RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 SF3B5Q9BWJ5 86 aaKnown RBP5.15□□□□□ -1.59
SMAD4-216ENST00000593223 LMAN2LQ9H0V9 348 aa5.15□□□□□ -1.59
SMAD4-216ENST00000593223 EBF3Q9H4W6 596 aa5.15□□□□□ -1.59
SMAD4-216ENST00000593223 EPHX3Q9H6B9 360 aa5.15□□□□□ -1.59
SMAD4-216ENST00000593223 MRPL44Q9H9J2 332 aaKnown RBP5.15□□□□□ -1.59
SMAD4-216ENST00000593223 IFT80Q9P2H3 777 aaPredicted RBP5.15□□□□□ -1.59
SMAD4-216ENST00000593223 CLDN16Q9Y5I7 305 aa5.15□□□□□ -1.59
SMAD4-216ENST00000593223 INSL5Q9Y5Q6 135 aa5.15□□□□□ -1.59
SMAD4-216ENST00000593223 LAMC1P11047 1609 aa5.15□□□□□ -1.59
SMAD4-216ENST00000593223 CLIP1P30622 1438 aa5.14□□□□□ -1.59
SMAD4-216ENST00000593223 PTPRUQ92729 1446 aa5.14□□□□□ -1.59
SMAD4-216ENST00000593223 PDE4DIPQ5VU43 2346 aa5.14□□□□□ -1.59
SMAD4-216ENST00000593223 C1orf167Q5SNV9 1468 aa5.14□□□□□ -1.59
SMAD4-216ENST00000593223 TMCC2O75069 709 aa5.14□□□□□ -1.59
SMAD4-216ENST00000593223 AGR2O95994 175 aa5.14□□□□□ -1.59
SMAD4-216ENST00000593223 OAS2P29728 719 aaKnown RBP5.14□□□□□ -1.59
SMAD4-216ENST00000593223 PSMC2P35998 433 aaKnown RBP5.14□□□□□ -1.59
SMAD4-216ENST00000593223 GPD2P43304 727 aa5.14□□□□□ -1.59
SMAD4-216ENST00000593223 TDO2P48775 406 aa5.14□□□□□ -1.59
SMAD4-216ENST00000593223 ZNF131P52739 623 aa5.14□□□□□ -1.59
SMAD4-216ENST00000593223 KRT83P78385 493 aa5.14□□□□□ -1.59
SMAD4-216ENST00000593223 CCDC158Q5M9N0 1113 aa5.14□□□□□ -1.59
SMAD4-216ENST00000593223 NCAPH2Q6IBW4 605 aa5.14□□□□□ -1.59
SMAD4-216ENST00000593223 CPXM2Q8N436 756 aa5.14□□□□□ -1.59
SMAD4-216ENST00000593223 ARL6IP6Q8N6S5 226 aa5.14□□□□□ -1.59
SMAD4-216ENST00000593223 GDPD5Q8WTR4 605 aa5.14□□□□□ -1.59
SMAD4-216ENST00000593223 TBC1D22AQ8WUA7 517 aa5.14□□□□□ -1.59
SMAD4-216ENST00000593223 RUFY2Q8WXA3 655 aa5.14□□□□□ -1.59
SMAD4-216ENST00000593223 HVCN1Q96D96 273 aa5.14□□□□□ -1.59
SMAD4-216ENST00000593223 EYA3Q99504 573 aa5.14□□□□□ -1.59
SMAD4-216ENST00000593223 AP1M1Q9BXS5 423 aa5.14□□□□□ -1.59
SMAD4-216ENST00000593223 KLHL31Q9H511 634 aa5.14□□□□□ -1.59
SMAD4-216ENST00000593223 HIF1ANQ9NWT6 349 aa5.14□□□□□ -1.59
SMAD4-216ENST00000593223 TMEM160Q9NX00 188 aa5.14□□□□□ -1.59
SMAD4-216ENST00000593223 GGA3Q9NZ52 723 aa5.14□□□□□ -1.59
SMAD4-216ENST00000593223 IL1RAPL1Q9NZN1 696 aa5.14□□□□□ -1.59
SMAD4-216ENST00000593223 PRXQ9BXM0 1461 aa5.13□□□□□ -1.59
SMAD4-216ENST00000593223 C17orf113A0A1B0GUU1 675 aa5.13□□□□□ -1.59
SMAD4-216ENST00000593223 ARHGAP10A1A4S6 786 aa5.13□□□□□ -1.59
SMAD4-216ENST00000593223 BECN2A8MW95 431 aa5.13□□□□□ -1.59
SMAD4-216ENST00000593223 MS4A18H0YCH9 400 aa5.13□□□□□ -1.59
SMAD4-216ENST00000593223 CHL1O00533 1208 aa5.13□□□□□ -1.59
SMAD4-216ENST00000593223 LIASO43766 372 aa5.13□□□□□ -1.59
SMAD4-216ENST00000593223 CLDN7O95471 211 aa5.13□□□□□ -1.59
SMAD4-216ENST00000593223 NTN1O95631 604 aa5.13□□□□□ -1.59
SMAD4-216ENST00000593223 HOXC13P31276 330 aa5.13□□□□□ -1.59
SMAD4-216ENST00000593223 PGGT1BP53609 377 aa5.13□□□□□ -1.59
SMAD4-216ENST00000593223 LINC00205P59089 165 aa5.13□□□□□ -1.59
SMAD4-216ENST00000593223 ZP1P60852 638 aa5.13□□□□□ -1.59
SMAD4-216ENST00000593223 MAPK7Q13164 816 aa5.13□□□□□ -1.59
SMAD4-216ENST00000593223 FHL1Q13642 323 aa5.13□□□□□ -1.59
SMAD4-216ENST00000593223 DUSP6Q16828 381 aa5.13□□□□□ -1.59
SMAD4-216ENST00000593223 UBAP2Q5T6F2 1119 aaKnown RBP5.13□□□□□ -1.59
SMAD4-216ENST00000593223 PRSS45Q7RTY3 260 aa5.13□□□□□ -1.59
SMAD4-216ENST00000593223 TNIP2Q8NFZ5 429 aa5.13□□□□□ -1.59
SMAD4-216ENST00000593223 OR4N2Q8NGD1 307 aa5.13□□□□□ -1.59
SMAD4-216ENST00000593223 ANP32BQ92688 251 aaKnown RBP5.13□□□□□ -1.59
SMAD4-216ENST00000593223 CCDC34Q96HJ3 373 aa5.13□□□□□ -1.59
SMAD4-216ENST00000593223 APOLD1Q96LR9 279 aa5.13□□□□□ -1.59
SMAD4-216ENST00000593223 CLSTN3Q9BQT9 956 aa5.13□□□□□ -1.59
SMAD4-216ENST00000593223 PHF7Q9BWX1 381 aaPredicted RBP5.13□□□□□ -1.59
SMAD4-216ENST00000593223 UNC45AQ9H3U1 944 aa5.13□□□□□ -1.59
SMAD4-216ENST00000593223 PLAC1Q9HBJ0 212 aa5.13□□□□□ -1.59
SMAD4-216ENST00000593223 WDR6Q9NNW5 1121 aaKnown RBP5.13□□□□□ -1.59
SMAD4-216ENST00000593223 FZD10Q9ULW2 581 aa5.13□□□□□ -1.59
SMAD4-216ENST00000593223 CDC42BPAQ5VT25 1732 aa5.13□□□□□ -1.59
SMAD4-216ENST00000593223 PLEKHG1Q9ULL1 1385 aa5.13□□□□□ -1.59
SMAD4-216ENST00000593223 KIAA1107Q9UPP5 1409 aa5.13□□□□□ -1.59
SMAD4-216ENST00000593223 ADGRB3O60242 1522 aa5.13□□□□□ -1.59
SMAD4-216ENST00000593223 A0A1B0GVC2 190 aa5.12□□□□□ -1.59
SMAD4-216ENST00000593223 TYW5A2RUC4 315 aaKnown RBP5.12□□□□□ -1.59
SMAD4-216ENST00000593223 INSIG1O15503 277 aa5.12□□□□□ -1.59
SMAD4-216ENST00000593223 HOXC11O43248 304 aaPredicted RBP5.12□□□□□ -1.59
SMAD4-216ENST00000593223 BAIAP3O94812 1187 aa5.12□□□□□ -1.59
SMAD4-216ENST00000593223 BAG2O95816 211 aa5.12□□□□□ -1.59
SMAD4-216ENST00000593223 HNRNPA1P09651 372 aaKnown RBP eCLIP5.12□□□□□ -1.59
SMAD4-216ENST00000593223 RFX2P48378 723 aa5.12□□□□□ -1.59
SMAD4-216ENST00000593223 CDH15P55291 814 aa5.12□□□□□ -1.59
SMAD4-216ENST00000593223 VAMP2P63027 116 aa5.12□□□□□ -1.59
SMAD4-216ENST00000593223 ROR1Q01973 937 aa5.12□□□□□ -1.59
SMAD4-216ENST00000593223 ROR2Q01974 943 aaKnown RBP5.12□□□□□ -1.59
SMAD4-216ENST00000593223 GPR68Q15743 365 aa5.12□□□□□ -1.59
SMAD4-216ENST00000593223 TTC31Q49AM3 519 aaPredicted RBP5.12□□□□□ -1.59
SMAD4-216ENST00000593223 FSCBQ5H9T9 825 aa5.12□□□□□ -1.59
SMAD4-216ENST00000593223 DNTTIP2Q5QJE6 756 aaKnown RBP5.12□□□□□ -1.59
SMAD4-216ENST00000593223 FNBP1LQ5T0N5 605 aa5.12□□□□□ -1.59
SMAD4-216ENST00000593223 INTS11Q5TA45 600 aaKnown RBP5.12□□□□□ -1.59
SMAD4-216ENST00000593223 ATG9BQ674R7 924 aa5.12□□□□□ -1.59
SMAD4-216ENST00000593223 C9orf47Q6ZRZ4 202 aa5.12□□□□□ -1.59
SMAD4-216ENST00000593223 ZNF367Q7RTV3 350 aa5.12□□□□□ -1.59
SMAD4-216ENST00000593223 GLCCI1Q86VQ1 547 aa5.12□□□□□ -1.59
SMAD4-216ENST00000593223 MON1AQ86VX9 555 aa5.12□□□□□ -1.59
SMAD4-216ENST00000593223 LURAP1LQ8IV03 231 aa5.12□□□□□ -1.59
SMAD4-216ENST00000593223 AFAP1L1Q8TED9 768 aa5.12□□□□□ -1.59
SMAD4-216ENST00000593223 OIT3Q8WWZ8 545 aa5.12□□□□□ -1.59
SMAD4-216ENST00000593223 INTS2Q9H0H0 1204 aaKnown RBP5.12□□□□□ -1.59
SMAD4-216ENST00000593223 PEMTQ9UBM1 199 aa5.12□□□□□ -1.59
SMAD4-216ENST00000593223 TBX20Q9UMR3 447 aa5.12□□□□□ -1.59
SMAD4-216ENST00000593223 PCDHGB5Q9Y5G0 923 aa5.12□□□□□ -1.59
SMAD4-216ENST00000593223 SRPRBQ9Y5M8 271 aaKnown RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms