RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 HDAC11Q96DB2 347 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 C7orf26Q96N11 449 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 SH3GL1Q99961 368 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 NUF2Q9BZD4 464 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 UGT1A7Q9HAW7 530 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 UGT1A10Q9HAW8 530 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 UGT1A8Q9HAW9 530 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 CLK4Q9HAZ1 481 aaKnown RBP15.49■□□□□ 0.07
PNKP-204ENST00000594661 ALG13Q9NP73 1137 aaKnown RBP15.49■□□□□ 0.07
PNKP-204ENST00000594661 PIH1D1Q9NWS0 290 aaKnown RBP15.49■□□□□ 0.07
PNKP-204ENST00000594661 GID8Q9NWU2 228 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 GREB1Q4ZG55 1949 aa15.48■□□□□ 0.07
PNKP-204ENST00000594661 NUP205Q92621 2012 aa15.48■□□□□ 0.07
PNKP-204ENST00000594661 WDR27A2RRH5 827 aa15.48■□□□□ 0.07
PNKP-204ENST00000594661 MEI4A8MW99 385 aa15.48■□□□□ 0.07
PNKP-204ENST00000594661 NCAM2O15394 837 aa15.48■□□□□ 0.07
PNKP-204ENST00000594661 CLASP2O75122 1294 aaKnown RBP15.48■□□□□ 0.07
PNKP-204ENST00000594661 TBX18O95935 607 aa15.48■□□□□ 0.07
PNKP-204ENST00000594661 CSH1P0DML2 217 aa15.48■□□□□ 0.07
PNKP-204ENST00000594661 CSH2P0DML3 217 aa15.48■□□□□ 0.07
PNKP-204ENST00000594661 MLNP12872 115 aa15.48■□□□□ 0.07
PNKP-204ENST00000594661 GARSP41250 739 aaKnown RBP15.48■□□□□ 0.07
PNKP-204ENST00000594661 TUBA4AP68366 448 aa15.48■□□□□ 0.07
PNKP-204ENST00000594661 CRADDP78560 199 aa15.48■□□□□ 0.07
PNKP-204ENST00000594661 TAF10Q12962 218 aa15.48■□□□□ 0.07
PNKP-204ENST00000594661 RARS2Q5T160 578 aaKnown RBP15.48■□□□□ 0.07
PNKP-204ENST00000594661 GPR180Q86V85 440 aa15.48■□□□□ 0.07
PNKP-204ENST00000594661 FBXO22Q8NEZ5 403 aa15.48■□□□□ 0.07
PNKP-204ENST00000594661 FAM111AQ96PZ2 611 aa15.48■□□□□ 0.07
PNKP-204ENST00000594661 OLFM1Q99784 485 aa15.48■□□□□ 0.07
PNKP-204ENST00000594661 EIF2B3Q9NR50 452 aaKnown RBP15.48■□□□□ 0.07
PNKP-204ENST00000594661 HS3ST4Q9Y661 456 aa15.48■□□□□ 0.07
PNKP-204ENST00000594661 FAM159BA6NKW6 160 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 TNFRSF10AO00220 468 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 COPEO14579 308 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 KDM1AO60341 852 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 CAPNS1P04632 268 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 CLTBP09497 229 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 ATF6P18850 670 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 ITGB8P26012 769 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 HOXC13P31276 330 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 SESN2P58004 480 aaPredicted RBP15.47■□□□□ 0.07
PNKP-204ENST00000594661 SLC25A3Q00325 362 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 EFEMP1Q12805 493 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 BMPR2Q13873 1038 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 LRRC26Q2I0M4 334 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 FAM209AQ5JX71 171 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 ITPRIPL1Q6GPH6 555 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 PID1Q7Z2X4 250 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 C14orf80Q86SX3 495 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 TRIML2Q8N7C3 387 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 ADCY4Q8NFM4 1077 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 GIPC2Q8TF65 315 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 SLC39A13Q96H72 371 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 IGSF21Q96ID5 467 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 SPATA17Q96L03 361 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 CCDC68Q9H2F9 335 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.47■□□□□ 0.07
PNKP-204ENST00000594661 KLHL8Q9P2G9 620 aaPredicted RBP15.47■□□□□ 0.07
PNKP-204ENST00000594661 CDH22Q9UJ99 828 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 TLR6Q9Y2C9 796 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 SHROOM3Q8TF72 1996 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 SDR42E2A6NKP2 422 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 MX2P20592 715 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 SMARCB1Q12824 385 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 PSMD5Q16401 504 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 PIK3R6Q5UE93 754 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 FAM117BQ6P1L5 589 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 ARHGAP36Q6ZRI8 547 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 RAB3IL1Q8TBN0 382 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 TBC1D15Q8TC07 691 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 TTC17Q96AE7 1141 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 NDFIP2Q9NV92 336 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.47■□□□□ 0.07
PNKP-204ENST00000594661 MTRRQ9UBK8 725 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 KLHL3Q9UH77 587 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 B3GNT3Q9Y2A9 372 aa15.47■□□□□ 0.07
PNKP-204ENST00000594661 LTBP2Q14767 1821 aa15.46■□□□□ 0.07
PNKP-204ENST00000594661 E9PAM4 449 aa15.46■□□□□ 0.07
PNKP-204ENST00000594661 SIN3BO75182 1162 aa15.46■□□□□ 0.07
PNKP-204ENST00000594661 HSPA8P11142 646 aaKnown RBP15.46■□□□□ 0.07
PNKP-204ENST00000594661 MGAT1P26572 445 aa15.46■□□□□ 0.07
PNKP-204ENST00000594661 TBX4P57082 545 aa15.46■□□□□ 0.07
PNKP-204ENST00000594661 DEFB103AP81534 67 aa15.46■□□□□ 0.07
PNKP-204ENST00000594661 SLC8B1Q6J4K2 584 aa15.46■□□□□ 0.07
PNKP-204ENST00000594661 OGFOD2Q6N063 350 aa15.46■□□□□ 0.07
PNKP-204ENST00000594661 ARHGAP12Q8IWW6 846 aa15.46■□□□□ 0.07
PNKP-204ENST00000594661 DPF3Q92784 378 aa15.46■□□□□ 0.07
PNKP-204ENST00000594661 PAWRQ96IZ0 340 aaKnown RBP15.46■□□□□ 0.07
PNKP-204ENST00000594661 LAMA2P24043 3122 aaKnown RBP15.46■□□□□ 0.07
PNKP-204ENST00000594661 ZBTB24O43167 697 aaPredicted RBP15.46■□□□□ 0.06
PNKP-204ENST00000594661 STAMBPO95630 424 aa15.46■□□□□ 0.06
PNKP-204ENST00000594661 POLR2EP19388 210 aaKnown RBP15.46■□□□□ 0.06
PNKP-204ENST00000594661 ENDOUP21128 410 aaKnown RBP15.46■□□□□ 0.06
PNKP-204ENST00000594661 CD68P34810 354 aaPredicted RBP15.46■□□□□ 0.06
PNKP-204ENST00000594661 OR1D2P34982 312 aa15.46■□□□□ 0.06
PNKP-204ENST00000594661 CD300CQ08708 224 aa15.46■□□□□ 0.06
PNKP-204ENST00000594661 NSUN2Q08J23 767 aaKnown RBP eCLIP15.46■□□□□ 0.06
PNKP-204ENST00000594661 OLIG2Q13516 323 aa15.46■□□□□ 0.06
PNKP-204ENST00000594661 KCNJ8Q15842 424 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms