RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 FSTL5Q8N475 847 aaPredicted RBP4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 METTL25Q8N6Q8 603 aa4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 C11orf44Q8N8P7 122 aa4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 CNBD1Q8NA66 436 aa4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 Q8NA96 180 aa4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 ZBTB44Q8NCP5 570 aa4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 NSUN7Q8NE18 718 aaKnown RBP4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 IPMKQ8NFU5 416 aa4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 CADM4Q8NFZ8 388 aa4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 ZFP28Q8NHY6 868 aa4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 SPATA20Q8TB22 786 aa4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 NEK9Q8TD19 979 aa4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 RAB40AQ8WXH6 277 aa4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 OVCA2Q8WZ82 227 aa4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 HSPH1Q92598 858 aa4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 SAT2Q96F10 170 aaPredicted RBP4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 C1orf74Q96LT6 269 aa4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 CCDC114Q96M63 670 aa4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 CFAP57Q96MR6 1250 aa4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 TRIB1Q96RU8 372 aa4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 LMF1Q96S06 567 aa4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 SMOQ99835 787 aa4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 PTDSS2Q9BVG9 487 aa4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 MRPL1Q9BYD6 325 aaKnown RBP4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 VPS33BQ9H267 617 aa4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 EPC1Q9H2F5 836 aa4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 C12orf65Q9H3J6 166 aaKnown RBP4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 SMOC2Q9H3U7 446 aa4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 FBRSL1Q9HCM7 1045 aaKnown RBP4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 PFDN4Q9NQP4 134 aa4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 MBNL1Q9NR56 388 aaKnown RBP4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 SLC22A11Q9NSA0 550 aa4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 MCM9Q9NXL9 1143 aa4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 DDX43Q9NXZ2 648 aaKnown RBP4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 SEC63Q9UGP8 760 aaKnown RBP4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 SORCS3Q9UPU3 1222 aa4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 UBE2J1Q9Y385 318 aaPredicted RBP4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 TESMINQ9Y4I5 508 aa4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 SESN1Q9Y6P5 492 aa4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 A0A0C4DFX4 3053 aa4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 ARFGEF2Q9Y6D5 1785 aa4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 TJP1Q07157 1748 aa4.04□□□□□ -1.76
IGHV3-29-201ENST00000604817 KIAA0100Q14667 2235 aaKnown RBP4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 TCRBV21S2A2A0A5A6 115 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 FAM90A8PA6NJQ4 464 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 OR6C76A6NM76 312 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 MATN2O00339 956 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 HOXA3O43365 443 aaPredicted RBP4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 CDC14BO60729 498 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 PNPP00491 289 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 FAM90A13PP0C7W8 464 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 FAM90A24PP0C7X0 464 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 HSPA5P11021 654 aaKnown RBP4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 CYP2A6P11509 494 aaPredicted RBP4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 FCER1AP12319 257 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 ZNF8P17098 575 aaPredicted RBP4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 GNAT2P19087 354 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 TRIM21P19474 475 aaKnown RBP4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 TFEBP19484 476 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 DRD1P21728 446 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 ADORA2AP29274 412 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 PRKAR1BP31321 381 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 MTHFRP42898 656 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 MTNR1AP48039 350 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 GPC3P51654 580 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 MFAP4P55083 255 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 HUNKP57058 714 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 TIRAPP58753 221 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 TUBB4BP68371 445 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 CDK18Q07002 472 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 GOLGA8DPQ0D2H9 430 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 RPA4Q13156 261 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 SEMA3BQ13214 749 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 SLC39A6Q13433 755 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 TUBB3Q13509 450 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 GSTA3Q16772 222 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 HYAL4Q2M3T9 481 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 KBTBD12Q3ZCT8 623 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 AASDHQ4L235 1098 aaPredicted RBP4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 NHSL2Q5HYW2 709 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 CERCAMQ5T4B2 595 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 CST9LP1Q5W188 147 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 HMBOX1Q6NT76 420 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 TAPT1Q6NXT6 567 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 TMEM81Q6P7N7 255 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 DRICH1Q6PGQ1 229 aaPredicted RBP4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 OLFM4Q6UX06 510 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 TMEM108Q6UXF1 575 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 RRM2BQ7LG56 351 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 SLC46A3Q7Z3Q1 461 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 TMPRSS9Q7Z410 1059 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 DSG4Q86SJ6 1040 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 NBPF5PQ86XG9 351 aaPredicted RBP4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 TBC1D21Q8IYX1 336 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 MINDY1Q8N5J2 469 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 XXYLT1Q8NBI6 393 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 MRPS27Q92552 414 aaKnown RBP4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 CORO2AQ92828 525 aa4.03□□□□□ -1.76
IGHV3-29-201ENST00000604817 SMARCE1Q969G3 411 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms