RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 PNMA8BQ9ULN7 279 aaPredicted RBP17.94■□□□□ 0.46
SHKBP1-227ENST00000602011 MYO6Q9UM54 1294 aa17.94■□□□□ 0.46
SHKBP1-227ENST00000602011 RP1P56715 2156 aa17.93■□□□□ 0.46
SHKBP1-227ENST00000602011 LGALS16A8MUM7 142 aa17.93■□□□□ 0.46
SHKBP1-227ENST00000602011 EPHB6O15197 1021 aa17.93■□□□□ 0.46
SHKBP1-227ENST00000602011 NVLO15381 856 aaKnown RBP17.93■□□□□ 0.46
SHKBP1-227ENST00000602011 INSIG1O15503 277 aa17.93■□□□□ 0.46
SHKBP1-227ENST00000602011 PALMO75781 387 aa17.93■□□□□ 0.46
SHKBP1-227ENST00000602011 ITIH2P19823 946 aa17.93■□□□□ 0.46
SHKBP1-227ENST00000602011 CDK11BP21127 795 aaKnown RBP17.93■□□□□ 0.46
SHKBP1-227ENST00000602011 MMP12P39900 470 aa17.93■□□□□ 0.46
SHKBP1-227ENST00000602011 INHBCP55103 352 aa17.93■□□□□ 0.46
SHKBP1-227ENST00000602011 KIAA1024LP59773 190 aa17.93■□□□□ 0.46
SHKBP1-227ENST00000602011 UBXN1Q04323 297 aa17.93■□□□□ 0.46
SHKBP1-227ENST00000602011 PEX6Q13608 980 aa17.93■□□□□ 0.46
SHKBP1-227ENST00000602011 CLPPQ16740 277 aaPredicted RBP17.93■□□□□ 0.46
SHKBP1-227ENST00000602011 LRRC73Q5JTD7 316 aa17.93■□□□□ 0.46
SHKBP1-227ENST00000602011 SRLQ86TD4 932 aa17.93■□□□□ 0.46
SHKBP1-227ENST00000602011 MCOLN2Q8IZK6 566 aa17.93■□□□□ 0.46
SHKBP1-227ENST00000602011 LZTR1Q8N653 840 aa17.93■□□□□ 0.46
SHKBP1-227ENST00000602011 GPR156Q8NFN8 814 aa17.93■□□□□ 0.46
SHKBP1-227ENST00000602011 PCDH19Q8TAB3 1148 aa17.93■□□□□ 0.46
SHKBP1-227ENST00000602011 SPOCK2Q92563 424 aa17.93■□□□□ 0.46
SHKBP1-227ENST00000602011 TSACCQ96A04 125 aaPredicted RBP17.93■□□□□ 0.46
SHKBP1-227ENST00000602011 MCEEQ96PE7 176 aa17.93■□□□□ 0.46
SHKBP1-227ENST00000602011 LRRN3Q9H3W5 708 aa17.93■□□□□ 0.46
SHKBP1-227ENST00000602011 ANO10Q9NW15 660 aa17.93■□□□□ 0.46
SHKBP1-227ENST00000602011 ATXN7L1Q9ULK2 861 aaPredicted RBP17.93■□□□□ 0.46
SHKBP1-227ENST00000602011 B8ZZF3 427 aa17.92■□□□□ 0.46
SHKBP1-227ENST00000602011 D6RAR5 112 aa17.92■□□□□ 0.46
SHKBP1-227ENST00000602011 DAPK3O43293 454 aa17.92■□□□□ 0.46
SHKBP1-227ENST00000602011 PIGNO95427 931 aa17.92■□□□□ 0.46
SHKBP1-227ENST00000602011 TRIM23P36406 574 aa17.92■□□□□ 0.46
SHKBP1-227ENST00000602011 HCAR3P49019 387 aa17.92■□□□□ 0.46
SHKBP1-227ENST00000602011 RPL7AP62424 266 aaKnown RBP17.92■□□□□ 0.46
SHKBP1-227ENST00000602011 BCL2L1Q07817 233 aa17.92■□□□□ 0.46
SHKBP1-227ENST00000602011 CLN3Q13286 438 aa17.92■□□□□ 0.46
SHKBP1-227ENST00000602011 ERMARDQ5T6L9 678 aa17.92■□□□□ 0.46
SHKBP1-227ENST00000602011 AFMIDQ63HM1 303 aa17.92■□□□□ 0.46
SHKBP1-227ENST00000602011 RBM43Q6ZSC3 357 aaKnown RBP17.92■□□□□ 0.46
SHKBP1-227ENST00000602011 RD3Q7Z3Z2 195 aa17.92■□□□□ 0.46
SHKBP1-227ENST00000602011 OR56A4Q8NGH8 313 aa17.92■□□□□ 0.46
SHKBP1-227ENST00000602011 CCDC74AQ96AQ1 378 aa17.92■□□□□ 0.46
SHKBP1-227ENST00000602011 ECHDC3Q96DC8 303 aa17.92■□□□□ 0.46
SHKBP1-227ENST00000602011 SEPT10Q9P0V9 454 aa17.92■□□□□ 0.46
SHKBP1-227ENST00000602011 HECTD1Q9ULT8 2610 aa17.91■□□□□ 0.46
SHKBP1-227ENST00000602011 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.91■□□□□ 0.46
SHKBP1-227ENST00000602011 J3KR12 359 aa17.91■□□□□ 0.46
SHKBP1-227ENST00000602011 EEF2KO00418 725 aaKnown RBP17.91■□□□□ 0.46
SHKBP1-227ENST00000602011 BUB1BO60566 1050 aaPredicted RBP17.91■□□□□ 0.46
SHKBP1-227ENST00000602011 RNF8O76064 485 aa17.91■□□□□ 0.46
SHKBP1-227ENST00000602011 TNFAIP3P21580 790 aa17.91■□□□□ 0.46
SHKBP1-227ENST00000602011 UGT1A5P35504 534 aa17.91■□□□□ 0.46
SHKBP1-227ENST00000602011 PAPOLAP51003 745 aaKnown RBP17.91■□□□□ 0.46
SHKBP1-227ENST00000602011 PDX1P52945 283 aa17.91■□□□□ 0.46
SHKBP1-227ENST00000602011 AP1S1P61966 158 aa17.91■□□□□ 0.46
SHKBP1-227ENST00000602011 CCL7P80098 99 aa17.91■□□□□ 0.46
SHKBP1-227ENST00000602011 MYL5Q02045 173 aa17.91■□□□□ 0.46
SHKBP1-227ENST00000602011 IL10RBQ08334 325 aa17.91■□□□□ 0.46
SHKBP1-227ENST00000602011 SASS6Q6UVJ0 657 aa17.91■□□□□ 0.46
SHKBP1-227ENST00000602011 CAMK1DQ8IU85 385 aa17.91■□□□□ 0.46
SHKBP1-227ENST00000602011 KYQ8NBH2 561 aa17.91■□□□□ 0.46
SHKBP1-227ENST00000602011 FNIP1Q8TF40 1166 aa17.91■□□□□ 0.46
SHKBP1-227ENST00000602011 EXOC2Q96KP1 924 aa17.91■□□□□ 0.46
SHKBP1-227ENST00000602011 ZNF599Q96NL3 588 aa17.91■□□□□ 0.46
SHKBP1-227ENST00000602011 CINPQ9BW66 212 aaPredicted RBP17.91■□□□□ 0.46
SHKBP1-227ENST00000602011 SYNDIG1Q9H7V2 258 aa17.91■□□□□ 0.46
SHKBP1-227ENST00000602011 AKAP7Q9P0M2 348 aaPredicted RBP17.91■□□□□ 0.46
SHKBP1-227ENST00000602011 AP4E1Q9UPM8 1137 aa17.91■□□□□ 0.46
SHKBP1-227ENST00000602011 COQ6Q9Y2Z9 468 aa17.91■□□□□ 0.46
SHKBP1-227ENST00000602011 OR1A2Q9Y585 309 aa17.91■□□□□ 0.46
SHKBP1-227ENST00000602011 NUDT21O43809 227 aaKnown RBP17.9■□□□□ 0.46
SHKBP1-227ENST00000602011 RECQL5O94762 991 aaPredicted RBP17.9■□□□□ 0.46
SHKBP1-227ENST00000602011 RPLP0P05388 317 aaKnown RBP17.9■□□□□ 0.46
SHKBP1-227ENST00000602011 ELFN1P0C7U0 828 aa17.9■□□□□ 0.46
SHKBP1-227ENST00000602011 JMJD7P0C870 316 aa17.9■□□□□ 0.46
SHKBP1-227ENST00000602011 SFTPCP11686 197 aa17.9■□□□□ 0.46
SHKBP1-227ENST00000602011 ATP1A3P13637 1013 aa17.9■□□□□ 0.46
SHKBP1-227ENST00000602011 CD82P27701 267 aa17.9■□□□□ 0.46
SHKBP1-227ENST00000602011 HSPA9P38646 679 aaKnown RBP17.9■□□□□ 0.46
SHKBP1-227ENST00000602011 ZFP36L1Q07352 338 aaKnown RBP17.9■□□□□ 0.46
SHKBP1-227ENST00000602011 MAMLD1Q13495 774 aa17.9■□□□□ 0.46
SHKBP1-227ENST00000602011 ARHGEF7Q14155 803 aa17.9■□□□□ 0.46
SHKBP1-227ENST00000602011 CERCAMQ5T4B2 595 aa17.9■□□□□ 0.46
SHKBP1-227ENST00000602011 LIPIQ6XZB0 460 aa17.9■□□□□ 0.46
SHKBP1-227ENST00000602011 TAF8Q7Z7C8 310 aa17.9■□□□□ 0.46
SHKBP1-227ENST00000602011 PAF1Q8N7H5 531 aa17.9■□□□□ 0.46
SHKBP1-227ENST00000602011 FAM46DQ8NEK8 389 aa17.9■□□□□ 0.46
SHKBP1-227ENST00000602011 KIAA1524Q8TCG1 905 aa17.9■□□□□ 0.46
SHKBP1-227ENST00000602011 PSKH2Q96QS6 385 aa17.9■□□□□ 0.46
SHKBP1-227ENST00000602011 CMKLR1Q99788 373 aa17.9■□□□□ 0.46
SHKBP1-227ENST00000602011 SLC39A8Q9C0K1 460 aa17.9■□□□□ 0.46
SHKBP1-227ENST00000602011 EPB41L5Q9HCM4 733 aa17.9■□□□□ 0.46
SHKBP1-227ENST00000602011 WDR70Q9NW82 654 aa17.9■□□□□ 0.46
SHKBP1-227ENST00000602011 SIRPGQ9P1W8 387 aa17.9■□□□□ 0.46
SHKBP1-227ENST00000602011 SEPT3Q9UH03 358 aa17.9■□□□□ 0.46
SHKBP1-227ENST00000602011 AHCTF1Q8WYP5 2266 aa17.89■□□□□ 0.46
SHKBP1-227ENST00000602011 A0A1W2PQM1 296 aa17.89■□□□□ 0.45
SHKBP1-227ENST00000602011 ITGB2P05107 769 aa17.89■□□□□ 0.45
SHKBP1-227ENST00000602011 PCCBP05166 539 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms