RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 CACNA2D2Q9NY47 1150 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 FAM53CQ9NYF3 392 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 EURLQ9NYK6 297 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 HACD3Q9P035 362 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 DKK3Q9UBP4 350 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 IL36AQ9UHA7 158 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 PHTF1Q9UMS5 762 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 DUSP12Q9UNI6 340 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 KCTD3Q9Y597 815 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 STON1Q9Y6Q2 735 aa14.81□□□□□ -0.04
SHKBP1-211ENST00000595945 CAPN8A6NHC0 703 aa14.8□□□□□ -0.04
SHKBP1-211ENST00000595945 ARCN1P48444 511 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-211ENST00000595945 ZNF140P52738 457 aaPredicted RBP14.8□□□□□ -0.04
SHKBP1-211ENST00000595945 FAM193AP78312 1265 aa14.8□□□□□ -0.04
SHKBP1-211ENST00000595945 IFFO1Q0D2I5 559 aa14.8□□□□□ -0.04
SHKBP1-211ENST00000595945 EFTUD2Q15029 972 aaKnown RBP eCLIP14.8□□□□□ -0.04
SHKBP1-211ENST00000595945 RASA2Q15283 850 aa14.8□□□□□ -0.04
SHKBP1-211ENST00000595945 TAF1AQ15573 450 aaPredicted RBP14.8□□□□□ -0.04
SHKBP1-211ENST00000595945 KBTBD12Q3ZCT8 623 aa14.8□□□□□ -0.04
SHKBP1-211ENST00000595945 SLC44A4Q53GD3 710 aa14.8□□□□□ -0.04
SHKBP1-211ENST00000595945 ARSIQ5FYB1 569 aa14.8□□□□□ -0.04
SHKBP1-211ENST00000595945 KIAA0930Q6ICG6 404 aaPredicted RBP14.8□□□□□ -0.04
SHKBP1-211ENST00000595945 ESRP1Q6NXG1 681 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-211ENST00000595945 BRAT1Q6PJG6 821 aa14.8□□□□□ -0.04
SHKBP1-211ENST00000595945 CROCCP2Q86T23 111 aa14.8□□□□□ -0.04
SHKBP1-211ENST00000595945 UNC5BQ8IZJ1 945 aa14.8□□□□□ -0.04
SHKBP1-211ENST00000595945 ZNF513Q8N8E2 541 aaPredicted RBP14.8□□□□□ -0.04
SHKBP1-211ENST00000595945 OR13J1Q8NGT2 312 aa14.8□□□□□ -0.04
SHKBP1-211ENST00000595945 GRIN3AQ8TCU5 1115 aa14.8□□□□□ -0.04
SHKBP1-211ENST00000595945 BLOC1S5Q8TDH9 187 aa14.8□□□□□ -0.04
SHKBP1-211ENST00000595945 EPS8L3Q8TE67 593 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-211ENST00000595945 OR8D1Q8WZ84 308 aa14.8□□□□□ -0.04
SHKBP1-211ENST00000595945 CERS2Q96G23 380 aa14.8□□□□□ -0.04
SHKBP1-211ENST00000595945 SRPK1Q96SB4 655 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-211ENST00000595945 PPCSQ9HAB8 311 aa14.8□□□□□ -0.04
SHKBP1-211ENST00000595945 TMBIM4Q9HC24 238 aa14.8□□□□□ -0.04
SHKBP1-211ENST00000595945 VPS18Q9P253 973 aa14.8□□□□□ -0.04
SHKBP1-211ENST00000595945 SLC2A6Q9UGQ3 507 aa14.8□□□□□ -0.04
SHKBP1-211ENST00000595945 SLC24A2Q9UI40 661 aa14.8□□□□□ -0.04
SHKBP1-211ENST00000595945 PPM1HQ9ULR3 514 aa14.8□□□□□ -0.04
SHKBP1-211ENST00000595945 ZNF711Q9Y462 761 aa14.8□□□□□ -0.04
SHKBP1-211ENST00000595945 EXOC1LA0A1B0GW35 172 aa14.79□□□□□ -0.04
SHKBP1-211ENST00000595945 CXorf49A8MYA2 514 aaPredicted RBP14.79□□□□□ -0.04
SHKBP1-211ENST00000595945 AURKAO14965 403 aa14.79□□□□□ -0.04
SHKBP1-211ENST00000595945 OPA1O60313 960 aa14.79□□□□□ -0.04
SHKBP1-211ENST00000595945 CRTAMO95727 393 aa14.79□□□□□ -0.04
SHKBP1-211ENST00000595945 SYF2O95926 243 aaKnown RBP14.79□□□□□ -0.04
SHKBP1-211ENST00000595945 PRNPP04156 253 aa14.79□□□□□ -0.04
SHKBP1-211ENST00000595945 EPHX1P07099 455 aa14.79□□□□□ -0.04
SHKBP1-211ENST00000595945 IVLP07476 585 aa14.79□□□□□ -0.04
SHKBP1-211ENST00000595945 CTPS1P17812 591 aa14.79□□□□□ -0.04
SHKBP1-211ENST00000595945 ARNTP27540 789 aa14.79□□□□□ -0.04
SHKBP1-211ENST00000595945 ABL2P42684 1182 aa14.79□□□□□ -0.04
SHKBP1-211ENST00000595945 EPHB1P54762 984 aa14.79□□□□□ -0.04
SHKBP1-211ENST00000595945 MGAT5Q09328 741 aa14.79□□□□□ -0.04
SHKBP1-211ENST00000595945 GRSF1Q12849 480 aaKnown RBP eCLIP14.79□□□□□ -0.04
SHKBP1-211ENST00000595945 NAB1Q13506 487 aa14.79□□□□□ -0.04
SHKBP1-211ENST00000595945 CAMK2GQ13555 558 aaPredicted RBP14.79□□□□□ -0.04
SHKBP1-211ENST00000595945 ELAVL3Q14576 367 aaKnown RBP14.79□□□□□ -0.04
SHKBP1-211ENST00000595945 PTPRRQ15256 657 aa14.79□□□□□ -0.04
SHKBP1-211ENST00000595945 CNGA3Q16281 694 aa14.79□□□□□ -0.04
SHKBP1-211ENST00000595945 LONRF1Q17RB8 773 aa14.79□□□□□ -0.04
SHKBP1-211ENST00000595945 KRT71Q3SY84 523 aa14.79□□□□□ -0.04
SHKBP1-211ENST00000595945 ZNF805Q5CZA5 627 aa14.79□□□□□ -0.04
SHKBP1-211ENST00000595945 UNC80Q8N2C7 3258 aa14.79□□□□□ -0.04
SHKBP1-211ENST00000595945 STYXQ8WUJ0 223 aa14.79□□□□□ -0.04
SHKBP1-211ENST00000595945 SCRN2Q96FV2 425 aa14.79□□□□□ -0.04
SHKBP1-211ENST00000595945 PKNOX2Q96KN3 472 aa14.79□□□□□ -0.04
SHKBP1-211ENST00000595945 RUFY1Q96T51 708 aa14.79□□□□□ -0.04
SHKBP1-211ENST00000595945 GABRG3Q99928 467 aa14.79□□□□□ -0.04
SHKBP1-211ENST00000595945 C19orf43Q9BQ61 176 aa14.79□□□□□ -0.04
SHKBP1-211ENST00000595945 TRABDQ9H4I3 376 aa14.79□□□□□ -0.04
SHKBP1-211ENST00000595945 ZDHHC4Q9NPG8 344 aa14.79□□□□□ -0.04
SHKBP1-211ENST00000595945 THEGQ9P2T0 379 aa14.79□□□□□ -0.04
SHKBP1-211ENST00000595945 LGALS13Q9UHV8 139 aa14.79□□□□□ -0.04
SHKBP1-211ENST00000595945 SARDHQ9UL12 918 aa14.79□□□□□ -0.04
SHKBP1-211ENST00000595945 PLXNB3Q9ULL4 1909 aa14.79□□□□□ -0.04
SHKBP1-211ENST00000595945 ARL5AQ9Y689 179 aa14.79□□□□□ -0.04
SHKBP1-211ENST00000595945 PLXNA2O75051 1894 aa14.78□□□□□ -0.04
SHKBP1-211ENST00000595945 CCDC78A2IDD5 438 aa14.78□□□□□ -0.04
SHKBP1-211ENST00000595945 RASGRF2O14827 1237 aa14.78□□□□□ -0.04
SHKBP1-211ENST00000595945 ALPIP09923 528 aa14.78□□□□□ -0.04
SHKBP1-211ENST00000595945 C7P10643 843 aa14.78□□□□□ -0.04
SHKBP1-211ENST00000595945 TIMP2P16035 220 aa14.78□□□□□ -0.04
SHKBP1-211ENST00000595945 TIE1P35590 1138 aa14.78□□□□□ -0.04
SHKBP1-211ENST00000595945 HNF1BP35680 557 aa14.78□□□□□ -0.04
SHKBP1-211ENST00000595945 SEC13P55735 322 aa14.78□□□□□ -0.04
SHKBP1-211ENST00000595945 MLF2Q15773 248 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-211ENST00000595945 TNFAIP8L3Q5GJ75 292 aa14.78□□□□□ -0.04
SHKBP1-211ENST00000595945 PDPK2PQ6A1A2 396 aa14.78□□□□□ -0.04
SHKBP1-211ENST00000595945 TPRG1Q6ZUI0 275 aa14.78□□□□□ -0.04
SHKBP1-211ENST00000595945 MARK2Q7KZI7 788 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-211ENST00000595945 GLT6D1Q7Z4J2 308 aa14.78□□□□□ -0.04
SHKBP1-211ENST00000595945 IL17RCQ8NAC3 791 aa14.78□□□□□ -0.04
SHKBP1-211ENST00000595945 PIP4K2CQ8TBX8 421 aa14.78□□□□□ -0.04
SHKBP1-211ENST00000595945 DCAKDQ8WVC6 231 aa14.78□□□□□ -0.04
SHKBP1-211ENST00000595945 SLC44A1Q8WWI5 657 aa14.78□□□□□ -0.04
SHKBP1-211ENST00000595945 FAM3CQ92520 227 aa14.78□□□□□ -0.04
SHKBP1-211ENST00000595945 ARRDC3Q96B67 414 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms