RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 IL21RQ9HBE5 538 aa16.29■□□□□ 0.2
LSM4-206ENST00000600289 NOD2Q9HC29 1040 aa16.29■□□□□ 0.2
LSM4-206ENST00000600289 NT5MQ9NPB1 228 aa16.29■□□□□ 0.2
LSM4-206ENST00000600289 PCDH12Q9NPG4 1184 aa16.29■□□□□ 0.2
LSM4-206ENST00000600289 EFR3BQ9Y2G0 817 aa16.29■□□□□ 0.2
LSM4-206ENST00000600289 HEY1Q9Y5J3 304 aa16.29■□□□□ 0.2
LSM4-206ENST00000600289 IGLON5A6NGN9 336 aa16.28■□□□□ 0.2
LSM4-206ENST00000600289 A6NNZ2 444 aa16.28■□□□□ 0.2
LSM4-206ENST00000600289 H0Y8X5 98 aa16.28■□□□□ 0.2
LSM4-206ENST00000600289 TOR1BO14657 336 aa16.28■□□□□ 0.2
LSM4-206ENST00000600289 TM7SF2O76062 418 aa16.28■□□□□ 0.2
LSM4-206ENST00000600289 RXRGP48443 463 aa16.28■□□□□ 0.2
LSM4-206ENST00000600289 MAXP61244 160 aa16.28■□□□□ 0.2
LSM4-206ENST00000600289 SGCGQ13326 291 aa16.28■□□□□ 0.2
LSM4-206ENST00000600289 LRRC73Q5JTD7 316 aa16.28■□□□□ 0.2
LSM4-206ENST00000600289 DPPA4Q7L190 304 aa16.28■□□□□ 0.2
LSM4-206ENST00000600289 SPATS2Q86XZ4 545 aaKnown RBP16.28■□□□□ 0.2
LSM4-206ENST00000600289 DCP2Q8IU60 420 aaKnown RBP16.28■□□□□ 0.2
LSM4-206ENST00000600289 SYCE1Q8N0S2 351 aa16.28■□□□□ 0.2
LSM4-206ENST00000600289 RNF10Q8N5U6 811 aaKnown RBP16.28■□□□□ 0.2
LSM4-206ENST00000600289 UBE2Q2Q8WVN8 375 aa16.28■□□□□ 0.2
LSM4-206ENST00000600289 KLK6Q92876 244 aa16.28■□□□□ 0.2
LSM4-206ENST00000600289 KLHDC7BQ96G42 594 aa16.28■□□□□ 0.2
LSM4-206ENST00000600289 LGMNQ99538 433 aa16.28■□□□□ 0.2
LSM4-206ENST00000600289 C1QTNF7Q9BXJ2 289 aa16.28■□□□□ 0.2
LSM4-206ENST00000600289 SLC32A1Q9H598 525 aa16.28■□□□□ 0.2
LSM4-206ENST00000600289 RBM22Q9NW64 420 aaKnown RBP eCLIP16.28■□□□□ 0.2
LSM4-206ENST00000600289 PPIL1Q9Y3C6 166 aa16.28■□□□□ 0.2
LSM4-206ENST00000600289 ADGRG1Q9Y653 693 aa16.28■□□□□ 0.2
LSM4-206ENST00000600289 APC2O95996 2303 aa16.27■□□□□ 0.2
LSM4-206ENST00000600289 FLRT2O43155 660 aa16.27■□□□□ 0.2
LSM4-206ENST00000600289 FZD6O60353 706 aa16.27■□□□□ 0.2
LSM4-206ENST00000600289 CST8O60676 142 aa16.27■□□□□ 0.2
LSM4-206ENST00000600289 PAK4O96013 591 aaPredicted RBP16.27■□□□□ 0.2
LSM4-206ENST00000600289 CPP00450 1065 aa16.27■□□□□ 0.2
LSM4-206ENST00000600289 HLA-DQB2P05538 268 aa16.27■□□□□ 0.2
LSM4-206ENST00000600289 THEGLP0DJG4 465 aa16.27■□□□□ 0.2
LSM4-206ENST00000600289 ITIH2P19823 946 aa16.27■□□□□ 0.2
LSM4-206ENST00000600289 NFKBIAP25963 317 aa16.27■□□□□ 0.2
LSM4-206ENST00000600289 PEX5P50542 639 aa16.27■□□□□ 0.2
LSM4-206ENST00000600289 NAP1L1P55209 391 aaKnown RBP16.27■□□□□ 0.2
LSM4-206ENST00000600289 TRAF2Q12933 501 aa16.27■□□□□ 0.2
LSM4-206ENST00000600289 RALGDSQ12967 914 aa16.27■□□□□ 0.2
LSM4-206ENST00000600289 SUZ12Q15022 739 aaKnown RBP16.27■□□□□ 0.2
LSM4-206ENST00000600289 PRKD1Q15139 912 aaPredicted RBP16.27■□□□□ 0.2
LSM4-206ENST00000600289 BBS12Q6ZW61 710 aa16.27■□□□□ 0.2
LSM4-206ENST00000600289 NT5DC3Q86UY8 548 aa16.27■□□□□ 0.2
LSM4-206ENST00000600289 NAXDQ8IW45 347 aa16.27■□□□□ 0.2
LSM4-206ENST00000600289 CCNYQ8ND76 341 aa16.27■□□□□ 0.2
LSM4-206ENST00000600289 BAHD1Q8TBE0 780 aaPredicted RBP16.27■□□□□ 0.2
LSM4-206ENST00000600289 ARRDC2Q8TBH0 407 aa16.27■□□□□ 0.2
LSM4-206ENST00000600289 CENPTQ96BT3 561 aa16.27■□□□□ 0.2
LSM4-206ENST00000600289 IFT43Q96FT9 208 aa16.27■□□□□ 0.2
LSM4-206ENST00000600289 BMFQ96LC9 184 aa16.27■□□□□ 0.2
LSM4-206ENST00000600289 SEMA3CQ99985 751 aa16.27■□□□□ 0.2
LSM4-206ENST00000600289 TSGA10Q9BZW7 698 aa16.27■□□□□ 0.2
LSM4-206ENST00000600289 GRPEL1Q9HAV7 217 aa16.27■□□□□ 0.2
LSM4-206ENST00000600289 FZD3Q9NPG1 666 aa16.27■□□□□ 0.2
LSM4-206ENST00000600289 PHTF1Q9UMS5 762 aa16.27■□□□□ 0.2
LSM4-206ENST00000600289 PCDHGC4Q9Y5F7 938 aa16.27■□□□□ 0.2
LSM4-206ENST00000600289 CFAP46Q8IYW2 2715 aa16.26■□□□□ 0.19
LSM4-206ENST00000600289 TTC24A2A3L6 582 aaPredicted RBP16.26■□□□□ 0.19
LSM4-206ENST00000600289 MIF4GDA9UHW6 222 aaKnown RBP16.26■□□□□ 0.19
LSM4-206ENST00000600289 FPGTO14772 594 aa16.26■□□□□ 0.19
LSM4-206ENST00000600289 RAD51BO15315 384 aa16.26■□□□□ 0.19
LSM4-206ENST00000600289 MMP20O60882 483 aa16.26■□□□□ 0.19
LSM4-206ENST00000600289 CBFA2T3O75081 653 aa16.26■□□□□ 0.19
LSM4-206ENST00000600289 PGLSO95336 258 aa16.26■□□□□ 0.19
LSM4-206ENST00000600289 KRT10P13645 584 aa16.26■□□□□ 0.19
LSM4-206ENST00000600289 C6P13671 934 aa16.26■□□□□ 0.19
LSM4-206ENST00000600289 RABIFP47224 123 aa16.26■□□□□ 0.19
LSM4-206ENST00000600289 ARRB1P49407 418 aaPredicted RBP16.26■□□□□ 0.19
LSM4-206ENST00000600289 PFN3P60673 137 aa16.26■□□□□ 0.19
LSM4-206ENST00000600289 SHBQ15464 509 aa16.26■□□□□ 0.19
LSM4-206ENST00000600289 NPNTQ6UXI9 565 aa16.26■□□□□ 0.19
LSM4-206ENST00000600289 ZNF662Q6ZS27 426 aa16.26■□□□□ 0.19
LSM4-206ENST00000600289 LRRC8AQ8IWT6 810 aa16.26■□□□□ 0.19
LSM4-206ENST00000600289 SLC22A18ASQ8N1D0 253 aa16.26■□□□□ 0.19
LSM4-206ENST00000600289 TP53I13Q8NBR0 393 aaPredicted RBP16.26■□□□□ 0.19
LSM4-206ENST00000600289 OR13H1Q8NG92 308 aa16.26■□□□□ 0.19
LSM4-206ENST00000600289 MCCC1Q96RQ3 725 aaPredicted RBP16.26■□□□□ 0.19
LSM4-206ENST00000600289 WRAP53Q9BUR4 548 aaKnown RBP16.26■□□□□ 0.19
LSM4-206ENST00000600289 TDRD1Q9BXT4 1180 aaKnown RBP16.26■□□□□ 0.19
LSM4-206ENST00000600289 CA5BQ9Y2D0 317 aa16.26■□□□□ 0.19
LSM4-206ENST00000600289 PTPRBP23467 1997 aa16.26■□□□□ 0.19
LSM4-206ENST00000600289 MACROD2A1Z1Q3 448 aa16.25■□□□□ 0.19
LSM4-206ENST00000600289 POM121BA6NF01 834 aa16.25■□□□□ 0.19
LSM4-206ENST00000600289 APOC4-APOC2K7ER74 178 aa16.25■□□□□ 0.19
LSM4-206ENST00000600289 KCNK1O00180 336 aa16.25■□□□□ 0.19
LSM4-206ENST00000600289 APOC2P02655 101 aa16.25■□□□□ 0.19
LSM4-206ENST00000600289 PECAM1P16284 738 aaPredicted RBP16.25■□□□□ 0.19
LSM4-206ENST00000600289 CA4P22748 312 aa16.25■□□□□ 0.19
LSM4-206ENST00000600289 EPHA8P29322 1005 aaPredicted RBP16.25■□□□□ 0.19
LSM4-206ENST00000600289 LIG3P49916 1009 aa16.25■□□□□ 0.19
LSM4-206ENST00000600289 RWDD2BP57060 319 aa16.25■□□□□ 0.19
LSM4-206ENST00000600289 CLDN2P57739 230 aa16.25■□□□□ 0.19
LSM4-206ENST00000600289 RPL26P61254 145 aaKnown RBP16.25■□□□□ 0.19
LSM4-206ENST00000600289 YPEL5P62699 121 aa16.25■□□□□ 0.19
LSM4-206ENST00000600289 DYNLT1P63172 113 aa16.25■□□□□ 0.19
LSM4-206ENST00000600289 ADCY2Q08462 1091 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms