RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 LPCAT1Q8NF37 534 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 SPATA22Q8NHS9 363 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 CCDC110Q8TBZ0 833 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 RMDN1Q96DB5 314 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 WDR24Q96S15 920 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 WRAP53Q9BUR4 548 aaKnown RBP14.33□□□□□ -0.12
CTSA-219ENST00000607841 C1QTNF2Q9BXJ5 285 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 NUSAP1Q9BXS6 441 aaKnown RBP14.33□□□□□ -0.12
CTSA-219ENST00000607841 TM9SF3Q9HD45 589 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 AASDHPPTQ9NRN7 309 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 GOLGA6AQ9NYA3 693 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 GGT7Q9UJ14 662 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 SLC6A14Q9UN76 642 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 DRG1Q9Y295 367 aaKnown RBP14.33□□□□□ -0.12
CTSA-219ENST00000607841 SAR1BQ9Y6B6 198 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 EML5Q05BV3 1969 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 A0A0J9YYE9 177 aa14.32□□□□□ -0.12
CTSA-219ENST00000607841 GOLGA6L10A0A0M3HER8 536 aa14.32□□□□□ -0.12
CTSA-219ENST00000607841 ANKRD66B4E2M5 251 aa14.32□□□□□ -0.12
CTSA-219ENST00000607841 LZTS3O60299 673 aaPredicted RBP14.32□□□□□ -0.12
CTSA-219ENST00000607841 PMPCBO75439 489 aa14.32□□□□□ -0.12
CTSA-219ENST00000607841 PRLP01236 227 aa14.32□□□□□ -0.12
CTSA-219ENST00000607841 EPOP01588 193 aa14.32□□□□□ -0.12
CTSA-219ENST00000607841 TRBC1P01850 177 aa14.32□□□□□ -0.12
CTSA-219ENST00000607841 CFIP05156 583 aa14.32□□□□□ -0.12
CTSA-219ENST00000607841 ELFN1P0C7U0 828 aa14.32□□□□□ -0.12
CTSA-219ENST00000607841 VIPR1P32241 457 aa14.32□□□□□ -0.12
CTSA-219ENST00000607841 ARHGEF7Q14155 803 aa14.32□□□□□ -0.12
CTSA-219ENST00000607841 IHHQ14623 411 aa14.32□□□□□ -0.12
CTSA-219ENST00000607841 CCDC6Q16204 474 aa14.32□□□□□ -0.12
CTSA-219ENST00000607841 PARP6Q2NL67 630 aa14.32□□□□□ -0.12
CTSA-219ENST00000607841 CCDC89Q8N998 374 aa14.32□□□□□ -0.12
CTSA-219ENST00000607841 C1orf216Q8TAB5 229 aa14.32□□□□□ -0.12
CTSA-219ENST00000607841 FAM174AQ8TBP5 190 aa14.32□□□□□ -0.12
CTSA-219ENST00000607841 COG1Q8WTW3 980 aa14.32□□□□□ -0.12
CTSA-219ENST00000607841 KLK6Q92876 244 aa14.32□□□□□ -0.12
CTSA-219ENST00000607841 RTP4Q96DX8 246 aa14.32□□□□□ -0.12
CTSA-219ENST00000607841 MS4A14Q96JA4 679 aa14.32□□□□□ -0.12
CTSA-219ENST00000607841 LENG8Q96PV6 779 aaPredicted RBP14.32□□□□□ -0.12
CTSA-219ENST00000607841 MCCC1Q96RQ3 725 aaPredicted RBP14.32□□□□□ -0.12
CTSA-219ENST00000607841 SRPK1Q96SB4 655 aaKnown RBP14.32□□□□□ -0.12
CTSA-219ENST00000607841 ORAI3Q9BRQ5 295 aa14.32□□□□□ -0.12
CTSA-219ENST00000607841 MLPHQ9BV36 600 aaPredicted RBP14.32□□□□□ -0.12
CTSA-219ENST00000607841 EBF2Q9HAK2 575 aa14.32□□□□□ -0.12
CTSA-219ENST00000607841 KCTD5Q9NXV2 234 aa14.32□□□□□ -0.12
CTSA-219ENST00000607841 UBP1Q9NZI7 540 aa14.32□□□□□ -0.12
CTSA-219ENST00000607841 B4GALT6Q9UBX8 382 aa14.32□□□□□ -0.12
CTSA-219ENST00000607841 PSMD11O00231 422 aa14.31□□□□□ -0.12
CTSA-219ENST00000607841 MAGEC1O60732 1142 aa14.31□□□□□ -0.12
CTSA-219ENST00000607841 NDST3O95803 873 aa14.31□□□□□ -0.12
CTSA-219ENST00000607841 IFNB1P01574 187 aa14.31□□□□□ -0.12
CTSA-219ENST00000607841 SYPP08247 313 aa14.31□□□□□ -0.12
CTSA-219ENST00000607841 C6P13671 934 aa14.31□□□□□ -0.12
CTSA-219ENST00000607841 CTPS1P17812 591 aa14.31□□□□□ -0.12
CTSA-219ENST00000607841 CD38P28907 300 aa14.31□□□□□ -0.12
CTSA-219ENST00000607841 CASQ1P31415 396 aa14.31□□□□□ -0.12
CTSA-219ENST00000607841 HNF1BP35680 557 aa14.31□□□□□ -0.12
CTSA-219ENST00000607841 WNT3AP56704 352 aa14.31□□□□□ -0.12
CTSA-219ENST00000607841 ETF1P62495 437 aaKnown RBP14.31□□□□□ -0.12
CTSA-219ENST00000607841 LMNB2Q03252 620 aa14.31□□□□□ -0.12
CTSA-219ENST00000607841 OVGP1Q12889 678 aa14.31□□□□□ -0.12
CTSA-219ENST00000607841 FAM182AQ5T1J6 154 aa14.31□□□□□ -0.12
CTSA-219ENST00000607841 C4orf22Q6V702 233 aa14.31□□□□□ -0.12
CTSA-219ENST00000607841 GSTA5Q7RTV2 222 aa14.31□□□□□ -0.12
CTSA-219ENST00000607841 KDELC2Q7Z4H8 507 aa14.31□□□□□ -0.12
CTSA-219ENST00000607841 C17orf53Q8N3J3 647 aaPredicted RBP14.31□□□□□ -0.12
CTSA-219ENST00000607841 PRELID2Q8N945 189 aa14.31□□□□□ -0.12
CTSA-219ENST00000607841 MFSD2AQ8NA29 543 aa14.31□□□□□ -0.12
CTSA-219ENST00000607841 DENND6BQ8NEG7 585 aa14.31□□□□□ -0.12
CTSA-219ENST00000607841 SLC6A18Q96N87 628 aa14.31□□□□□ -0.12
CTSA-219ENST00000607841 TRIB3Q96RU7 358 aa14.31□□□□□ -0.12
CTSA-219ENST00000607841 LYSMD1Q96S90 227 aa14.31□□□□□ -0.12
CTSA-219ENST00000607841 FSD1LQ9BXM9 530 aa14.31□□□□□ -0.12
CTSA-219ENST00000607841 ZDHHC5Q9C0B5 715 aa14.31□□□□□ -0.12
CTSA-219ENST00000607841 RNF14Q9UBS8 474 aa14.31□□□□□ -0.12
CTSA-219ENST00000607841 HS3ST3A1Q9Y663 406 aa14.31□□□□□ -0.12
CTSA-219ENST00000607841 LOC285095A0A1B0GVY8 99 aa14.3□□□□□ -0.12
CTSA-219ENST00000607841 CAPN8A6NHC0 703 aa14.3□□□□□ -0.12
CTSA-219ENST00000607841 NPIPB15A6NHN6 443 aaPredicted RBP14.3□□□□□ -0.12
CTSA-219ENST00000607841 A8MX80 341 aa14.3□□□□□ -0.12
CTSA-219ENST00000607841 FPGTO14772 594 aa14.3□□□□□ -0.12
CTSA-219ENST00000607841 VILLO15195 856 aa14.3□□□□□ -0.12
CTSA-219ENST00000607841 PSMD3O43242 534 aa14.3□□□□□ -0.12
CTSA-219ENST00000607841 HEXIM1O94992 359 aaKnown RBP14.3□□□□□ -0.12
CTSA-219ENST00000607841 ALPIP09923 528 aa14.3□□□□□ -0.12
CTSA-219ENST00000607841 ZNF30P17039 623 aa14.3□□□□□ -0.12
CTSA-219ENST00000607841 HLA-DPA1P20036 260 aa14.3□□□□□ -0.12
CTSA-219ENST00000607841 PSMB4P28070 264 aa14.3□□□□□ -0.12
CTSA-219ENST00000607841 PAFAH1B1P43034 410 aa14.3□□□□□ -0.12
CTSA-219ENST00000607841 ATXN3P54252 364 aaPredicted RBP14.3□□□□□ -0.12
CTSA-219ENST00000607841 GDF10P55107 478 aa14.3□□□□□ -0.12
CTSA-219ENST00000607841 C21orf59P57076 290 aa14.3□□□□□ -0.12
CTSA-219ENST00000607841 SEMG2Q02383 582 aa14.3□□□□□ -0.12
CTSA-219ENST00000607841 RALGDSQ12967 914 aa14.3□□□□□ -0.12
CTSA-219ENST00000607841 GALNT3Q14435 633 aa14.3□□□□□ -0.12
CTSA-219ENST00000607841 AGERQ15109 404 aa14.3□□□□□ -0.12
CTSA-219ENST00000607841 QPCTQ16769 361 aa14.3□□□□□ -0.12
CTSA-219ENST00000607841 KDELC1Q6UW63 502 aa14.3□□□□□ -0.12
CTSA-219ENST00000607841 IL27RAQ6UWB1 636 aa14.3□□□□□ -0.12
CTSA-219ENST00000607841 LIPIQ6XZB0 460 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms