RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 STAMBPL1Q96FJ0 436 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 CHMP6Q96FZ7 201 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 ZNF641Q96N77 438 aaPredicted RBP5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 SLC2A13Q96QE2 648 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 KCTD15Q96SI1 283 aaPredicted RBP5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 TRIM51Q9BSJ1 452 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 CARS2Q9HA77 564 aaKnown RBP5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 FTSJ1Q9UET6 329 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 ZC3H7BQ9UGR2 993 aaKnown RBP5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 XPO7Q9UIA9 1087 aaKnown RBP5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 SLCO3A1Q9UIG8 710 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 PRDM4Q9UKN5 801 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 PCDHGC4Q9Y5F7 938 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 PCDHA3Q9Y5H8 950 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 GOLGA4Q13439 2230 aaKnown RBP5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 A0A0A0MRY4 1105 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 MATN3O15232 486 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 MID1O15344 667 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 YKT6O15498 198 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 HOXC11O43248 304 aaPredicted RBP5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 B4GALT3O60512 393 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 PHF2O75151 1096 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 ESRRBO95718 433 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 CATP04040 527 aaKnown RBP5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 JMJD7P0C870 316 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 NFKB1P19838 968 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 FECHP22830 423 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 WNT3AP56704 352 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 ZNF77Q15935 545 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 CCDC6Q16204 474 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 DUOXA1Q1HG43 343 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 EML3Q32P44 896 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 MFSD4BQ5TF39 518 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 EGFLAMQ63HQ2 1017 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 KIAA1161Q6NSJ0 714 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 DCP2Q8IU60 420 aaKnown RBP5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 MYO1HQ8N1T3 1032 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 PPM1NQ8N819 430 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 BRSK1Q8TDC3 778 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 MCOLN3Q8TDD5 553 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 NUS1Q96E22 293 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 ZSWIM3Q96MP5 696 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 SPATA13Q96N96 652 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 ARHGAP9Q9BRR9 750 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 ERP44Q9BS26 406 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 FAM167BQ9BTA0 163 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 CXCL16Q9H2A7 254 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 TMEM248Q9NWD8 314 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 CLEC1BQ9P126 229 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 DMTF1Q9Y222 760 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 CCL26Q9Y258 94 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 TDRKHQ9Y2W6 561 aaKnown RBP5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 RPS6KL1Q9Y6S9 549 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 RIF1Q5UIP0 2472 aaKnown RBP5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 COL11A1P12107 1806 aaPredicted RBP5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 FFAR2O15552 330 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 NARSO43776 548 aaKnown RBP5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 CACNG3O60359 315 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 PAK4O96013 591 aaPredicted RBP5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 GSRP00390 522 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 MT-ND3P03897 115 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 DDX5P17844 614 aaKnown RBP5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 POU3F3P20264 500 aaPredicted RBP5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 MZF1P28698 734 aaPredicted RBP5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 CCT8P50990 548 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 CCNG2Q16589 344 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 INO80DQ53TQ3 878 aaPredicted RBP5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 CRTC3Q6UUV7 619 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 BBS12Q6ZW61 710 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 NLRP14Q86W24 1093 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 PPIL6Q8IXY8 311 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 KIAA1958Q8N8K9 716 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 ZMIZ2Q8NF64 920 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 OR2W6PQ8NHA6 318 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 FAM174AQ8TBP5 190 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 ACTRT1Q8TDG2 376 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 ARL8AQ96BM9 186 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 CHFRQ96EP1 664 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 ZNF514Q96K75 400 aaPredicted RBP5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 PHF12Q96QT6 1004 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 TUBGCP5Q96RT8 1024 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 RBM15Q96T37 977 aaKnown RBP eCLIP5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 SLC39A8Q9C0K1 460 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 SLC25A51Q9H1U9 297 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 SIX2Q9NPC8 291 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 TBK1Q9UHD2 729 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 CDH22Q9UJ99 828 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 USP3Q9Y6I4 520 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 COLEC10Q9Y6Z7 277 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 R4GN57 208 aa5.19□□□□□ -1.58
SCARNA15-201ENST00000607520 IQANK1A0A1B0GTG1 560 aa5.18□□□□□ -1.58
SCARNA15-201ENST00000607520 C5orf60A6NFR6 353 aa5.18□□□□□ -1.58
SCARNA15-201ENST00000607520 C16orf96A6NNT2 1141 aa5.18□□□□□ -1.58
SCARNA15-201ENST00000607520 PRAMEF26H0Y7S4 382 aa5.18□□□□□ -1.58
SCARNA15-201ENST00000607520 DYRK3O43781 588 aa5.18□□□□□ -1.58
SCARNA15-201ENST00000607520 TTC4O95801 387 aa5.18□□□□□ -1.58
SCARNA15-201ENST00000607520 UNGP13051 313 aaPredicted RBP5.18□□□□□ -1.58
SCARNA15-201ENST00000607520 RBL1P28749 1068 aa5.18□□□□□ -1.58
SCARNA15-201ENST00000607520 CSTF2P33240 577 aaKnown RBP eCLIP5.18□□□□□ -1.58
SCARNA15-201ENST00000607520 JAM2P57087 298 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms