RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 IL10RBQ08334 325 aa18.04■□□□□ 0.48
CIRBP-243ENST00000593128 TDRD12Q587J7 1177 aaKnown RBP18.04■□□□□ 0.48
CIRBP-243ENST00000593128 DENND2CQ68D51 928 aa18.04■□□□□ 0.48
CIRBP-243ENST00000593128 GKN2Q86XP6 184 aa18.04■□□□□ 0.48
CIRBP-243ENST00000593128 ARL10Q8N8L6 244 aa18.04■□□□□ 0.48
CIRBP-243ENST00000593128 CCDC74AQ96AQ1 378 aa18.04■□□□□ 0.48
CIRBP-243ENST00000593128 TBATAQ96M53 351 aa18.04■□□□□ 0.48
CIRBP-243ENST00000593128 WDR92Q96MX6 357 aa18.04■□□□□ 0.48
CIRBP-243ENST00000593128 NAP1L5Q96NT1 182 aaPredicted RBP18.04■□□□□ 0.48
CIRBP-243ENST00000593128 EIF3CQ99613 913 aaKnown RBP18.04■□□□□ 0.48
CIRBP-243ENST00000593128 CWC15Q9P013 229 aaKnown RBP18.04■□□□□ 0.48
CIRBP-243ENST00000593128 COL27A1Q8IZC6 1860 aaPredicted RBP18.03■□□□□ 0.48
CIRBP-243ENST00000593128 RP1P56715 2156 aa18.03■□□□□ 0.48
CIRBP-243ENST00000593128 PMS2P1A4D2B8 440 aa18.03■□□□□ 0.48
CIRBP-243ENST00000593128 H3BRJ5 948 aa18.03■□□□□ 0.48
CIRBP-243ENST00000593128 CACNB4O00305 520 aaPredicted RBP18.03■□□□□ 0.48
CIRBP-243ENST00000593128 RECQL5O94762 991 aaPredicted RBP18.03■□□□□ 0.48
CIRBP-243ENST00000593128 ARL4AP40617 200 aa18.03■□□□□ 0.48
CIRBP-243ENST00000593128 ZNF165P49910 485 aa18.03■□□□□ 0.48
CIRBP-243ENST00000593128 MTM1Q13496 603 aa18.03■□□□□ 0.48
CIRBP-243ENST00000593128 ZNF235Q14590 738 aa18.03■□□□□ 0.48
CIRBP-243ENST00000593128 LBRQ14739 615 aaKnown RBP18.03■□□□□ 0.48
CIRBP-243ENST00000593128 ACOX1Q15067 660 aa18.03■□□□□ 0.48
CIRBP-243ENST00000593128 SLC39A7Q92504 469 aa18.03■□□□□ 0.48
CIRBP-243ENST00000593128 TRIM11Q96F44 468 aa18.03■□□□□ 0.48
CIRBP-243ENST00000593128 PDXPQ96GD0 296 aa18.03■□□□□ 0.48
CIRBP-243ENST00000593128 BPIFA3Q9BQP9 254 aa18.03■□□□□ 0.48
CIRBP-243ENST00000593128 CPNE5Q9HCH3 593 aa18.03■□□□□ 0.48
CIRBP-243ENST00000593128 EPB41L5Q9HCM4 733 aa18.03■□□□□ 0.48
CIRBP-243ENST00000593128 MRPL47Q9HD33 250 aaKnown RBP18.03■□□□□ 0.48
CIRBP-243ENST00000593128 MRPL40Q9NQ50 206 aaKnown RBP18.03■□□□□ 0.48
CIRBP-243ENST00000593128 AIPL1Q9NZN9 384 aa18.03■□□□□ 0.48
CIRBP-243ENST00000593128 SEPT3Q9UH03 358 aa18.03■□□□□ 0.48
CIRBP-243ENST00000593128 GOLGA6CA6NDK9 693 aa18.02■□□□□ 0.48
CIRBP-243ENST00000593128 GOLGA6BA6NDN3 693 aa18.02■□□□□ 0.48
CIRBP-243ENST00000593128 TCEA3O75764 348 aa18.02■□□□□ 0.48
CIRBP-243ENST00000593128 GOLGA6DP0CG33 693 aa18.02■□□□□ 0.48
CIRBP-243ENST00000593128 GZMAP12544 262 aa18.02■□□□□ 0.48
CIRBP-243ENST00000593128 AMPD1P23109 780 aa18.02■□□□□ 0.48
CIRBP-243ENST00000593128 SSR1P43307 286 aaKnown RBP18.02■□□□□ 0.48
CIRBP-243ENST00000593128 CSNK1DP48730 415 aa18.02■□□□□ 0.48
CIRBP-243ENST00000593128 ERVPABLB-1P60509 514 aa18.02■□□□□ 0.48
CIRBP-243ENST00000593128 POLR2LP62875 67 aaKnown RBP18.02■□□□□ 0.48
CIRBP-243ENST00000593128 SLC10A7Q0GE19 358 aa18.02■□□□□ 0.48
CIRBP-243ENST00000593128 RALGDSQ12967 914 aa18.02■□□□□ 0.48
CIRBP-243ENST00000593128 RFTN1Q14699 578 aaPredicted RBP18.02■□□□□ 0.48
CIRBP-243ENST00000593128 ARHGAP40Q5TG30 622 aa18.02■□□□□ 0.48
CIRBP-243ENST00000593128 AFMIDQ63HM1 303 aa18.02■□□□□ 0.48
CIRBP-243ENST00000593128 KCTD16Q68DU8 428 aa18.02■□□□□ 0.48
CIRBP-243ENST00000593128 CYP4V2Q6ZWL3 525 aaPredicted RBP18.02■□□□□ 0.48
CIRBP-243ENST00000593128 TAF8Q7Z7C8 310 aa18.02■□□□□ 0.48
CIRBP-243ENST00000593128 SDR16C5Q8N3Y7 309 aa18.02■□□□□ 0.48
CIRBP-243ENST00000593128 Q8N9G6 341 aaPredicted RBP18.02■□□□□ 0.48
CIRBP-243ENST00000593128 OR1E3Q8WZA6 343 aa18.02■□□□□ 0.48
CIRBP-243ENST00000593128 HIC2Q96JB3 615 aa18.02■□□□□ 0.48
CIRBP-243ENST00000593128 ASCL3Q9NQ33 180 aa18.02■□□□□ 0.48
CIRBP-243ENST00000593128 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.02■□□□□ 0.48
CIRBP-243ENST00000593128 GOLGA6AQ9NYA3 693 aa18.02■□□□□ 0.48
CIRBP-243ENST00000593128 SMG1Q96Q15 3661 aaKnown RBP18.01■□□□□ 0.47
CIRBP-243ENST00000593128 A0A1W2PNU3 283 aaPredicted RBP18.01■□□□□ 0.47
CIRBP-243ENST00000593128 A0A1W2PQC6 194 aa18.01■□□□□ 0.47
CIRBP-243ENST00000593128 TMEM202A6NGA9 273 aa18.01■□□□□ 0.47
CIRBP-243ENST00000593128 B4DGG1 531 aa18.01■□□□□ 0.47
CIRBP-243ENST00000593128 DXOO77932 396 aaKnown RBP18.01■□□□□ 0.47
CIRBP-243ENST00000593128 TNFSF15O95150 251 aa18.01■□□□□ 0.47
CIRBP-243ENST00000593128 RPLP0P05388 317 aaKnown RBP18.01■□□□□ 0.47
CIRBP-243ENST00000593128 TCF4P15884 667 aa18.01■□□□□ 0.47
CIRBP-243ENST00000593128 RENBPP51606 427 aa18.01■□□□□ 0.47
CIRBP-243ENST00000593128 TMPRSS3P57727 454 aa18.01■□□□□ 0.47
CIRBP-243ENST00000593128 DPYSQ14117 519 aa18.01■□□□□ 0.47
CIRBP-243ENST00000593128 TMCO4Q5TGY1 634 aa18.01■□□□□ 0.47
CIRBP-243ENST00000593128 TMCO3Q6UWJ1 677 aa18.01■□□□□ 0.47
CIRBP-243ENST00000593128 LIPIQ6XZB0 460 aa18.01■□□□□ 0.47
CIRBP-243ENST00000593128 DPPA4Q7L190 304 aa18.01■□□□□ 0.47
CIRBP-243ENST00000593128 PSTKQ8IV42 348 aaKnown RBP18.01■□□□□ 0.47
CIRBP-243ENST00000593128 OR56A4Q8NGH8 313 aa18.01■□□□□ 0.47
CIRBP-243ENST00000593128 FNIP1Q8TF40 1166 aa18.01■□□□□ 0.47
CIRBP-243ENST00000593128 FUBP1Q96AE4 644 aaKnown RBP18.01■□□□□ 0.47
CIRBP-243ENST00000593128 BTBD6Q96KE9 485 aa18.01■□□□□ 0.47
CIRBP-243ENST00000593128 GFM1Q96RP9 751 aaKnown RBP18.01■□□□□ 0.47
CIRBP-243ENST00000593128 FOXP3Q9BZS1 431 aa18.01■□□□□ 0.47
CIRBP-243ENST00000593128 RABGEF1Q9UJ41 708 aa18.01■□□□□ 0.47
CIRBP-243ENST00000593128 PCDHGC4Q9Y5F7 938 aa18.01■□□□□ 0.47
CIRBP-243ENST00000593128 KIF26BQ2KJY2 2108 aa18.01■□□□□ 0.47
CIRBP-243ENST00000593128 A0A1B0GTH6 734 aa18■□□□□ 0.47
CIRBP-243ENST00000593128 ATXN7O15265 892 aaPredicted RBP18■□□□□ 0.47
CIRBP-243ENST00000593128 CPP00450 1065 aa18■□□□□ 0.47
CIRBP-243ENST00000593128 MYBL1P10243 752 aa18■□□□□ 0.47
CIRBP-243ENST00000593128 IL1R2P27930 398 aa18■□□□□ 0.47
CIRBP-243ENST00000593128 PRKCIP41743 596 aa18■□□□□ 0.47
CIRBP-243ENST00000593128 AP1S1P61966 158 aa18■□□□□ 0.47
CIRBP-243ENST00000593128 CCL7P80098 99 aa18■□□□□ 0.47
CIRBP-243ENST00000593128 NSUN2Q08J23 767 aaKnown RBP eCLIP18■□□□□ 0.47
CIRBP-243ENST00000593128 C19orf57Q0VDD7 668 aa18■□□□□ 0.47
CIRBP-243ENST00000593128 NFKBIBQ15653 356 aa18■□□□□ 0.47
CIRBP-243ENST00000593128 TAF1BQ53T94 588 aaPredicted RBP18■□□□□ 0.47
CIRBP-243ENST00000593128 LVRNQ6Q4G3 990 aa18■□□□□ 0.47
CIRBP-243ENST00000593128 ARL14Q8N4G2 192 aa18■□□□□ 0.47
CIRBP-243ENST00000593128 LZTR1Q8N653 840 aa18■□□□□ 0.47
CIRBP-243ENST00000593128 FAM46DQ8NEK8 389 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms