RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 MMP12P39900 470 aa13.46□□□□□ -0.25
POLR2J3-219ENST00000608621 BCL2L1Q07817 233 aa13.46□□□□□ -0.25
POLR2J3-219ENST00000608621 MTM1Q13496 603 aa13.46□□□□□ -0.25
POLR2J3-219ENST00000608621 LY6DQ14210 128 aa13.46□□□□□ -0.25
POLR2J3-219ENST00000608621 NCAPHQ15003 741 aa13.46□□□□□ -0.25
POLR2J3-219ENST00000608621 PLEKHA7Q6IQ23 1121 aa13.46□□□□□ -0.25
POLR2J3-219ENST00000608621 LIPIQ6XZB0 460 aa13.46□□□□□ -0.25
POLR2J3-219ENST00000608621 B3GNT8Q7Z7M8 397 aa13.46□□□□□ -0.25
POLR2J3-219ENST00000608621 CLEC14AQ86T13 490 aa13.46□□□□□ -0.25
POLR2J3-219ENST00000608621 ARHGAP12Q8IWW6 846 aa13.46□□□□□ -0.25
POLR2J3-219ENST00000608621 FBXO39Q8N4B4 442 aa13.46□□□□□ -0.25
POLR2J3-219ENST00000608621 PAF1Q8N7H5 531 aa13.46□□□□□ -0.25
POLR2J3-219ENST00000608621 SNRNP27Q8WVK2 155 aaKnown RBP13.46□□□□□ -0.25
POLR2J3-219ENST00000608621 LIN37Q96GY3 246 aaPredicted RBP13.46□□□□□ -0.25
POLR2J3-219ENST00000608621 KCTD15Q96SI1 283 aaPredicted RBP13.46□□□□□ -0.25
POLR2J3-219ENST00000608621 RBM15Q96T37 977 aaKnown RBP eCLIP13.46□□□□□ -0.25
POLR2J3-219ENST00000608621 SYT11Q9BT88 431 aa13.46□□□□□ -0.25
POLR2J3-219ENST00000608621 SNRNP25Q9BV90 132 aaKnown RBP13.46□□□□□ -0.25
POLR2J3-219ENST00000608621 HSD3B7Q9H2F3 369 aa13.46□□□□□ -0.25
POLR2J3-219ENST00000608621 ATP13A3Q9H7F0 1226 aa13.46□□□□□ -0.25
POLR2J3-219ENST00000608621 EPB41L5Q9HCM4 733 aa13.46□□□□□ -0.25
POLR2J3-219ENST00000608621 TMEM202A6NGA9 273 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 CAPN8A6NHC0 703 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 A8MX80 341 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 EIF3CLB5ME19 914 aaKnown RBP13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 K7ENP7 123 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 DFFAO00273 331 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 PLD2O14939 933 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 TEX33O43247 280 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 ATMINO43313 823 aaPredicted RBP13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 RNF8O76064 485 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 RPLP0P05388 317 aaKnown RBP13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 UGT1A5P35504 534 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 MLLT3P42568 568 aaPredicted RBP13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 SCNN1BP51168 640 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 POLR2LP62875 67 aaKnown RBP13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 NSUN2Q08J23 767 aaKnown RBP eCLIP13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 RALGDSQ12967 914 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 CLN3Q13286 438 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 STX1AQ16623 288 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 ZSCAN23Q3MJ62 389 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 AFMIDQ63HM1 303 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 INO80CQ6PI98 192 aaPredicted RBP13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 OGFOD3Q6PK18 319 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 CCDC81Q6ZN84 652 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 ARHGAP36Q6ZRI8 547 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 RFX8Q6ZV50 586 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 RAB11FIP2Q7L804 512 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 TAF8Q7Z7C8 310 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 FAM46DQ8NEK8 389 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 GPR156Q8NFN8 814 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 OR6C4Q8NGE1 309 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 OR56A4Q8NGH8 313 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 OR1E3Q8WZA6 343 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 TTC9Q92623 222 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 FUBP1Q96AE4 644 aaKnown RBP13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 ECHDC3Q96DC8 303 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 PDXPQ96GD0 296 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 NSMCE3Q96MG7 304 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 PEBP4Q96S96 227 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 EIF3CQ99613 913 aaKnown RBP13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 CINPQ9BW66 212 aaPredicted RBP13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 FOXP3Q9BZS1 431 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 SEMA4CQ9C0C4 833 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 LRRN3Q9H3W5 708 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 SP110Q9HB58 689 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 MRPL40Q9NQ50 206 aaKnown RBP13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 DGKBQ9Y6T7 804 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 ZNF462Q96JM2 2506 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 ANKRD36A6QL64 1941 aa13.45□□□□□ -0.26
POLR2J3-219ENST00000608621 TMEM191CA6NGB0 347 aa13.44□□□□□ -0.26
POLR2J3-219ENST00000608621 TMX2-CTNND1H3BSU7 103 aa13.44□□□□□ -0.26
POLR2J3-219ENST00000608621 CACNB4O00305 520 aaPredicted RBP13.44□□□□□ -0.26
POLR2J3-219ENST00000608621 TRAFD1O14545 582 aaPredicted RBP13.44□□□□□ -0.26
POLR2J3-219ENST00000608621 ITGA2BP08514 1039 aa13.44□□□□□ -0.26
POLR2J3-219ENST00000608621 ELFN1P0C7U0 828 aa13.44□□□□□ -0.26
POLR2J3-219ENST00000608621 ATP1A3P13637 1013 aa13.44□□□□□ -0.26
POLR2J3-219ENST00000608621 GM2AP17900 193 aa13.44□□□□□ -0.26
POLR2J3-219ENST00000608621 MIPP30301 263 aa13.44□□□□□ -0.26
POLR2J3-219ENST00000608621 SLC5A2P31639 672 aa13.44□□□□□ -0.26
POLR2J3-219ENST00000608621 INHBCP55103 352 aa13.44□□□□□ -0.26
POLR2J3-219ENST00000608621 KIAA1024LP59773 190 aa13.44□□□□□ -0.26
POLR2J3-219ENST00000608621 IL10RBQ08334 325 aa13.44□□□□□ -0.26
POLR2J3-219ENST00000608621 PPP6R3Q5H9R7 873 aaPredicted RBP13.44□□□□□ -0.26
POLR2J3-219ENST00000608621 KIAA1614Q5VZ46 1190 aa13.44□□□□□ -0.26
POLR2J3-219ENST00000608621 PPP1R2P3Q6NXS1 205 aa13.44□□□□□ -0.26
POLR2J3-219ENST00000608621 SFTPA2Q8IWL1 248 aa13.44□□□□□ -0.26
POLR2J3-219ENST00000608621 TP53INP2Q8IXH6 220 aa13.44□□□□□ -0.26
POLR2J3-219ENST00000608621 Q8N9G6 341 aaPredicted RBP13.44□□□□□ -0.26
POLR2J3-219ENST00000608621 LGR4Q9BXB1 951 aa13.44□□□□□ -0.26
POLR2J3-219ENST00000608621 TRIM7Q9C029 511 aa13.44□□□□□ -0.26
POLR2J3-219ENST00000608621 STRADBQ9C0K7 418 aa13.44□□□□□ -0.26
POLR2J3-219ENST00000608621 TMEM168Q9H0V1 697 aa13.44□□□□□ -0.26
POLR2J3-219ENST00000608621 FGF22Q9HCT0 170 aa13.44□□□□□ -0.26
POLR2J3-219ENST00000608621 WDR70Q9NW82 654 aa13.44□□□□□ -0.26
POLR2J3-219ENST00000608621 MOSPD1Q9UJG1 213 aa13.44□□□□□ -0.26
POLR2J3-219ENST00000608621 MYO6Q9UM54 1294 aa13.44□□□□□ -0.26
POLR2J3-219ENST00000608621 LRP4O75096 1905 aa13.44□□□□□ -0.26
POLR2J3-219ENST00000608621 ATMQ13315 3056 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms