017 264 aaPredicted RBP17.86■□□□□ 0.45
SSBP1-215ENST00000612337 ELFN1P0C7U0 828 aa17.86■□□□□ 0.45
SSBP1-215ENST00000612337 POLR2LP62875 67 aaKnown RBP17.86■□□□□ 0.45
SSBP1-215ENST00000612337 TYRO3Q06418 890 aa17.86■□□□□ 0.45
SSBP1-215ENST00000612337 ASIC2Q16515 512 aa17.86■□□□□ 0.45
SSBP1-215ENST00000612337 FOXR1Q6PIV2 292 aa17.86■□□□□ 0.45
SSBP1-215ENST00000612337 LIPIQ6XZB0 460 aa17.86■□□□□ 0.45
SSBP1-215ENST00000612337 DPPA4Q7L190 304 aa17.86■□□□□ 0.45
SSBP1-215ENST00000612337 ZNF571Q7Z3V5 609 aaPredicted RBP17.86■□□□□ 0.45
SSBP1-215ENST00000612337 CLEC14AQ86T13 490 aa17.86■□□□□ 0.45
SSBP1-215ENST00000612337 SNRNP27Q8WVK2 155 aaKnown RBP17.86■□□□□ 0.45
SSBP1-215ENST00000612337 FUBP1Q96AE4 644 aaKnown RBP17.86■□□□□ 0.45
SSBP1-215ENST00000612337 WBP1Q96G27 269 aa17.86■□□□□ 0.45
SSBP1-215ENST00000612337 TRIM7Q9C029 511 aa17.86■□□□□ 0.45
SSBP1-215ENST00000612337 NAT10Q9H0A0 1025 aaKnown RBP17.86■□□□□ 0.45
SSBP1-215ENST00000612337 HAUS4Q9H6D7 363 aa17.86■□□□□ 0.45
SSBP1-215ENST00000612337 AIPL1Q9NZN9 384 aa17.86■□□□□ 0.45
SSBP1-215ENST00000612337 D6RAR5 112 aa17.85■□□□□ 0.45
SSBP1-215ENST00000612337 LRCH4O75427 683 aa17.85■□□□□ 0.45
SSBP1-215ENST00000612337 TNFSF15O95150 251 aa17.85■□□□□ 0.45
SSBP1-215ENST00000612337 MBD3O95983 291 aa17.85■□□□□ 0.45
SSBP1-215ENST00000612337 FTLP02792 175 aaPredicted RBP17.85■□□□□ 0.45
SSBP1-215ENST00000612337 ITGA2BP08514 1039 aa17.85■□□□□ 0.45
SSBP1-215ENST00000612337 PRKCIP41743 596 aa17.85■□□□□ 0.45
SSBP1-215ENST00000612337 SCNN1BP51168 640 aa17.85■□□□□ 0.45
SSBP1-215ENST00000612337 RENBPP51606 427 aa17.85■□□□□ 0.45
SSBP1-215ENST00000612337 AP1S1P61966 158 aa17.85■□□□□ 0.45
SSBP1-215ENST00000612337 DPYSQ14117 519 aa17.85■□□□□ 0.45
SSBP1-215ENST00000612337 KCTD16Q68DU8 428 aa17.85■□□□□ 0.45
SSBP1-215ENST00000612337 ZNF843Q8N446 348 aa17.85■□□□□ 0.45
SSBP1-215ENST00000612337 LZTR1Q8N653 840 aa17.85■□□□□ 0.45
SSBP1-215ENST00000612337 PAF1Q8N7H5 531 aa17.85■□□□□ 0.45
SSBP1-215ENST00000612337 GPR156Q8NFN8 814 aa17.85■□□□□ 0.45
SSBP1-215ENST00000612337 OR56A4Q8NGH8 313 aa17.85■□□□□ 0.45
SSBP1-215ENST00000612337 OR1E3Q8WZA6 343 aa17.85■□□□□ 0.45
SSBP1-215ENST00000612337 ZNF599Q96NL3 588 aa17.85■□□□□ 0.45
SSBP1-215ENST00000612337 PSKH2Q96QS6 385 aa17.85■□□□□ 0.45
SSBP1-215ENST00000612337 GFM1Q96RP9 751 aaKnown RBP17.85■□□□□ 0.45
SSBP1-215ENST00000612337 BPIFA3Q9BQP9 254 aa17.85■□□□□ 0.45
SSBP1-215ENST00000612337 CWC15Q9P013 229 aaKnown RBP17.85■□□□□ 0.45
SSBP1-215ENST00000612337 CNOT8Q9UFF9 292 aaKnown RBP17.85■□□□□ 0.45
SSBP1-215ENST00000612337 SEPT3Q9UH03 358 aa17.85■□□□□ 0.45
SSBP1-215ENST00000612337 SCINQ9Y6U3 715 aa17.85■□□□□ 0.45
SSBP1-215ENST00000612337 COL6A6A6NMZ7 2263 aa17.84■□□□□ 0.45
SSBP1-215ENST00000612337 UNC13CQ8NB66 2214 aa17.84■□□□□ 0.45
SSBP1-215ENST00000612337 A0A1W2PQM1 296 aa17.84■□□□□ 0.45
SSBP1-215ENST00000612337 TMEM202A6NGA9 273 aa17.84■□□□□ 0.45
SSBP1-215ENST00000612337 TMX2-CTNND1H3BSU7 103 aa17.84■□□□□ 0.45
SSBP1-215ENST00000612337 TNFRSF10CO14798 259 aa17.84■□□□□ 0.45
SSBP1-215ENST00000612337 RPLP0P05388 317 aaKnown RBP17.84■□□□□ 0.45
SSBP1-215ENST00000612337 GM2AP17900 193 aa17.84■□□□□ 0.45
SSBP1-215ENST00000612337 KELP23276 732 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms