RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 CCDC181Q5TID7 509 aa14.35□□□□□ -0.11
HDDC2-209ENST00000609477 LIPIQ6XZB0 460 aa14.35□□□□□ -0.11
HDDC2-209ENST00000609477 GCNT7Q6ZNI0 430 aa14.35□□□□□ -0.11
HDDC2-209ENST00000609477 USP45Q70EL2 814 aa14.35□□□□□ -0.11
HDDC2-209ENST00000609477 CNTD1Q8N815 330 aa14.35□□□□□ -0.11
HDDC2-209ENST00000609477 TTC13Q8NBP0 860 aa14.35□□□□□ -0.11
HDDC2-209ENST00000609477 PDCD6IPQ8WUM4 868 aaKnown RBP14.35□□□□□ -0.11
HDDC2-209ENST00000609477 ALG3Q92685 438 aa14.35□□□□□ -0.11
HDDC2-209ENST00000609477 HAUS1Q96CS2 278 aa14.35□□□□□ -0.11
HDDC2-209ENST00000609477 BMFQ96LC9 184 aa14.35□□□□□ -0.11
HDDC2-209ENST00000609477 TEKT5Q96M29 485 aa14.35□□□□□ -0.11
HDDC2-209ENST00000609477 ALS2CR12Q96Q35 445 aa14.35□□□□□ -0.11
HDDC2-209ENST00000609477 MCCC1Q96RQ3 725 aaPredicted RBP14.35□□□□□ -0.11
HDDC2-209ENST00000609477 WRAP53Q9BUR4 548 aaKnown RBP14.35□□□□□ -0.11
HDDC2-209ENST00000609477 TDRD1Q9BXT4 1180 aaKnown RBP14.35□□□□□ -0.11
HDDC2-209ENST00000609477 SLC25A51Q9H1U9 297 aa14.35□□□□□ -0.11
HDDC2-209ENST00000609477 TRIM10Q9UDY6 481 aa14.35□□□□□ -0.11
HDDC2-209ENST00000609477 FNDC3AQ9Y2H6 1198 aaKnown RBP14.35□□□□□ -0.11
HDDC2-209ENST00000609477 TTLL3Q9Y4R7 772 aa14.35□□□□□ -0.11
HDDC2-209ENST00000609477 TP53BP1Q12888 1972 aaPredicted RBP14.34□□□□□ -0.11
HDDC2-209ENST00000609477 TMEM131Q92545 1883 aa14.34□□□□□ -0.11
HDDC2-209ENST00000609477 H0Y8X5 98 aa14.34□□□□□ -0.11
HDDC2-209ENST00000609477 LZTS3O60299 673 aaPredicted RBP14.34□□□□□ -0.11
HDDC2-209ENST00000609477 KCNK5O95279 499 aa14.34□□□□□ -0.11
HDDC2-209ENST00000609477 PYGMP11217 842 aa14.34□□□□□ -0.11
HDDC2-209ENST00000609477 PECAM1P16284 738 aaPredicted RBP14.34□□□□□ -0.11
HDDC2-209ENST00000609477 ZNF30P17039 623 aa14.34□□□□□ -0.11
HDDC2-209ENST00000609477 ITIH2P19823 946 aa14.34□□□□□ -0.11
HDDC2-209ENST00000609477 VIPR1P32241 457 aa14.34□□□□□ -0.11
HDDC2-209ENST00000609477 PFN3P60673 137 aa14.34□□□□□ -0.11
HDDC2-209ENST00000609477 DSC2Q02487 901 aa14.34□□□□□ -0.11
HDDC2-209ENST00000609477 RALGDSQ12967 914 aa14.34□□□□□ -0.11
HDDC2-209ENST00000609477 ZBTB17Q13105 803 aa14.34□□□□□ -0.11
HDDC2-209ENST00000609477 NOMO1Q15155 1222 aa14.34□□□□□ -0.11
HDDC2-209ENST00000609477 LRRC73Q5JTD7 316 aa14.34□□□□□ -0.11
HDDC2-209ENST00000609477 LAYNQ6UX15 382 aa14.34□□□□□ -0.11
HDDC2-209ENST00000609477 Q6ZSR6 202 aa14.34□□□□□ -0.11
HDDC2-209ENST00000609477 SPATS2Q86XZ4 545 aaKnown RBP14.34□□□□□ -0.11
HDDC2-209ENST00000609477 CBARPQ8N350 705 aaPredicted RBP14.34□□□□□ -0.11
HDDC2-209ENST00000609477 TP53I13Q8NBR0 393 aaPredicted RBP14.34□□□□□ -0.11
HDDC2-209ENST00000609477 TRIM58Q8NG06 486 aa14.34□□□□□ -0.11
HDDC2-209ENST00000609477 OR2I1PQ8NGU4 316 aa14.34□□□□□ -0.11
HDDC2-209ENST00000609477 PIH1D2Q8WWB5 315 aa14.34□□□□□ -0.11
HDDC2-209ENST00000609477 HTR3CQ8WXA8 447 aa14.34□□□□□ -0.11
HDDC2-209ENST00000609477 IMP4Q96G21 291 aaKnown RBP14.34□□□□□ -0.11
HDDC2-209ENST00000609477 QKIQ96PU8 341 aaKnown RBP eCLIP14.34□□□□□ -0.11
HDDC2-209ENST00000609477 HEMGNQ9BXL5 484 aa14.34□□□□□ -0.11
HDDC2-209ENST00000609477 ADGRE3Q9BY15 652 aa14.34□□□□□ -0.11
HDDC2-209ENST00000609477 IL21RQ9HBE5 538 aa14.34□□□□□ -0.11
HDDC2-209ENST00000609477 SAE1Q9UBE0 346 aaPredicted RBP14.34□□□□□ -0.11
HDDC2-209ENST00000609477 TRHDEQ9UKU6 1024 aa14.34□□□□□ -0.11
HDDC2-209ENST00000609477 CAPN6Q9Y6Q1 641 aa14.34□□□□□ -0.11
HDDC2-209ENST00000609477 DNAH14Q0VDD8 3507 aa14.34□□□□□ -0.11
HDDC2-209ENST00000609477 ASCC3Q8N3C0 2202 aaKnown RBP14.34□□□□□ -0.11
HDDC2-209ENST00000609477 A0A0J9YYE9 177 aa14.33□□□□□ -0.12
HDDC2-209ENST00000609477 A0A0U1RQJ8 604 aa14.33□□□□□ -0.12
HDDC2-209ENST00000609477 SPTY2D1-AS1A0A0U1RR47 76 aa14.33□□□□□ -0.12
HDDC2-209ENST00000609477 TTC24A2A3L6 582 aaPredicted RBP14.33□□□□□ -0.12
HDDC2-209ENST00000609477 POM121BA6NF01 834 aa14.33□□□□□ -0.12
HDDC2-209ENST00000609477 RAD51BO15315 384 aa14.33□□□□□ -0.12
HDDC2-209ENST00000609477 DDX3YO15523 660 aaKnown RBP14.33□□□□□ -0.12
HDDC2-209ENST00000609477 TRBC1P01850 177 aa14.33□□□□□ -0.12
HDDC2-209ENST00000609477 PTPN3P26045 913 aa14.33□□□□□ -0.12
HDDC2-209ENST00000609477 GRK6P43250 576 aa14.33□□□□□ -0.12
HDDC2-209ENST00000609477 EPHB1P54762 984 aa14.33□□□□□ -0.12
HDDC2-209ENST00000609477 CLDN2P57739 230 aa14.33□□□□□ -0.12
HDDC2-209ENST00000609477 NIPAL4Q0D2K0 466 aa14.33□□□□□ -0.12
HDDC2-209ENST00000609477 ARHGEF7Q14155 803 aa14.33□□□□□ -0.12
HDDC2-209ENST00000609477 PPM1JQ5JR12 505 aa14.33□□□□□ -0.12
HDDC2-209ENST00000609477 ZC3H18Q86VM9 953 aaKnown RBP14.33□□□□□ -0.12
HDDC2-209ENST00000609477 NAXDQ8IW45 347 aa14.33□□□□□ -0.12
HDDC2-209ENST00000609477 OR13H1Q8NG92 308 aa14.33□□□□□ -0.12
HDDC2-209ENST00000609477 TADA1Q96BN2 335 aa14.33□□□□□ -0.12
HDDC2-209ENST00000609477 AGAP3Q96P47 875 aa14.33□□□□□ -0.12
HDDC2-209ENST00000609477 LYSMD1Q96S90 227 aa14.33□□□□□ -0.12
HDDC2-209ENST00000609477 SRPK1Q96SB4 655 aaKnown RBP14.33□□□□□ -0.12
HDDC2-209ENST00000609477 CDC6Q99741 560 aa14.33□□□□□ -0.12
HDDC2-209ENST00000609477 PCDH9Q9HC56 1237 aa14.33□□□□□ -0.12
HDDC2-209ENST00000609477 FZD3Q9NPG1 666 aa14.33□□□□□ -0.12
HDDC2-209ENST00000609477 SEPT10Q9P0V9 454 aa14.33□□□□□ -0.12
HDDC2-209ENST00000609477 B4GALT6Q9UBX8 382 aa14.33□□□□□ -0.12
HDDC2-209ENST00000609477 CACNA1AO00555 2505 aa14.32□□□□□ -0.12
HDDC2-209ENST00000609477 ANKRD66B4E2M5 251 aa14.32□□□□□ -0.12
HDDC2-209ENST00000609477 RECQL5O94762 991 aaPredicted RBP14.32□□□□□ -0.12
HDDC2-209ENST00000609477 HEXIM1O94992 359 aaKnown RBP14.32□□□□□ -0.12
HDDC2-209ENST00000609477 FTCDO95954 541 aa14.32□□□□□ -0.12
HDDC2-209ENST00000609477 EPOP01588 193 aa14.32□□□□□ -0.12
HDDC2-209ENST00000609477 PTMAP06454 111 aaKnown RBP14.32□□□□□ -0.12
HDDC2-209ENST00000609477 MMP2P08253 660 aa14.32□□□□□ -0.12
HDDC2-209ENST00000609477 PDHA1P08559 390 aa14.32□□□□□ -0.12
HDDC2-209ENST00000609477 HOXC4P09017 264 aaPredicted RBP14.32□□□□□ -0.12
HDDC2-209ENST00000609477 EPHA8P29322 1005 aaPredicted RBP14.32□□□□□ -0.12
HDDC2-209ENST00000609477 CD86P42081 329 aa14.32□□□□□ -0.12
HDDC2-209ENST00000609477 NOVA1P51513 510 aaKnown RBP14.32□□□□□ -0.12
HDDC2-209ENST00000609477 THOP1P52888 689 aa14.32□□□□□ -0.12
HDDC2-209ENST00000609477 SKOR1P84550 965 aa14.32□□□□□ -0.12
HDDC2-209ENST00000609477 WASHC5Q12768 1159 aa14.32□□□□□ -0.12
HDDC2-209ENST00000609477 MTM1Q13496 603 aa14.32□□□□□ -0.12
HDDC2-209ENST00000609477 LLGL1Q15334 1064 aa14.32□□□□□ -0.12
HDDC2-209ENST00000609477 MEI1Q5TIA1 1274 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms