RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 MMEL1Q495T6 779 aa14.36□□□□□ -0.11
RANBP3-229ENST00000592771 SFT2D3Q587I9 215 aa14.36□□□□□ -0.11
RANBP3-229ENST00000592771 CNTN4Q8IWV2 1026 aa14.36□□□□□ -0.11
RANBP3-229ENST00000592771 TNS4Q8IZW8 715 aa14.36□□□□□ -0.11
RANBP3-229ENST00000592771 SLC39A11Q8N1S5 342 aa14.36□□□□□ -0.11
RANBP3-229ENST00000592771 ZNF461Q8TAF7 563 aa14.36□□□□□ -0.11
RANBP3-229ENST00000592771 RPRD1AQ96P16 312 aaPredicted RBP14.36□□□□□ -0.11
RANBP3-229ENST00000592771 LENG8Q96PV6 779 aaPredicted RBP14.36□□□□□ -0.11
RANBP3-229ENST00000592771 HERC2P3Q9BVR0 1158 aa14.36□□□□□ -0.11
RANBP3-229ENST00000592771 SP110Q9HB58 689 aa14.36□□□□□ -0.11
RANBP3-229ENST00000592771 VPS45Q9NRW7 570 aa14.36□□□□□ -0.11
RANBP3-229ENST00000592771 C20orf96Q9NUD7 363 aaPredicted RBP14.36□□□□□ -0.11
RANBP3-229ENST00000592771 HACD3Q9P035 362 aa14.36□□□□□ -0.11
RANBP3-229ENST00000592771 MAGED2Q9UNF1 606 aaPredicted RBP14.36□□□□□ -0.11
RANBP3-229ENST00000592771 COMMD3-BMI1R4GMX3 469 aa14.36□□□□□ -0.11
RANBP3-229ENST00000592771 ANAPC1Q9H1A4 1944 aa14.35□□□□□ -0.11
RANBP3-229ENST00000592771 ABHD14A-ACY1A0A1B0GW23 586 aa14.35□□□□□ -0.11
RANBP3-229ENST00000592771 EME2A4GXA9 379 aaPredicted RBP14.35□□□□□ -0.11
RANBP3-229ENST00000592771 E9PBE3 544 aa14.35□□□□□ -0.11
RANBP3-229ENST00000592771 ACSL4O60488 711 aa14.35□□□□□ -0.11
RANBP3-229ENST00000592771 KLHL41O60662 606 aa14.35□□□□□ -0.11
RANBP3-229ENST00000592771 RAMP2O60895 175 aa14.35□□□□□ -0.11
RANBP3-229ENST00000592771 PMPCBO75439 489 aa14.35□□□□□ -0.11
RANBP3-229ENST00000592771 PPARGP37231 505 aaPredicted RBP14.35□□□□□ -0.11
RANBP3-229ENST00000592771 WNT3AP56704 352 aa14.35□□□□□ -0.11
RANBP3-229ENST00000592771 SLC10A7Q0GE19 358 aa14.35□□□□□ -0.11
RANBP3-229ENST00000592771 CYLC2Q14093 348 aaPredicted RBP14.35□□□□□ -0.11
RANBP3-229ENST00000592771 MARC1Q5VT66 337 aa14.35□□□□□ -0.11
RANBP3-229ENST00000592771 PGAM4Q8N0Y7 254 aa14.35□□□□□ -0.11
RANBP3-229ENST00000592771 PQLC1Q8N2U9 271 aa14.35□□□□□ -0.11
RANBP3-229ENST00000592771 MARVELD2Q8N4S9 558 aa14.35□□□□□ -0.11
RANBP3-229ENST00000592771 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.35□□□□□ -0.11
RANBP3-229ENST00000592771 PSMG2Q969U7 264 aa14.35□□□□□ -0.11
RANBP3-229ENST00000592771 C1QTNF1Q9BXJ1 281 aa14.35□□□□□ -0.11
RANBP3-229ENST00000592771 ZNF385DQ9H6B1 395 aa14.35□□□□□ -0.11
RANBP3-229ENST00000592771 PIDD1Q9HB75 910 aa14.35□□□□□ -0.11
RANBP3-229ENST00000592771 TREX1Q9NSU2 369 aa14.35□□□□□ -0.11
RANBP3-229ENST00000592771 CPSF2Q9P2I0 782 aaKnown RBP14.35□□□□□ -0.11
RANBP3-229ENST00000592771 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.35□□□□□ -0.11
RANBP3-229ENST00000592771 MMP2P08253 660 aa14.35□□□□□ -0.11
RANBP3-229ENST00000592771 ARNTP27540 789 aa14.35□□□□□ -0.11
RANBP3-229ENST00000592771 PEX2P28328 305 aa14.35□□□□□ -0.11
RANBP3-229ENST00000592771 ARCN1P48444 511 aaKnown RBP14.35□□□□□ -0.11
RANBP3-229ENST00000592771 KPNA2P52292 529 aaKnown RBP14.35□□□□□ -0.11
RANBP3-229ENST00000592771 CHN2P52757 468 aa14.35□□□□□ -0.11
RANBP3-229ENST00000592771 POLE2P56282 527 aa14.35□□□□□ -0.11
RANBP3-229ENST00000592771 POLD3Q15054 466 aaPredicted RBP14.35□□□□□ -0.11
RANBP3-229ENST00000592771 SMAD1Q15797 465 aaKnown RBP14.35□□□□□ -0.11
RANBP3-229ENST00000592771 HECTD3Q5T447 861 aa14.35□□□□□ -0.11
RANBP3-229ENST00000592771 KIAA1841Q6NSI8 718 aa14.35□□□□□ -0.11
RANBP3-229ENST00000592771 BNC2Q6ZN30 1099 aaPredicted RBP14.35□□□□□ -0.11
RANBP3-229ENST00000592771 ZC3HC1Q86WB0 502 aaKnown RBP14.35□□□□□ -0.11
RANBP3-229ENST00000592771 CIR1Q86X95 450 aaPredicted RBP14.35□□□□□ -0.11
RANBP3-229ENST00000592771 PPHLN1Q8NEY8 458 aaKnown RBP14.35□□□□□ -0.11
RANBP3-229ENST00000592771 ADCY4Q8NFM4 1077 aa14.35□□□□□ -0.11
RANBP3-229ENST00000592771 MAPK15Q8TD08 544 aa14.35□□□□□ -0.11
RANBP3-229ENST00000592771 DIS3LQ8TF46 1054 aaKnown RBP14.35□□□□□ -0.11
RANBP3-229ENST00000592771 STYXQ8WUJ0 223 aa14.35□□□□□ -0.11
RANBP3-229ENST00000592771 ARMC5Q96C12 935 aa14.35□□□□□ -0.11
RANBP3-229ENST00000592771 CCDC124Q96CT7 223 aaKnown RBP14.35□□□□□ -0.11
RANBP3-229ENST00000592771 TRMT2BQ96GJ1 504 aaKnown RBP14.35□□□□□ -0.11
RANBP3-229ENST00000592771 ZNF558Q96NG5 402 aa14.35□□□□□ -0.11
RANBP3-229ENST00000592771 FSD1LQ9BXM9 530 aa14.35□□□□□ -0.11
RANBP3-229ENST00000592771 NT5MQ9NPB1 228 aa14.35□□□□□ -0.11
RANBP3-229ENST00000592771 MRPL40Q9NQ50 206 aaKnown RBP14.35□□□□□ -0.11
RANBP3-229ENST00000592771 IARS2Q9NSE4 1012 aaKnown RBP14.35□□□□□ -0.11
RANBP3-229ENST00000592771 TMEM39AQ9NV64 488 aa14.35□□□□□ -0.11
RANBP3-229ENST00000592771 RAB26Q9ULW5 256 aa14.35□□□□□ -0.11
RANBP3-229ENST00000592771 DTNAQ9Y4J8 743 aa14.35□□□□□ -0.11
RANBP3-229ENST00000592771 F5H5T6 163 aa14.34□□□□□ -0.11
RANBP3-229ENST00000592771 NPHS1O60500 1241 aa14.34□□□□□ -0.11
RANBP3-229ENST00000592771 PRAMEF11O60813 436 aa14.34□□□□□ -0.11
RANBP3-229ENST00000592771 GJB5O95377 273 aa14.34□□□□□ -0.11
RANBP3-229ENST00000592771 TFEBP19484 476 aa14.34□□□□□ -0.11
RANBP3-229ENST00000592771 GSTT1P30711 240 aa14.34□□□□□ -0.11
RANBP3-229ENST00000592771 SLC6A4P31645 630 aa14.34□□□□□ -0.11
RANBP3-229ENST00000592771 ALDH1A3P47895 512 aa14.34□□□□□ -0.11
RANBP3-229ENST00000592771 HSPA13P48723 471 aa14.34□□□□□ -0.11
RANBP3-229ENST00000592771 AQP4P55087 323 aa14.34□□□□□ -0.11
RANBP3-229ENST00000592771 IHHQ14623 411 aa14.34□□□□□ -0.11
RANBP3-229ENST00000592771 POU6F1Q14863 301 aa14.34□□□□□ -0.11
RANBP3-229ENST00000592771 LSM12Q3MHD2 195 aaKnown RBP14.34□□□□□ -0.11
RANBP3-229ENST00000592771 TCHHL1Q5QJ38 904 aaPredicted RBP14.34□□□□□ -0.11
RANBP3-229ENST00000592771 RARS2Q5T160 578 aaKnown RBP14.34□□□□□ -0.11
RANBP3-229ENST00000592771 LPCAT4Q643R3 524 aa14.34□□□□□ -0.11
RANBP3-229ENST00000592771 TMEM151AQ8N4L1 468 aa14.34□□□□□ -0.11
RANBP3-229ENST00000592771 ARRDC2Q8TBH0 407 aa14.34□□□□□ -0.11
RANBP3-229ENST00000592771 PLD4Q96BZ4 506 aa14.34□□□□□ -0.11
RANBP3-229ENST00000592771 ZNF512Q96ME7 567 aaPredicted RBP14.34□□□□□ -0.11
RANBP3-229ENST00000592771 KLHL5Q96PQ7 755 aa14.34□□□□□ -0.11
RANBP3-229ENST00000592771 OR52B2Q96RD2 323 aa14.34□□□□□ -0.11
RANBP3-229ENST00000592771 RANBP9Q96S59 729 aa14.34□□□□□ -0.11
RANBP3-229ENST00000592771 DDX50Q9BQ39 737 aaKnown RBP14.34□□□□□ -0.11
RANBP3-229ENST00000592771 PRKD2Q9BZL6 878 aa14.34□□□□□ -0.11
RANBP3-229ENST00000592771 TASP1Q9H6P5 420 aa14.34□□□□□ -0.11
RANBP3-229ENST00000592771 PDFQ9HBH1 243 aa14.34□□□□□ -0.11
RANBP3-229ENST00000592771 PLK2Q9NYY3 685 aa14.34□□□□□ -0.11
RANBP3-229ENST00000592771 CDYLQ9Y232 598 aa14.34□□□□□ -0.11
RANBP3-229ENST00000592771 ATP11BQ9Y2G3 1177 aa14.34□□□□□ -0.11
RANBP3-229ENST00000592771 YIPF1Q9Y548 306 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms