RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 DESP17661 470 aa17.29■□□□□ 0.36
SMG9-210ENST00000600097 CSNK1DP48730 415 aa17.29■□□□□ 0.36
SMG9-210ENST00000600097 NDST2P52849 883 aa17.29■□□□□ 0.36
SMG9-210ENST00000600097 KIAA1024LP59773 190 aa17.29■□□□□ 0.36
SMG9-210ENST00000600097 ZFP36L1Q07352 338 aaKnown RBP17.29■□□□□ 0.36
SMG9-210ENST00000600097 SYCP1Q15431 976 aa17.29■□□□□ 0.36
SMG9-210ENST00000600097 CLEC16AQ2KHT3 1053 aa17.29■□□□□ 0.36
SMG9-210ENST00000600097 FKBP15Q5T1M5 1219 aa17.29■□□□□ 0.36
SMG9-210ENST00000600097 CERCAMQ5T4B2 595 aa17.29■□□□□ 0.36
SMG9-210ENST00000600097 TAF8Q7Z7C8 310 aa17.29■□□□□ 0.36
SMG9-210ENST00000600097 FAM46DQ8NEK8 389 aa17.29■□□□□ 0.36
SMG9-210ENST00000600097 OR56A4Q8NGH8 313 aa17.29■□□□□ 0.36
SMG9-210ENST00000600097 CMKLR1Q99788 373 aa17.29■□□□□ 0.36
SMG9-210ENST00000600097 ARHGAP9Q9BRR9 750 aa17.29■□□□□ 0.36
SMG9-210ENST00000600097 FAM117AQ9C073 453 aa17.29■□□□□ 0.36
SMG9-210ENST00000600097 VPS16Q9H269 839 aa17.29■□□□□ 0.36
SMG9-210ENST00000600097 ATP13A3Q9H7F0 1226 aa17.29■□□□□ 0.36
SMG9-210ENST00000600097 PDFQ9HBH1 243 aa17.29■□□□□ 0.36
SMG9-210ENST00000600097 HEMK1Q9Y5R4 338 aaPredicted RBP17.29■□□□□ 0.36
SMG9-210ENST00000600097 TNFRSF10CO14798 259 aa17.28■□□□□ 0.36
SMG9-210ENST00000600097 BUB1BO60566 1050 aaPredicted RBP17.28■□□□□ 0.36
SMG9-210ENST00000600097 PRAMEF11O60813 436 aa17.28■□□□□ 0.36
SMG9-210ENST00000600097 HOXC4P09017 264 aaPredicted RBP17.28■□□□□ 0.36
SMG9-210ENST00000600097 SERPINA4P29622 427 aa17.28■□□□□ 0.36
SMG9-210ENST00000600097 KLK7P49862 253 aa17.28■□□□□ 0.36
SMG9-210ENST00000600097 TGIF1Q15583 401 aa17.28■□□□□ 0.36
SMG9-210ENST00000600097 C14orf28Q4W4Y0 310 aa17.28■□□□□ 0.36
SMG9-210ENST00000600097 DNAJC24Q6P3W2 148 aa17.28■□□□□ 0.36
SMG9-210ENST00000600097 PRICKLE2Q7Z3G6 844 aa17.28■□□□□ 0.36
SMG9-210ENST00000600097 CAMK1DQ8IU85 385 aa17.28■□□□□ 0.36
SMG9-210ENST00000600097 Q8N9G6 341 aaPredicted RBP17.28■□□□□ 0.36
SMG9-210ENST00000600097 EXD3Q8N9H8 876 aa17.28■□□□□ 0.36
SMG9-210ENST00000600097 OR1E3Q8WZA6 343 aa17.28■□□□□ 0.36
SMG9-210ENST00000600097 CNPY3Q9BT09 278 aa17.28■□□□□ 0.36
SMG9-210ENST00000600097 LRRC19Q9H756 370 aa17.28■□□□□ 0.36
SMG9-210ENST00000600097 TMEM202A6NGA9 273 aa17.27■□□□□ 0.36
SMG9-210ENST00000600097 ARHGAP42A6NI28 874 aa17.27■□□□□ 0.36
SMG9-210ENST00000600097 J3KR12 359 aa17.27■□□□□ 0.36
SMG9-210ENST00000600097 EPHB6O15197 1021 aa17.27■□□□□ 0.36
SMG9-210ENST00000600097 NUDT21O43809 227 aaKnown RBP17.27■□□□□ 0.36
SMG9-210ENST00000600097 RECQL5O94762 991 aaPredicted RBP17.27■□□□□ 0.36
SMG9-210ENST00000600097 SFTPCP11686 197 aa17.27■□□□□ 0.36
SMG9-210ENST00000600097 TPI1P60174 286 aa17.27■□□□□ 0.36
SMG9-210ENST00000600097 POLR2LP62875 67 aaKnown RBP17.27■□□□□ 0.36
SMG9-210ENST00000600097 NFATC3Q12968 1075 aa17.27■□□□□ 0.36
SMG9-210ENST00000600097 ARHGEF7Q14155 803 aa17.27■□□□□ 0.36
SMG9-210ENST00000600097 KRT31Q15323 416 aa17.27■□□□□ 0.36
SMG9-210ENST00000600097 LINC00303Q3SY05 128 aa17.27■□□□□ 0.36
SMG9-210ENST00000600097 KCTD16Q68DU8 428 aa17.27■□□□□ 0.36
SMG9-210ENST00000600097 MON1BQ7L1V2 547 aa17.27■□□□□ 0.36
SMG9-210ENST00000600097 SPRED1Q7Z699 444 aa17.27■□□□□ 0.36
SMG9-210ENST00000600097 SRLQ86TD4 932 aa17.27■□□□□ 0.36
SMG9-210ENST00000600097 ZSWIM9Q86XI8 627 aa17.27■□□□□ 0.36
SMG9-210ENST00000600097 PLA2G15Q8NCC3 412 aa17.27■□□□□ 0.36
SMG9-210ENST00000600097 ENOX1Q8TC92 643 aaKnown RBP17.27■□□□□ 0.36
SMG9-210ENST00000600097 FUBP1Q96AE4 644 aaKnown RBP17.27■□□□□ 0.36
SMG9-210ENST00000600097 MCEEQ96PE7 176 aa17.27■□□□□ 0.36
SMG9-210ENST00000600097 NUP62CLQ9H1M0 184 aa17.27■□□□□ 0.36
SMG9-210ENST00000600097 FGF22Q9HCT0 170 aa17.27■□□□□ 0.36
SMG9-210ENST00000600097 LRIT1Q9P2V4 623 aa17.27■□□□□ 0.36
SMG9-210ENST00000600097 PCDHB11Q9Y5F2 797 aa17.27■□□□□ 0.36
SMG9-210ENST00000600097 TCRBV5S1A1TA0A578 114 aa17.26■□□□□ 0.35
SMG9-210ENST00000600097 EIF3CLB5ME19 914 aaKnown RBP17.26■□□□□ 0.35
SMG9-210ENST00000600097 PDE2AO00408 941 aaPredicted RBP17.26■□□□□ 0.35
SMG9-210ENST00000600097 PALMO75781 387 aa17.26■□□□□ 0.35
SMG9-210ENST00000600097 ELFN1P0C7U0 828 aa17.26■□□□□ 0.35
SMG9-210ENST00000600097 CD82P27701 267 aa17.26■□□□□ 0.35
SMG9-210ENST00000600097 TRIM23P36406 574 aa17.26■□□□□ 0.35
SMG9-210ENST00000600097 CSRP3P50461 194 aa17.26■□□□□ 0.35
SMG9-210ENST00000600097 RPL7AP62424 266 aaKnown RBP17.26■□□□□ 0.35
SMG9-210ENST00000600097 HLTFQ14527 1009 aaKnown RBP eCLIP17.26■□□□□ 0.35
SMG9-210ENST00000600097 TSR1Q2NL82 804 aaKnown RBP17.26■□□□□ 0.35
SMG9-210ENST00000600097 MANEAQ5SRI9 462 aa17.26■□□□□ 0.35
SMG9-210ENST00000600097 CDKAL1Q5VV42 579 aa17.26■□□□□ 0.35
SMG9-210ENST00000600097 DCUN1D2Q6PH85 259 aa17.26■□□□□ 0.35
SMG9-210ENST00000600097 LIPIQ6XZB0 460 aa17.26■□□□□ 0.35
SMG9-210ENST00000600097 NYAP1Q6ZVC0 841 aa17.26■□□□□ 0.35
SMG9-210ENST00000600097 PAF1Q8N7H5 531 aa17.26■□□□□ 0.35
SMG9-210ENST00000600097 ZSCAN1Q8NBB4 408 aa17.26■□□□□ 0.35
SMG9-210ENST00000600097 KIAA1524Q8TCG1 905 aa17.26■□□□□ 0.35
SMG9-210ENST00000600097 ECHDC3Q96DC8 303 aa17.26■□□□□ 0.35
SMG9-210ENST00000600097 EIF3CQ99613 913 aaKnown RBP17.26■□□□□ 0.35
SMG9-210ENST00000600097 B3GNT4Q9C0J1 378 aa17.26■□□□□ 0.35
SMG9-210ENST00000600097 DPEP2Q9H4A9 486 aa17.26■□□□□ 0.35
SMG9-210ENST00000600097 SEPT11Q9NVA2 429 aaKnown RBP17.26■□□□□ 0.35
SMG9-210ENST00000600097 AKAP7Q9P0M2 348 aaPredicted RBP17.26■□□□□ 0.35
SMG9-210ENST00000600097 SIK3Q9Y2K2 1263 aa17.26■□□□□ 0.35
SMG9-210ENST00000600097 RNF215Q9Y6U7 377 aa17.26■□□□□ 0.35
SMG9-210ENST00000600097 PRAMEF33A0A0G2JMD5 474 aa17.25■□□□□ 0.35
SMG9-210ENST00000600097 A0A1W2PQC6 194 aa17.25■□□□□ 0.35
SMG9-210ENST00000600097 B4DGG1 531 aa17.25■□□□□ 0.35
SMG9-210ENST00000600097 PYCARD-AS1I3L0S3 204 aa17.25■□□□□ 0.35
SMG9-210ENST00000600097 PRAMEF10O60809 474 aa17.25■□□□□ 0.35
SMG9-210ENST00000600097 PRKCGP05129 697 aa17.25■□□□□ 0.35
SMG9-210ENST00000600097 KRT10P13645 584 aa17.25■□□□□ 0.35
SMG9-210ENST00000600097 ITIH1P19827 911 aa17.25■□□□□ 0.35
SMG9-210ENST00000600097 PAPOLAP51003 745 aaKnown RBP17.25■□□□□ 0.35
SMG9-210ENST00000600097 BCL2L1Q07817 233 aa17.25■□□□□ 0.35
SMG9-210ENST00000600097 NSUN2Q08J23 767 aaKnown RBP eCLIP17.25■□□□□ 0.35
SMG9-210ENST00000600097 RALGDSQ12967 914 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms