RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 CEACAM7Q14002 265 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 TLR1Q15399 786 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 SLC44A4Q53GD3 710 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 OR52E8Q6IFG1 317 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 LGI2Q8N0V4 545 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 CLYBLQ8N0X4 340 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 NPWQ8N729 165 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 DDHD1Q8NEL9 900 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 ARNTL2Q8WYA1 636 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 C19orf60Q96EN9 201 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 ZBED3Q96IU2 234 aaPredicted RBP6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 CCDC28BQ9BUN5 200 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 OSBPL11Q9BXB4 747 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 DGCR6LQ9BY27 220 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 TRIM8Q9BZR9 551 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 UNC93B1Q9H1C4 597 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 VRTNQ9H8Y1 702 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 AGO3Q9H9G7 860 aaKnown RBP6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 WWOXQ9NZC7 414 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 MARCH2Q9P0N8 246 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 KIF17Q9P2E2 1029 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 SLC27A5Q9Y2P5 690 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 ZBTB42B2RXF5 422 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 BTBD19C9JJ37 291 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 FZD9O00144 591 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 PRKCGP05129 697 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 CES1P23141 567 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 PRDX6P30041 224 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 GSSP48637 474 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 ZNF157P51786 506 aaPredicted RBP6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 CRYBB1P53674 252 aaPredicted RBP6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 NIPAL4Q0D2K0 466 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 MFSD14CQ5VZR4 134 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 TAF2Q6P1X5 1199 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 GLT6D1Q7Z4J2 308 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 PIM3Q86V86 326 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 RALGPS2Q86X27 583 aaPredicted RBP6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 PARP8Q8N3A8 854 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 CANT1Q8WVQ1 401 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 GATA6Q92908 595 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 TCF12Q99081 682 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 SORT1Q99523 831 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 MTG1Q9BT17 334 aaPredicted RBP6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 C9orf16Q9BUW7 83 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 CATSPERZQ9NTU4 200 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 ATXN10Q9UBB4 475 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 RAB26Q9ULW5 256 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 TLL2Q9Y6L7 1015 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 SF3B1O75533 1304 aaKnown RBP eCLIP6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 SMIM35A0A1B0GVV1 85 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 A0A1W2PQH9 124 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 KANSL1LA0AUZ9 987 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 MOXD2PA6NHM9 499 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 C16orf96A6NNT2 1141 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 H3BMM5 538 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 M0R3G1 203 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 UBXN8O00124 270 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 FFAR3O14843 346 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 FGF10O15520 208 aaPredicted RBP6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 GPR42O15529 346 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 FAM189A1O60320 539 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 COL6A2P12110 1019 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 OXCT1P55809 520 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 NUP107P57740 925 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 NOL9Q5SY16 702 aaKnown RBP6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 IL27RAQ6UWB1 636 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 ZNF534Q76KX8 674 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 ATAD1Q8NBU5 361 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 GFM2Q969S9 779 aaKnown RBP6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 VPS33AQ96AX1 596 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 RTP4Q96DX8 246 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 PPM1MQ96MI6 270 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 SMOQ99835 787 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 CLK4Q9HAZ1 481 aaKnown RBP6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 PNPLA3Q9NST1 481 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 MTMR10Q9NXD2 777 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 ANAPC2Q9UJX6 822 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 DMTF1Q9Y222 760 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 PTCH2Q9Y6C5 1203 aa6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 COL2A1P02458 1487 aaPredicted RBP6.89□□□□□ -1.31
SYNPO2-206ENST00000610556 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 HMX2A2RU54 273 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 MEIS3P2A8K0S8 358 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 CLIC3O95833 236 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 HLA-DQB2P05538 268 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 NR4A1P22736 598 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 PIK3CGP48736 1102 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 SLC5A3P53794 718 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 NRG1Q02297 640 aaPredicted RBP6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 ZNF177Q13360 481 aaPredicted RBP6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 PTPRCAPQ14761 206 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 PAFAH1B3Q15102 231 aaKnown RBP6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 TAZQ16635 292 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 TIGD5Q53EQ6 642 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 FAM171A1Q5VUB5 890 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 KLHDC10Q6PID8 442 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 GPRIN1Q7Z2K8 1008 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 SPNS2Q8IVW8 549 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 TXNDC5Q8NBS9 432 aaKnown RBP6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 STAG3L4Q8TBR4 150 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms