RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 SNX25Q9H3E2 840 aa19.41■□□□□ 0.7
ARHGEF1-218ENST00000599589 FBRSL1Q9HCM7 1045 aaKnown RBP19.41■□□□□ 0.7
ARHGEF1-218ENST00000599589 CD320Q9NPF0 282 aa19.41■□□□□ 0.7
ARHGEF1-218ENST00000599589 TMEM9Q9P0T7 183 aa19.41■□□□□ 0.7
ARHGEF1-218ENST00000599589 TMED5Q9Y3A6 229 aa19.41■□□□□ 0.7
ARHGEF1-218ENST00000599589 MTF2Q9Y483 593 aaPredicted RBP19.41■□□□□ 0.7
ARHGEF1-218ENST00000599589 SHROOM3Q8TF72 1996 aa19.41■□□□□ 0.7
ARHGEF1-218ENST00000599589 FAM95CA0A1B0GW59 222 aa19.41■□□□□ 0.7
ARHGEF1-218ENST00000599589 ATP6AP2A0A1C7CYW4 349 aa19.41■□□□□ 0.7
ARHGEF1-218ENST00000599589 IQCA1LA6NCM1 817 aa19.41■□□□□ 0.7
ARHGEF1-218ENST00000599589 ATP6AP2O75787 350 aa19.41■□□□□ 0.7
ARHGEF1-218ENST00000599589 KCNH1O95259 989 aa19.41■□□□□ 0.7
ARHGEF1-218ENST00000599589 STMN1P16949 149 aa19.41■□□□□ 0.7
ARHGEF1-218ENST00000599589 CAPGP40121 348 aa19.41■□□□□ 0.7
ARHGEF1-218ENST00000599589 MLLT10P55197 1068 aa19.41■□□□□ 0.7
ARHGEF1-218ENST00000599589 ZNF792Q3KQV3 632 aa19.41■□□□□ 0.7
ARHGEF1-218ENST00000599589 IGFN1Q86VF2 1251 aa19.41■□□□□ 0.7
ARHGEF1-218ENST00000599589 CENPNQ96H22 339 aaPredicted RBP19.41■□□□□ 0.7
ARHGEF1-218ENST00000599589 C1orf50Q9BV19 199 aa19.41■□□□□ 0.7
ARHGEF1-218ENST00000599589 RIC8BQ9NVN3 520 aa19.41■□□□□ 0.7
ARHGEF1-218ENST00000599589 HACD3Q9P035 362 aa19.41■□□□□ 0.7
ARHGEF1-218ENST00000599589 KIAA1522Q9P206 1035 aaPredicted RBP19.41■□□□□ 0.7
ARHGEF1-218ENST00000599589 RBM47A0AV96 593 aaKnown RBP19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 EEF2KO00418 725 aaKnown RBP19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 NFKB1P19838 968 aa19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 KCNA5P22460 613 aa19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 GRSF1Q12849 480 aaKnown RBP eCLIP19.4■□□□□ 0.71e-6■□□□□ 8.3
ARHGEF1-218ENST00000599589 AMHR2Q16671 573 aa19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 CYBRD1Q53TN4 286 aa19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 ZNF362Q5T0B9 420 aaPredicted RBP19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 SPRED1Q7Z699 444 aa19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 CUZD1Q86UP6 607 aa19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 PIGZQ86VD9 579 aa19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 FUNDC1Q8IVP5 155 aa19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 COLGALT2Q8IYK4 626 aa19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 OR13F1Q8NGS4 319 aa19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 FAM149B1Q96BN6 582 aa19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 SEZ6LQ9BYH1 1024 aa19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 FANCEQ9HB96 536 aa19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 MRGBPQ9NV56 204 aa19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 TBC1D13Q9NVG8 400 aa19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 NSMCE4AQ9NXX6 385 aa19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 UNCXA6NJT0 531 aa19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 AQP12BA6NM10 295 aa19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 PPEF2O14830 753 aa19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 C22orf31O95567 290 aa19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 ATP5F1P24539 256 aaPredicted RBP19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 POU5F1BQ06416 359 aa19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 TRIM16LQ309B1 348 aa19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 ZNF280DQ6N043 979 aa19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 TAPT1Q6NXT6 567 aa19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 AQP12AQ8IXF9 295 aa19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 OR6B3Q8NGW1 331 aa19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 HDAC10Q969S8 669 aa19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 TAMM41Q96BW9 452 aa19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 FAR2Q96K12 515 aa19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 MRPL57Q9BQC6 102 aaKnown RBP19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 TDRD1Q9BXT4 1180 aaKnown RBP19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 NFKBIZQ9BYH8 718 aa19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 VTA1Q9NP79 307 aa19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 PKD2L2Q9NZM6 624 aa19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 IFT80Q9P2H3 777 aaPredicted RBP19.4■□□□□ 0.7
ARHGEF1-218ENST00000599589 DCLK1O15075 740 aa19.39■□□□□ 0.7
ARHGEF1-218ENST00000599589 MATKP42679 507 aa19.39■□□□□ 0.7
ARHGEF1-218ENST00000599589 GJA8P48165 433 aa19.39■□□□□ 0.7
ARHGEF1-218ENST00000599589 CD151P48509 253 aa19.39■□□□□ 0.7
ARHGEF1-218ENST00000599589 KPNA1P52294 538 aaPredicted RBP19.39■□□□□ 0.7
ARHGEF1-218ENST00000599589 RPS3AP61247 264 aaKnown RBP19.39■□□□□ 0.7
ARHGEF1-218ENST00000599589 ATP6V0D1P61421 351 aa19.39■□□□□ 0.7
ARHGEF1-218ENST00000599589 TNFAIP2Q03169 654 aa19.39■□□□□ 0.7
ARHGEF1-218ENST00000599589 DDIASQ8IXT1 998 aa19.39■□□□□ 0.7
ARHGEF1-218ENST00000599589 AFAP1L2Q8N4X5 818 aa19.39■□□□□ 0.7
ARHGEF1-218ENST00000599589 MAGEE2Q8TD90 523 aaPredicted RBP19.39■□□□□ 0.7
ARHGEF1-218ENST00000599589 KIF12Q96FN5 646 aa19.39■□□□□ 0.7
ARHGEF1-218ENST00000599589 ELMO2Q96JJ3 720 aa19.39■□□□□ 0.7
ARHGEF1-218ENST00000599589 SLC45A3Q96JT2 553 aa19.39■□□□□ 0.7
ARHGEF1-218ENST00000599589 TRIM15Q9C019 465 aa19.39■□□□□ 0.7
ARHGEF1-218ENST00000599589 GBA3Q9H227 469 aa19.39■□□□□ 0.7
ARHGEF1-218ENST00000599589 NANOGQ9H9S0 305 aa19.39■□□□□ 0.7
ARHGEF1-218ENST00000599589 SMPD3Q9NY59 655 aaPredicted RBP19.39■□□□□ 0.7
ARHGEF1-218ENST00000599589 MCM3APO60318 1980 aa19.39■□□□□ 0.7
ARHGEF1-218ENST00000599589 KRBA1A5PL33 1030 aa19.39■□□□□ 0.69
ARHGEF1-218ENST00000599589 PDHXO00330 501 aa19.39■□□□□ 0.69
ARHGEF1-218ENST00000599589 B4GAT1O43505 415 aa19.39■□□□□ 0.69
ARHGEF1-218ENST00000599589 SNAP29O95721 258 aa19.39■□□□□ 0.69
ARHGEF1-218ENST00000599589 INSRRP14616 1297 aa19.39■□□□□ 0.69
ARHGEF1-218ENST00000599589 PLK1P53350 603 aa19.39■□□□□ 0.69
ARHGEF1-218ENST00000599589 GJA9P57773 515 aa19.39■□□□□ 0.69
ARHGEF1-218ENST00000599589 DNAJB13P59910 316 aa19.39■□□□□ 0.69
ARHGEF1-218ENST00000599589 YBX1P67809 324 aaKnown RBP19.39■□□□□ 0.69
ARHGEF1-218ENST00000599589 IGBP1P78318 339 aa19.39■□□□□ 0.69
ARHGEF1-218ENST00000599589 PSMD5Q16401 504 aa19.39■□□□□ 0.69
ARHGEF1-218ENST00000599589 SLC25A52Q3SY17 297 aa19.39■□□□□ 0.69
ARHGEF1-218ENST00000599589 LDLRAP1Q5SW96 308 aa19.39■□□□□ 0.69
ARHGEF1-218ENST00000599589 TMTC4Q5T4D3 741 aa19.39■□□□□ 0.69
ARHGEF1-218ENST00000599589 RNF135Q8IUD6 432 aa19.39■□□□□ 0.69
ARHGEF1-218ENST00000599589 ROPN1LQ96C74 230 aa19.39■□□□□ 0.69
ARHGEF1-218ENST00000599589 FEM1CQ96JP0 617 aa19.39■□□□□ 0.69
ARHGEF1-218ENST00000599589 TUBA1CQ9BQE3 449 aa19.39■□□□□ 0.69
ARHGEF1-218ENST00000599589 RHOBTB2Q9BYZ6 727 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms