RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 PFKPQ01813 784 aa19.77■□□□□ 0.76
CLIP3-206ENST00000593074 GALNT3Q14435 633 aa19.77■□□□□ 0.76
CLIP3-206ENST00000593074 RFTN1Q14699 578 aaPredicted RBP19.77■□□□□ 0.76
CLIP3-206ENST00000593074 ULK2Q8IYT8 1036 aa19.77■□□□□ 0.76
CLIP3-206ENST00000593074 PHTF2Q8N3S3 785 aa19.77■□□□□ 0.76
CLIP3-206ENST00000593074 BLOC1S5Q8TDH9 187 aa19.77■□□□□ 0.76
CLIP3-206ENST00000593074 CMTM5Q96DZ9 223 aa19.77■□□□□ 0.76
CLIP3-206ENST00000593074 DNAJC1Q96KC8 554 aaKnown RBP19.77■□□□□ 0.76
CLIP3-206ENST00000593074 FAM161BQ96MY7 647 aa19.77■□□□□ 0.76
CLIP3-206ENST00000593074 OR52B2Q96RD2 323 aa19.77■□□□□ 0.76
CLIP3-206ENST00000593074 UNKQ9C0B0 810 aaKnown RBP19.77■□□□□ 0.76
CLIP3-206ENST00000593074 GPAMQ9HCL2 828 aa19.77■□□□□ 0.76
CLIP3-206ENST00000593074 GKN1Q9NS71 199 aa19.77■□□□□ 0.76
CLIP3-206ENST00000593074 VTI1BQ9UEU0 232 aa19.77■□□□□ 0.76
CLIP3-206ENST00000593074 ZDHHC2Q9UIJ5 367 aa19.77■□□□□ 0.76
CLIP3-206ENST00000593074 VWA7Q9Y334 891 aa19.77■□□□□ 0.76
CLIP3-206ENST00000593074 ACTL7AQ9Y615 435 aa19.77■□□□□ 0.76
CLIP3-206ENST00000593074 OR51F1A6NGY5 319 aa19.77■□□□□ 0.75
CLIP3-206ENST00000593074 MEI4A8MW99 385 aa19.77■□□□□ 0.75
CLIP3-206ENST00000593074 E9PBE3 544 aa19.77■□□□□ 0.75
CLIP3-206ENST00000593074 GRID2O43424 1007 aa19.77■□□□□ 0.75
CLIP3-206ENST00000593074 KLHL41O60662 606 aa19.77■□□□□ 0.75
CLIP3-206ENST00000593074 TFEBP19484 476 aa19.77■□□□□ 0.75
CLIP3-206ENST00000593074 SLC26A3P40879 764 aa19.77■□□□□ 0.75
CLIP3-206ENST00000593074 GJA8P48165 433 aa19.77■□□□□ 0.75
CLIP3-206ENST00000593074 SGSHP51688 502 aa19.77■□□□□ 0.75
CLIP3-206ENST00000593074 OXCT1P55809 520 aa19.77■□□□□ 0.75
CLIP3-206ENST00000593074 MXRA7P84157 204 aa19.77■□□□□ 0.75
CLIP3-206ENST00000593074 NET1Q7Z628 596 aaPredicted RBP19.77■□□□□ 0.75
CLIP3-206ENST00000593074 POU5F2Q8N7G0 328 aa19.77■□□□□ 0.75
CLIP3-206ENST00000593074 SCG3Q8WXD2 468 aaKnown RBP19.77■□□□□ 0.75
CLIP3-206ENST00000593074 CINPQ9BW66 212 aaPredicted RBP19.77■□□□□ 0.75
CLIP3-206ENST00000593074 RNF38Q9H0F5 515 aa19.77■□□□□ 0.75
CLIP3-206ENST00000593074 NCKIPSDQ9NZQ3 722 aa19.77■□□□□ 0.75
CLIP3-206ENST00000593074 A0A1B0GVM2 712 aa19.76■□□□□ 0.75
CLIP3-206ENST00000593074 TCAF2A6NFQ2 919 aa19.76■□□□□ 0.75
CLIP3-206ENST00000593074 H0Y3Z8 333 aa19.76■□□□□ 0.75
CLIP3-206ENST00000593074 DCXO43602 365 aa19.76■□□□□ 0.75
CLIP3-206ENST00000593074 RPP40O75818 363 aaKnown RBP19.76■□□□□ 0.75
CLIP3-206ENST00000593074 CR2P20023 1033 aa19.76■□□□□ 0.75
CLIP3-206ENST00000593074 CDKN2DP55273 166 aa19.76■□□□□ 0.75
CLIP3-206ENST00000593074 NSUN2Q08J23 767 aaKnown RBP eCLIP19.76■□□□□ 0.75
CLIP3-206ENST00000593074 TWF1Q12792 350 aa19.76■□□□□ 0.75
CLIP3-206ENST00000593074 NAA25Q14CX7 972 aa19.76■□□□□ 0.75
CLIP3-206ENST00000593074 KLC3Q6P597 504 aa19.76■□□□□ 0.75
CLIP3-206ENST00000593074 TLDC1Q6P9B6 456 aa19.76■□□□□ 0.75
CLIP3-206ENST00000593074 DNAJB7Q7Z6W7 309 aaPredicted RBP19.76■□□□□ 0.75
CLIP3-206ENST00000593074 SETD3Q86TU7 594 aaPredicted RBP19.76■□□□□ 0.75
CLIP3-206ENST00000593074 TBATAQ96M53 351 aa19.76■□□□□ 0.75
CLIP3-206ENST00000593074 THTPAQ9BU02 230 aa19.76■□□□□ 0.75
CLIP3-206ENST00000593074 POMKQ9H5K3 350 aa19.76■□□□□ 0.75
CLIP3-206ENST00000593074 CORO1CQ9ULV4 474 aaPredicted RBP19.76■□□□□ 0.75
CLIP3-206ENST00000593074 TRIM43BA6NCK2 446 aa19.75■□□□□ 0.75
CLIP3-206ENST00000593074 F8W8V4 182 aa19.75■□□□□ 0.75
CLIP3-206ENST00000593074 GOT2P00505 430 aaKnown RBP19.75■□□□□ 0.75
CLIP3-206ENST00000593074 CCDC166P0CW27 439 aa19.75■□□□□ 0.75
CLIP3-206ENST00000593074 RAG1P15918 1043 aa19.75■□□□□ 0.75
CLIP3-206ENST00000593074 RGRP47804 291 aa19.75■□□□□ 0.75
CLIP3-206ENST00000593074 EPHB3P54753 998 aa19.75■□□□□ 0.75
CLIP3-206ENST00000593074 ACAP2Q15057 778 aa19.75■□□□□ 0.75
CLIP3-206ENST00000593074 ADGRF1Q5T601 910 aa19.75■□□□□ 0.75
CLIP3-206ENST00000593074 FAM45BPQ6NSW5 357 aa19.75■□□□□ 0.75
CLIP3-206ENST00000593074 LDB1Q86U70 411 aaPredicted RBP19.75■□□□□ 0.75
CLIP3-206ENST00000593074 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.75■□□□□ 0.75
CLIP3-206ENST00000593074 TCEAL8Q8IYN2 117 aa19.75■□□□□ 0.75
CLIP3-206ENST00000593074 PNPLA1Q8N8W4 532 aa19.75■□□□□ 0.75
CLIP3-206ENST00000593074 FAM45AQ8TCE6 357 aa19.75■□□□□ 0.75
CLIP3-206ENST00000593074 AUTS2Q8WXX7 1259 aa19.75■□□□□ 0.75
CLIP3-206ENST00000593074 TRIM43Q96BQ3 446 aaPredicted RBP19.75■□□□□ 0.75
CLIP3-206ENST00000593074 CCDC126Q96EE4 140 aa19.75■□□□□ 0.75
CLIP3-206ENST00000593074 CNDP1Q96KN2 507 aa19.75■□□□□ 0.75
CLIP3-206ENST00000593074 ANKRD27Q96NW4 1050 aa19.75■□□□□ 0.75
CLIP3-206ENST00000593074 KLF16Q9BXK1 252 aaPredicted RBP19.75■□□□□ 0.75
CLIP3-206ENST00000593074 SUDS3Q9H7L9 328 aaPredicted RBP19.75■□□□□ 0.75
CLIP3-206ENST00000593074 MRPL17Q9NRX2 175 aaKnown RBP19.75■□□□□ 0.75
CLIP3-206ENST00000593074 TBC1D30Q9Y2I9 924 aa19.75■□□□□ 0.75
CLIP3-206ENST00000593074 C2orf78A6NCI8 922 aa19.75■□□□□ 0.75
CLIP3-206ENST00000593074 RHOCP08134 193 aa19.75■□□□□ 0.75
CLIP3-206ENST00000593074 RBP1P09455 135 aa19.75■□□□□ 0.75
CLIP3-206ENST00000593074 TRMT5Q32P41 509 aaKnown RBP19.75■□□□□ 0.75
CLIP3-206ENST00000593074 MRNIPQ6NTE8 343 aa19.75■□□□□ 0.75
CLIP3-206ENST00000593074 TRIM67Q6ZTA4 783 aa19.75■□□□□ 0.75
CLIP3-206ENST00000593074 CCNYL1Q8N7R7 359 aa19.75■□□□□ 0.75
CLIP3-206ENST00000593074 ANKRD49Q8WVL7 239 aa19.75■□□□□ 0.75
CLIP3-206ENST00000593074 NSMCE3Q96MG7 304 aa19.75■□□□□ 0.75
CLIP3-206ENST00000593074 YME1L1Q96TA2 773 aa19.75■□□□□ 0.75
CLIP3-206ENST00000593074 SPON2Q9BUD6 331 aa19.75■□□□□ 0.75
CLIP3-206ENST00000593074 SLC7A8Q9UHI5 535 aa19.75■□□□□ 0.75
CLIP3-206ENST00000593074 AGO1Q9UL18 857 aaKnown RBP19.75■□□□□ 0.75
CLIP3-206ENST00000593074 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.74■□□□□ 0.75
CLIP3-206ENST00000593074 CCDC162PA2VCL2 907 aa19.74■□□□□ 0.75
CLIP3-206ENST00000593074 CD3EAPO15446 510 aaKnown RBP19.74■□□□□ 0.75
CLIP3-206ENST00000593074 KRT36O76013 467 aa19.74■□□□□ 0.75
CLIP3-206ENST00000593074 PSMG1O95456 288 aa19.74■□□□□ 0.75
CLIP3-206ENST00000593074 GLP2RO95838 553 aa19.74■□□□□ 0.75
CLIP3-206ENST00000593074 ACRP10323 421 aa19.74■□□□□ 0.75
CLIP3-206ENST00000593074 IRF1P10914 325 aa19.74■□□□□ 0.75
CLIP3-206ENST00000593074 HOXB8P17481 243 aaPredicted RBP19.74■□□□□ 0.75
CLIP3-206ENST00000593074 OGNP20774 298 aaKnown RBP19.74■□□□□ 0.75
CLIP3-206ENST00000593074 KLF10Q13118 480 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms