RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 FSTL4Q6MZW2 842 aa12.36□□□□□ -0.43
CBWD1-220ENST00000612045 EP400NLQ6ZTU2 488 aa12.36□□□□□ -0.43
CBWD1-220ENST00000612045 C2CD4AQ8NCU7 369 aaPredicted RBP12.36□□□□□ -0.43
CBWD1-220ENST00000612045 OR6P1Q8NGX9 317 aa12.36□□□□□ -0.43
CBWD1-220ENST00000612045 WFIKKN2Q8TEU8 576 aa12.36□□□□□ -0.43
CBWD1-220ENST00000612045 CYB5D2Q8WUJ1 264 aa12.36□□□□□ -0.43
CBWD1-220ENST00000612045 DYDC1Q8WWB3 177 aa12.36□□□□□ -0.43
CBWD1-220ENST00000612045 PIH1D2Q8WWB5 315 aa12.36□□□□□ -0.43
CBWD1-220ENST00000612045 VOPP1Q96AW1 172 aa12.36□□□□□ -0.43
CBWD1-220ENST00000612045 ATXN7L3BQ96GX2 97 aa12.36□□□□□ -0.43
CBWD1-220ENST00000612045 APOPT1Q96IL0 206 aa12.36□□□□□ -0.43
CBWD1-220ENST00000612045 MRGPRX3Q96LB0 322 aa12.36□□□□□ -0.43
CBWD1-220ENST00000612045 MFSD1Q9H3U5 465 aa12.36□□□□□ -0.43
CBWD1-220ENST00000612045 C2orf81A6NN90 581 aa12.35□□□□□ -0.43
CBWD1-220ENST00000612045 COPEO14579 308 aa12.35□□□□□ -0.43
CBWD1-220ENST00000612045 TPP1O14773 563 aa12.35□□□□□ -0.43
CBWD1-220ENST00000612045 TM9SF1O15321 606 aa12.35□□□□□ -0.43
CBWD1-220ENST00000612045 BNIP3LO60238 219 aa12.35□□□□□ -0.43
CBWD1-220ENST00000612045 RPP40O75818 363 aaKnown RBP12.35□□□□□ -0.43
CBWD1-220ENST00000612045 ASMTLO95671 621 aa12.35□□□□□ -0.43
CBWD1-220ENST00000612045 LAMP2P13473 410 aa12.35□□□□□ -0.43
CBWD1-220ENST00000612045 SERPINA4P29622 427 aa12.35□□□□□ -0.43
CBWD1-220ENST00000612045 ABL2P42684 1182 aa12.35□□□□□ -0.43
CBWD1-220ENST00000612045 ABCG1P45844 678 aa12.35□□□□□ -0.43
CBWD1-220ENST00000612045 GRIA4P48058 902 aa12.35□□□□□ -0.43
CBWD1-220ENST00000612045 SLC6A11P48066 632 aa12.35□□□□□ -0.43
CBWD1-220ENST00000612045 CCNHP51946 323 aaPredicted RBP12.35□□□□□ -0.43
CBWD1-220ENST00000612045 NEK3P51956 506 aa12.35□□□□□ -0.43
CBWD1-220ENST00000612045 ZNF140P52738 457 aaPredicted RBP12.35□□□□□ -0.43
CBWD1-220ENST00000612045 EPHB1P54762 984 aa12.35□□□□□ -0.43
CBWD1-220ENST00000612045 WDR4P57081 412 aaKnown RBP12.35□□□□□ -0.43
CBWD1-220ENST00000612045 RPL26P61254 145 aaKnown RBP12.35□□□□□ -0.43
CBWD1-220ENST00000612045 PRAMEP78395 509 aa12.35□□□□□ -0.43
CBWD1-220ENST00000612045 TMPRSS15P98073 1019 aa12.35□□□□□ -0.43
CBWD1-220ENST00000612045 MPP1Q00013 466 aa12.35□□□□□ -0.43
CBWD1-220ENST00000612045 LRIT3Q3SXY7 679 aa12.35□□□□□ -0.43
CBWD1-220ENST00000612045 CARD16Q5EG05 197 aa12.35□□□□□ -0.43
CBWD1-220ENST00000612045 KIAA0408Q6ZU52 694 aa12.35□□□□□ -0.43
CBWD1-220ENST00000612045 MICALCLQ6ZW33 695 aa12.35□□□□□ -0.43
CBWD1-220ENST00000612045 ZC3HC1Q86WB0 502 aaKnown RBP12.35□□□□□ -0.43
CBWD1-220ENST00000612045 DCLK2Q8N568 766 aa12.35□□□□□ -0.43
CBWD1-220ENST00000612045 OR13C4Q8NGS5 318 aa12.35□□□□□ -0.43
CBWD1-220ENST00000612045 CALML6Q8TD86 181 aa12.35□□□□□ -0.43
CBWD1-220ENST00000612045 TCP10LQ8TDR4 215 aa12.35□□□□□ -0.43
CBWD1-220ENST00000612045 ACMSDQ8TDX5 336 aa12.35□□□□□ -0.43
CBWD1-220ENST00000612045 SORCS1Q8WY21 1168 aa12.35□□□□□ -0.43
CBWD1-220ENST00000612045 ISL2Q96A47 359 aa12.35□□□□□ -0.43
CBWD1-220ENST00000612045 TBATAQ96M53 351 aa12.35□□□□□ -0.43
CBWD1-220ENST00000612045 PLA2G2FQ9BZM2 168 aa12.35□□□□□ -0.43
CBWD1-220ENST00000612045 CIPCQ9C0C6 399 aa12.35□□□□□ -0.43
CBWD1-220ENST00000612045 EPN3Q9H201 632 aa12.35□□□□□ -0.43
CBWD1-220ENST00000612045 TTYH1Q9H313 450 aaPredicted RBP12.35□□□□□ -0.43
CBWD1-220ENST00000612045 RHOJQ9H4E5 214 aa12.35□□□□□ -0.43
CBWD1-220ENST00000612045 CCDC134Q9H6E4 229 aa12.35□□□□□ -0.43
CBWD1-220ENST00000612045 KIF26AQ9ULI4 1882 aaPredicted RBP12.35□□□□□ -0.43
CBWD1-220ENST00000612045 RPL26L1Q9UNX3 145 aaKnown RBP12.35□□□□□ -0.43
CBWD1-220ENST00000612045 MTO1Q9Y2Z2 717 aaKnown RBP12.35□□□□□ -0.43
CBWD1-220ENST00000612045 SRRM3A6NNA2 597 aaPredicted RBP12.34□□□□□ -0.43
CBWD1-220ENST00000612045 POP4O95707 220 aaKnown RBP12.34□□□□□ -0.43
CBWD1-220ENST00000612045 ATP5BP06576 529 aaKnown RBP12.34□□□□□ -0.43
CBWD1-220ENST00000612045 DLDP09622 509 aaKnown RBP12.34□□□□□ -0.43
CBWD1-220ENST00000612045 MTHFRP42898 656 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 VASPP50552 380 aaPredicted RBP12.34□□□□□ -0.43
CBWD1-220ENST00000612045 GRM2Q14416 872 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 GRIN2CQ14957 1233 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 PTPRRQ15256 657 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 DPY19L3Q6ZPD9 716 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 Q6ZVU0 165 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 PTAR1Q7Z6K3 402 aaPredicted RBP12.34□□□□□ -0.43
CBWD1-220ENST00000612045 TAX1BP1Q86VP1 789 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 PLPP6Q8IY26 295 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 YAF2Q8IY57 180 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 NDUFAF2Q8N183 169 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 OR4K2Q8NGD2 314 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 GABPB2Q8TAK5 448 aaPredicted RBP12.34□□□□□ -0.43
CBWD1-220ENST00000612045 GDAP1Q8TB36 358 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 FRS2Q8WU20 508 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 SPOCK2Q92563 424 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 ELSPBP1Q96BH3 223 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 VPS39Q96JC1 886 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 MSLNLQ96KJ4 702 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 TUBGCP5Q96RT8 1024 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 SRPK1Q96SB4 655 aaKnown RBP12.34□□□□□ -0.43
CBWD1-220ENST00000612045 KXD1Q9BQD3 176 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 CPEB1Q9BZB8 566 aaKnown RBP12.34□□□□□ -0.43
CBWD1-220ENST00000612045 SLC13A1Q9BZW2 595 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 POMKQ9H5K3 350 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 SUDS3Q9H7L9 328 aaPredicted RBP12.34□□□□□ -0.43
CBWD1-220ENST00000612045 PCMTD2Q9NV79 361 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 NLE1Q9NVX2 485 aaPredicted RBP12.34□□□□□ -0.43
CBWD1-220ENST00000612045 MKS1Q9NXB0 559 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 HACD3Q9P035 362 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 DEC1Q9P2X7 70 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 FBXO5Q9UKT4 447 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 A0A0J9YYE9 177 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 CCDC162PA2VCL2 907 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 OR51F1A6NGY5 319 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 TTC34A8MYJ7 566 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 GOT2P00505 430 aaKnown RBP12.34□□□□□ -0.43
CBWD1-220ENST00000612045 TRBC1P01850 177 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms